; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G035780 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G035780
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionglucan endo-1,3-beta-glucosidase 3-like
Genome locationCicolChr02:31567739..31574202
RNA-Seq ExpressionCcUC02G035780
SyntenyCcUC02G035780
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044965 - Glycoside hydrolase family 17, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054595.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo var. makuwa]1.2e-6992.21Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP QKQG+QFR A RK ST QKDITTPITTVPTINIPTIPIINPTSSNPDTVSP MTTPSFTPAT+ +GGSSWCIAS SASQAALQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQAGGNCYNPNSVRDHASYAFN+YYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

XP_008456350.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo]1.2e-6992.21Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP QKQG+QFR A RK ST QKDITTPITTVPTINIPTIPIINPTSSNPDTVSP MTTPSFTPAT+ +GGSSWCIAS SASQAALQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQAGGNCYNPNSVRDHASYAFN+YYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

XP_011656991.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X1 [Cucumis sativus]2.6e-6991.56Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP+QKQG+QFR ASRK ST QKDITTPITTVPTINIPTIPIINP SSNPDTVSP MTTPSFTP+T+ SGGSSWCIAS SASQAALQLALDYACG+
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

XP_011656992.1 major pollen allergen Ole e 10 isoform X2 [Cucumis sativus]2.6e-6991.56Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP+QKQG+QFR ASRK ST QKDITTPITTVPTINIPTIPIINP SSNPDTVSP MTTPSFTP+T+ SGGSSWCIAS SASQAALQLALDYACG+
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

XP_038900832.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Benincasa hispida]1.2e-6689.68Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPA-TSASGGSSWCIASLSASQAALQLALDYACG
        GSSR DP+QKQGQQF    RK S++QKDITTPITTVPT+NIPT+PIINPTSSNPDTVSP MTTPSFTPA T+ASGGSSWCIAS+SASQAALQLALDYACG
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPA-TSASGGSSWCIASLSASQAALQLALDYACG

Query:  MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTA+ITSTNP
Subjt:  MGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

TrEMBL top hitse value%identityAlignment
A0A0A0KDA3 X8 domain-containing protein1.3e-6991.56Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP+QKQG+QFR ASRK ST QKDITTPITTVPTINIPTIPIINP SSNPDTVSP MTTPSFTP+T+ SGGSSWCIAS SASQAALQLALDYACG+
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQ GGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

A0A1S4E1R5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.7e-7092.21Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP QKQG+QFR A RK ST QKDITTPITTVPTINIPTIPIINPTSSNPDTVSP MTTPSFTPAT+ +GGSSWCIAS SASQAALQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQAGGNCYNPNSVRDHASYAFN+YYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

A0A5A7ULQ0 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.7e-7092.21Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP QKQG+QFR A RK ST QKDITTPITTVPTINIPTIPIINPTSSNPDTVSP MTTPSFTPAT+ +GGSSWCIAS SASQAALQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCSSIQAGGNCYNPNSVRDHASYAFN+YYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

A0A6J1FWZ7 major pollen allergen Ole e 10-like5.3e-6083.77Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP+QKQG ++R AS   STHQKDITTPITTVPTINI       PT+SNPD+VSPT+TTPSFTPAT+A+GGSSWCIASL ASQA LQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCS+IQ GG+CYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

A0A6J1JFA6 major pollen allergen Ole e 10-like1.6e-5983.12Show/hide
Query:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM
        GSSRADP+QKQG ++R AS   STHQKDITTPITTVPTINI       PT+SNPD+VSPT+TTPSFTPAT+ +GGSSWCIA+L ASQAALQLALDYACGM
Subjt:  GSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGM

Query:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        GGADCS+IQ GG CYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
Subjt:  GGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 11.9e-1446.08Show/hide
Query:  TTPSFTPATSASG--------GSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQK-NPLPNSCNFGGTAVITST
        +TP +    S SG          ++CIA        LQ ALD+ACG G ++CS IQ G +CY PN+V+ HAS+AFNSYYQK      SC+F G A+IT+T
Subjt:  TTPSFTPATSASG--------GSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQK-NPLPNSCNFGGTAVITST

Query:  NP
        +P
Subjt:  NP

P52409 Glucan endo-1,3-beta-glucosidase1.9e-1442.72Show/hide
Query:  TVSPTMT---TPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPN-SCNFGGTAVITS
        +V+PT +   +P+ +P  + SGG  WC+A   A+   LQ  ++YACG    DC  IQ+GG C++PNS++ HASY  N+YYQ N   + +C+F GT ++TS
Subjt:  TVSPTMT---TPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPN-SCNFGGTAVITS

Query:  TNP
        ++P
Subjt:  TNP

Q84V39 Major pollen allergen Ole e 109.2e-1743.22Show/hide
Query:  TINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-KNP
        T  +P  P+  PT S P + SP        P     G   WC+    A+ A LQ  +DY C   G DC  IQA G C+NPN+VR HASYA NS+YQ K  
Subjt:  TINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-KNP

Query:  LPNSCNFGGTAVITSTNP
            C+F GT  ITS++P
Subjt:  LPNSCNFGGTAVITSTNP

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 51.5e-1448.72Show/hide
Query:  WCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKN-PLPNSCNFGGTAVITSTNP
        WC+A  +A  ++LQ A+++ACG GGADC  IQ GG C +P  V+  AS+ FN+YY KN     +CNF   A +TS NP
Subjt:  WCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKN-PLPNSCNFGGTAVITSTNP

Q9SD84 PLASMODESMATA CALLOSE-BINDING PROTEIN 21.9e-1448.75Show/hide
Query:  SSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-KNPLPNSCNFGGTAVITSTNP
        +SWC+     S + LQ  LDYACG  GADC+     G+C+NP++VR H +YA NS++Q K     SCNF GTA +T+T+P
Subjt:  SSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQ-KNPLPNSCNFGGTAVITSTNP

Arabidopsis top hitse value%identityAlignment
AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein3.2e-2546.67Show/hide
Query:  ITTPITTVP----------TINIPTI------PIINPTSSNPDTVSPTMTTPSFTPATS--------ASGGSSWCIASLSASQAALQLALDYACGMGGAD
        I  P+TT+P          TI  PT+      P+ NP +  P T  P+ T P   P  +        +  G SWC+A   ASQ +LQ ALDYACG+  AD
Subjt:  ITTPITTVP----------TINIPTI------PIINPTSSNPDTVSPTMTTPSFTPATS--------ASGGSSWCIASLSASQAALQLALDYACGMGGAD

Query:  CSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        CS +Q GGNCY+P S++ HAS+AFNSYYQKNP P SC+FGG A + +TNP
Subjt:  CSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein3.8e-2662.5Show/hide
Query:  TPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        T A    G   WCIA  +AS  +LQ+ALDYACG GGADC  IQ G  CY PN++RDHAS+AFNSYYQK+P  +SCNFGG A +TST+P
Subjt:  TPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

AT2G30933.1 Carbohydrate-binding X8 domain superfamily protein7.2e-3353.96Show/hide
Query:  ASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNP
        A  +P   +KDITTP+ T PT   PT  + N  S      +  +T PS     +  G  SWC+A  + ++ ALQ ALDYACG+GGADCS IQ GGNCYNP
Subjt:  ASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNP

Query:  NSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPIL
        NS+R HAS+AFNSYYQKNP+P+SCNF GTA+  S +P L
Subjt:  NSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPIL

AT2G30933.2 Carbohydrate-binding X8 domain superfamily protein1.2e-3254.01Show/hide
Query:  ASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNP
        A  +P   +KDITTP+ T PT   PT  + N  S      +  +T PS     +  G  SWC+A  + ++ ALQ ALDYACG+GGADCS IQ GGNCYNP
Subjt:  ASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNP

Query:  NSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP
        NS+R HAS+AFNSYYQKNP+P+SCNF GTA+  S +P
Subjt:  NSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNP

AT5G55180.1 O-Glycosyl hydrolases family 17 protein1.0e-1848.6Show/hide
Query:  PTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPL-PNSCNFGGTA
        P + N + V P    PS         G +WC+A+   ++  LQ  LDYACG GGADC  IQ G  CYNP S+  HASYAFNSYYQKN     +CNFGG A
Subjt:  PTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSIQAGGNCYNPNSVRDHASYAFNSYYQKNPL-PNSCNFGGTA

Query:  VITSTNP
         + S  P
Subjt:  VITSTNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAACAGCATCCCGAAAACCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGAC
AGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCAAGCTTTACACCGGCAACCAGCG
CGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGTGGTGCCGATTGCTCGTCGATT
CAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGG
CACTGCCGTGATCACCAGCACCAATCCCATTTTGAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTTCATCAAGAGCAGATCCTTCACAAAAACAGGGGCAGCAATTCAGAACAGCATCCCGAAAACCTTCGACTCATCAAAAGGACATCACGACTCCAATAACGAC
AGTCCCAACAATCAACATCCCAACCATTCCCATCATAAACCCTACGAGTTCGAACCCCGACACCGTCTCCCCAACCATGACGACCCCAAGCTTTACACCGGCAACCAGCG
CGAGCGGTGGCTCCAGCTGGTGCATTGCGAGTCTAAGCGCGTCGCAGGCGGCGCTGCAATTAGCTCTGGACTACGCGTGCGGCATGGGTGGTGCCGATTGCTCGTCGATT
CAAGCCGGCGGAAACTGCTACAACCCTAATTCGGTTCGAGACCATGCTTCTTACGCGTTCAATAGCTATTACCAGAAGAATCCGCTTCCGAATAGCTGTAATTTTGGAGG
CACTGCCGTGATCACCAGCACCAATCCCATTTTGAATTTTTAA
Protein sequenceShow/hide protein sequence
MGGSSRADPSQKQGQQFRTASRKPSTHQKDITTPITTVPTINIPTIPIINPTSSNPDTVSPTMTTPSFTPATSASGGSSWCIASLSASQAALQLALDYACGMGGADCSSI
QAGGNCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPILNF