; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G036660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G036660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionWRKY transcription factor WRKY24-like isoform X1
Genome locationCicolChr02:32437191..32442996
RNA-Seq ExpressionCcUC02G036660
SyntenyCcUC02G036660
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059948.1 putative WRKY transcription factor 26 [Cucumis melo var. makuwa]2.2e-1163.89Show/hide
Query:  MEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS
        MEF FS+ ++ DPSGG   G RR P+            PPLSPPLYSPSSFFTIPPGISPTQ L SPLLLNS
Subjt:  MEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS

KAG7023933.1 WRKY transcription factor WRKY24 [Cucurbita argyrosperma subsp. argyrosperma]8.3e-1145.97Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR
        MVMEF FSS   ED    PT G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +      +G  + GH 
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR

Query:  ----RLPEHVAAAMSKPPLLPPLS
            +  +H  A  S P   P  S
Subjt:  ----RLPEHVAAAMSKPPLLPPLS

XP_008463823.1 PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 26, partial [Cucumis melo]1.4e-1062.32Show/hide
Query:  LFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS
        +F S ++ DPSGG   G RR P+            PPLSPPLYSPSSFFTIPPGISPTQ L SPLLLNS
Subjt:  LFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS

XP_023007167.1 WRKY transcription factor WRKY24-like isoform X1 [Cucurbita maxima]1.4e-1045.16Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR
        MVMEF FSS   EDP+     G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +      +G  + GH 
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR

Query:  ----RLPEHVAAAMSKPPLLPPLS
            +  +H  A  S P   P  S
Subjt:  ----RLPEHVAAAMSKPPLLPPLS

XP_023007168.1 WRKY transcription factor WRKY24-like isoform X2 [Cucurbita maxima]1.4e-1045.16Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR
        MVMEF FSS   EDP+     G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +      +G  + GH 
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR

Query:  ----RLPEHVAAAMSKPPLLPPLS
            +  +H  A  S P   P  S
Subjt:  ----RLPEHVAAAMSKPPLLPPLS

TrEMBL top hitse value%identityAlignment
A0A1S3CK37 LOW QUALITY PROTEIN: probable WRKY transcription factor 266.9e-1162.32Show/hide
Query:  LFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS
        +F S ++ DPSGG   G RR P+            PPLSPPLYSPSSFFTIPPGISPTQ L SPLLLNS
Subjt:  LFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS

A0A5D3C8H6 Putative WRKY transcription factor 261.1e-1163.89Show/hide
Query:  MEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS
        MEF FS+ ++ DPSGG   G RR P+            PPLSPPLYSPSSFFTIPPGISPTQ L SPLLLNS
Subjt:  MEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNS

A0A6J1G8U6 WRKY transcription factor WRKY24-like isoform X11.2e-1045.53Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPHDPSGGPTFGHRRLPE
        MVMEF FSS   ED    PT G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +     PT G      
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPHDPSGGPTFGHRRLPE

Query:  HVAAAMSKPPLLPPLSPPLYSPS
        H      +   L   S P  +P+
Subjt:  HVAAAMSKPPLLPPLSPPLYSPS

A0A6J1KXX3 WRKY transcription factor WRKY24-like isoform X16.9e-1145.16Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR
        MVMEF FSS   EDP+     G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +      +G  + GH 
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR

Query:  ----RLPEHVAAAMSKPPLLPPLS
            +  +H  A  S P   P  S
Subjt:  ----RLPEHVAAAMSKPPLLPPLS

A0A6J1L6Z2 WRKY transcription factor WRKY24-like isoform X26.9e-1145.16Show/hide
Query:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR
        MVMEF FSS   EDP+     G  RLPE  A  +S          PPLL  +S PL+SPSSFFTIPPGISPTQ L SP+LL S +      +G  + GH 
Subjt:  MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMS---------KPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPH----DPSGGPTFGHR

Query:  ----RLPEHVAAAMSKPPLLPPLS
            +  +H  A  S P   P  S
Subjt:  ----RLPEHVAAAMSKPPLLPPLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATGGAGTTTTTGTTCTCTAGTAATTCTGTAGAGGATCCTAGTGGCGGCCCAACCTTTGGCCATCGGAGACTGCCGGAGCATGTGGCGGCCGCGATGTCTAAACC
GCCATTGCTCCCGCCCTTGTCTCCACCTCTTTACTCTCCTTCTTCCTTCTTCACTATCCCCCCTGGTATCAGCCCCACCCAATTTCTTCACTCCCCTCTCCTCCTAAACT
CTCCTCATGATCCTAGTGGCGGCCCAACCTTTGGCCATCGGAGACTGCCGGAGCATGTGGCGGCCGCGATGTCTAAACCGCCATTGCTCCCGCCCTTGTCTCCACCTCTT
TACTCTCCTTCTTCCTTCTTCACTATCCCCCCTGATTCTGCCATCGCCGTCTACCGGAGCAATATCCGCAGGAGATTTGACCGGAACCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATAACATAACCCATTTTCTTCTTCTTCTTCTCGAATTTTGTGTGTTTTCTCTTGGATTCTTCAACTCATCTCCCATGGTTATGGAGTTTTTGTTCTCTAGTAATTCTGTA
GAGGATCCTAGTGGCGGCCCAACCTTTGGCCATCGGAGACTGCCGGAGCATGTGGCGGCCGCGATGTCTAAACCGCCATTGCTCCCGCCCTTGTCTCCACCTCTTTACTC
TCCTTCTTCCTTCTTCACTATCCCCCCTGGTATCAGCCCCACCCAATTTCTTCACTCCCCTCTCCTCCTAAACTCTCCTCATGATCCTAGTGGCGGCCCAACCTTTGGCC
ATCGGAGACTGCCGGAGCATGTGGCGGCCGCGATGTCTAAACCGCCATTGCTCCCGCCCTTGTCTCCACCTCTTTACTCTCCTTCTTCCTTCTTCACTATCCCCCCTGAT
TCTGCCATCGCCGTCTACCGGAGCAATATCCGCAGGAGATTTGACCGGAACCAGTAACAATTCCGGCCACCATCAACAGAACATCAAACAAGAACACAACAACTTTACTG
AATTCTCATTTCTTCGTACTCATCACACCACAAGATCTTCATCATCATCAATGTTTCAACCCTCTTCACCAGTGCAAAGTCAGCGATGGGGTTGTGAAGCCGCCATGAAC
GGCGGCTCCGAAGCCGAGCAGCGGGCAGAATGGGAGTTGAGAAAACGAGGAACTGAGGATGGGTTTAATTGGAGAAAATATGGGCAAAAAGTAGTAAAAGGAAGTGAAAA
TCCGAGAAGCTATTACAAATGTACATACCCAAATTGCCCTGTAAGAAAGCAAGTTGAAAGATCATTGAATGGTCAAATTACTGAAATTGTTTACAAAAGTAAACATAACC
ATCCTAAACCAGACTTCACAAGAAGGTCATCATCGTCTTTTTCTTCTTCTTCTTCTTCATTGTTATCAGAAGCTTTACCTGCAACTATGGCGGCAGAGCCAAAGTATTCA
ATTGCCTCTGATTCCCTCACCACGCCGGAGAATTCTTCAATCACGATTGGGGATGATGATGATTCCCACGAAGCTGATGCAAAAAGATGGAAAAGTGAGAGTGAGAAGGA
AATTATGTCTCCAGTAGGAGGAGGGAAAACAGTGAGAGAACAAAGGGTTGTAGTTCAAACAATTAGCAATGTGGATAAATTAGATGATGGATATTGGTGGAGAAAATATG
GACAGAAAGTGGTCAAGGGAAATTCAAATCCAAGGAGCTATTACAAGTGCACATATGCAGGATGTGGAGTGAGAAAGCACATAGAGAGAGCATCCCACGATATAAGGGCA
GTCATCACTACCTACGAAGGAAAGCACAACCACGAAGTTCCGGTAGCCCGTGGCGGCGGCGGCGGTAGACCGATACTTATTAGTAGTGAAGGAAGTAATAATGATGTTGC
ATCGAACGGCGGTGGCAACCGACGACCGAGTTCAGAGATCTGTAGTGGTAAGAATGGATTGTGGGAGTTGACAAACATGGTGTGGAGGAGCAAAGAAGAAGCCGTCGATG
ACATATTTATGGATTTGTTATTAGATTGATAAATACTTTTTGTCACAAAATAACTTCTTTGTGTCAACCATATACTTAACCAATTCATATTTAATTTGTTCTCTAACCTT
AATTTACTAAAAATATTCATAGGCT
Protein sequenceShow/hide protein sequence
MVMEFLFSSNSVEDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPLYSPSSFFTIPPGISPTQFLHSPLLLNSPHDPSGGPTFGHRRLPEHVAAAMSKPPLLPPLSPPL
YSPSSFFTIPPDSAIAVYRSNIRRRFDRNQ