; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G036630 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G036630
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationCicolChr02:32408497..32413927
RNA-Seq ExpressionCcUC02G036630
SyntenyCcUC02G036630
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]8.7e-7090.97Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        M SS   SRPDLP+ PNRGKFQS+TE LS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]8.7e-7090.97Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        M SSS  SRPDLP+ PNR KFQSETE L++DVGGLE SLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
         TTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]1.5e-6688.39Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        MNS S  SR  LP   NRGKFQSE E LS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]2.0e-6688.39Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        MNS S  SR  LP   NRGKFQSE E LS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]1.7e-7393.55Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        MNSSS PSRPDLP+APNRGKFQSETE L+++VGGLE SLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLL DAVN GVQ+SFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 14.2e-7090.97Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        M SS   SRPDLP+ PNRGKFQS+TE LS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 13.0e-5277.33Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        M SS   SRPDLP+ PNRGKFQS+TE LS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLLVD VN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH
        ATTIARFTKQTDQWLAATHALNTAVK  G  +  +  +  +  SI   +H
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 11.0e-6383.23Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        M+S S PSRP LP+A NRG  QSETE LSS+ GGLE SLLQMV+DH +ASLKLR++SEKAKKDAIQKAVRVSDLLV AVN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A TI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 17.5e-6788.39Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        MNS S  SR  LP   NRGKFQSE E LS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDLLVDAVN GVQESFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 11.8e-6587.1Show/hide
Query:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL
        MNS S  SR   P A NRGKFQSE E LS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKA+RVSDLLVDAVN GVQ SFVNQKLIELEIRAL
Subjt:  MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 12.2e-3964.46Show/hide
Query:  LEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENW
        LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVN GV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW
Subjt:  LEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENW

Query:  IKTIDFDCKSITTAIHNIYQD
        +KT++FDCK IT AI NI++D
Subjt:  IKTIDFDCKSITTAIHNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 16.2e-1835.34Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 11.5e-1938.79Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T  A+F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 16.2e-1835.34Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 16.2e-1842.61Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L ++V DH     KL+E +E  KK+AI     V++ L+D+VN GV   F NQK +E E R L    A+F+KQT+QW+      N ++KEIGD ENW K I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIY
        + D  +I+  I  +Y
Subjt:  DFDCKSITTAIHNIY

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein1.5e-4064.46Show/hide
Query:  LEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENW
        LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVN GV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW
Subjt:  LEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENW

Query:  IKTIDFDCKSITTAIHNIYQD
        +KT++FDCK IT AI NI++D
Subjt:  IKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGTCGGTGCCATCACGGCCGGACCTCCCCATAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGATATTGAGCTCCGACGTTGGTGGATTGGAAGG
TTCATTGCTTCAGATGGTCAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAAAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTTTAGTCGATGCCGTGAATCGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTAATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAG
ACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTAC
AGCCATCCATAACATTTATCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
CGTGAAATGTGAAGACAGAATATTTCGCGGGGCGAACATGAATTCTTCGTCGGTGCCATCACGGCCGGACCTCCCCATAGCACCTAATCGCGGGAAGTTTCAATCGGAGA
CGGAGATATTGAGCTCCGACGTTGGTGGATTGGAAGGTTCATTGCTTCAGATGGTCAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAA
AAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATCGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTAATTGAGCTCGAAATTAG
GGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGA
TAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCATAACATTTATCAAGACTGAAATGCTTGTAGTTAAAGAGTCAACCAGAGTGTATTCTGTGGAGTC
GAGAAAAACATAGAACCTCATCCTCTGCTTTAAGCTGAATCTGTGCCCCCATATATGGCTTGATAAGTTCTTGCGGTATAAGGATATGAAGGGTCCAGCATGTCTAGATG
GAAACTCTTACAGAAACTTAGAACACCCCTGTCACTTGACATGTCTGCTACTTCGCTAACTCTATGAAATAATTCGTGGACTCTGGTTTTTTAGTTCACTGATTTATTCC
ACGTTAGCACAGTGCATGTTACCATTTTCTCTATTTAGTGCTCATGTAAACTGCAGTTTTTTTTGTACAATTATTAGCAGCTGCCATGAAATAATAATTTCTACATTCTT
TCAATTTTCTGAATCCATATTATACTCTCACCATTAATATTCTGCTTCATAATTATCAGACATATTATCGTATTAGGTGGGTTCACATTCACAATGTTTAAGTTCTCTCT
CCTGACCAAGAACAATGTTGCCACTTGGCGGTTGCATTTACCTTTTACATGGTTTTTTCCCCCCAACAGATGACTTTATCTTTGTTGACATACTCAACCACTATCATTTC
CTAGCGTCTGAAGGTCCCGTTTTGTTATACTTCAACCAAAAAGAGGCCCAGGATTGAGCTGAACCCGCTGACGATTCCGATGTGATTGCTTTCTACGTTAATTCTGGATT
CATCTTGGCTTGGACATCAACAGCTCTCAGTTTTGGATTTGTAGAATACTCATTTCGACTTCTGAGGGAAAAAAAGTGTGGATAACGACAGTTGGATGGAGGAATGGGGC
AACTGTGGTAGGTAAGGCAAATCCAAAGCTTTAAAACAAGTTTGTCAAAGACCAACCTAATCTGCGCTCATCAGGAACAGTTGACTTAGCCGTGAAGGATGGAGTGTTTC
ACAAGTTGATCAATTGCCAACGTTTTAATATAAATTTGGTCAAAACCAAGCTTGAGTTTTGTGTCTCTTTGTAAGGCATTGACCCTCTCTCTTAAATGACACTTTATTAT
TCCTCTTTCAGGCCAAGTCATAGGTTCGAAACTTTAAATATCCAGGAGGTGTTGCTAAAATGAGCATAGTTCAACTGACATAAACTAATACTATCAACCTTGAAGTTTGA
GGTTTGATTTTTTCATCCCATATATTGTCAAAAGAAGC
Protein sequenceShow/hide protein sequence
MNSSSVPSRPDLPIAPNRGKFQSETEILSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNRGVQESFVNQKLIELEIRALATTIARFTKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD