; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G035480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G035480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description50S ribosomal protein L33, chloroplastic
Genome locationCicolChr02:31258413..31258613
RNA-Seq ExpressionCcUC02G035480
SyntenyCcUC02G035480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO22192.1 ribosomal protein L33 [Cucurbita foetidissima]4.7e-2487.88Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ES+GISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
QJF46404.1 ribosomal protein L33 [Cucumis melo]3.6e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
YP_004841804.1 ribosomal protein L33 [Cucumis melo subsp. melo]3.6e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
YP_009430648.1 ribosomal protein L33 [Gynostemma cardiospermum]3.6e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
YP_009447471.1 ribosomal protein L33 [Cucurbita maxima]4.7e-2487.88Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ES+GISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
TrEMBL top hitse value%identityAlignment
A0A109WXY7 50S ribosomal protein L33, chloroplastic1.7e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
A0A249RZI5 50S ribosomal protein L33, chloroplastic1.7e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
A0A286NFR9 50S ribosomal protein L33, chloroplastic1.7e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
G3ETR8 50S ribosomal protein L33, chloroplastic1.7e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
X2EY68 50S ribosomal protein L33, chloroplastic1.7e-2489.39Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
SwissProt top hitse value%identityAlignment
A4QKL3 50S ribosomal protein L33, chloroplastic2.2e-2481.82Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RVT+ILECT C       ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
A4QKV2 50S ribosomal protein L33, chloroplastic2.2e-2481.82Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RVT+ILECT C       ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
B1A956 50S ribosomal protein L33, chloroplastic7.5e-2583.33Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVT+ILECT C       ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Q09WZ6 50S ribosomal protein L33, chloroplastic1.7e-2481.82Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVT+ILECT C       ES GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGE+KK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Q2QD68 50S ribosomal protein L33, chloroplastic1.1e-2687.88Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKDARVTVILECTRC       +SIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
Arabidopsis top hitse value%identityAlignment
ATCG00640.1 ribosomal protein L333.5e-2580.3Show/hide
Query:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK
        MAKGKD RVT+ILECT C       E+ GISRYITQKNRHNTPSRLELRKFCP CYKHTIHGEIKK
Subjt:  MAKGKDARVTVILECTRC-------ESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCGTTGTGAATCCATCGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAG
TCGATTGGAATTGAGAAAATTCTGTCCCCGTTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGGTAAAGATGCCCGAGTAACAGTTATTTTGGAATGTACTCGTTGTGAATCCATCGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAG
TCGATTGGAATTGAGAAAATTCTGTCCCCGTTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG
Protein sequenceShow/hide protein sequence
MAKGKDARVTVILECTRCESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK