CuGenDBv2

Gene ID	CcUC02G037590
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Rab5-interacting
Genome location	CicolChr02:33176234..33177849
RNA-Seq Expression	CcUC02G037590
Synteny	CcUC02G037590
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061904.1 Rab5-interacting [Cucumis melo var. makuwa]

2.1e-59

90.08

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASFCYEVQFIQDWS
        HGALLQEGLFASITLFL     E  F   +S
Subjt:  HGALLQEGLFASITLFLASFCYEVQFIQDWS

XP_004143124.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

6.1e-59

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

4.7e-59

95.83

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

XP_022986965.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

1.8e-58

93.33

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK++KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

2.1e-59

95.83

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK++KPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

2.9e-59

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

2.3e-59

95.83

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

A0A5A7V3N1 Rab5-interacting

1.0e-59

90.08

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASFCYEVQFIQDWS
        HGALLQEGLFASITLFL     E  F   +S
Subjt:  HGALLQEGLFASITLFLASFCYEVQFIQDWS

A0A5D3DK85 Rab5-interacting

2.3e-59

95.83

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK+AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

A0A6J1JFH8 uncharacterized protein C20orf24 homolog

8.6e-59

93.33

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Query:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        MK++KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLASF
        HGALLQEGLFASITLFL ++
Subjt:  HGALLQEGLFASITLFLASF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.1e-15

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Q9CQT9 Respirasome Complex Assembly Factor 1

2.5e-15

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

7.7e-44

66.13

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Query:  MKDAKPVKFNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE
        MK+ K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FLAIS+ +VYGYYA++LK+DEE
Subjt:  MKDAKPVKFNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLASF
        +FGGH ALLQ+GLFAS++LFL ++
Subjt:  EFGGHGALLQEGLFASITLFLASF

AT5G59410.1 Rab5-interacting family protein

2.7e-49

74.38

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Query:  MKDAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG
        MK++K  K N L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FG
Subjt:  MKDAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLASF
        GH ALLQEGLFAS+TLFL ++
Subjt:  GHGALLQEGLFASITLFLASF

Sequences

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CDS sequence

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ATGAAAGACGCAAAACCGGTTAAGTTCAATCTGCATCAGCATCAAGATCACCAAAATGGTCACTTGGCCCCATTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTG
GGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAA
TTTTCTTGGCAATATCAACCAGCGTTGTATATGGATATTATGCAATGATATTAAAAGTCGATGAAGAAGAATTTGGAGGTCATGGGGCTCTCCTCCAAGAGGGCCTTTTT
GCTTCTATAACGCTCTTTCTGGCCTCGTTTTGCTATGAAGTTCAATTCATTCAAGATTGGTCTACTGGTTCAGACAGCTGA

mRNA sequence

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Protein sequence

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MKDAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLASFCYEVQFIQDWSTGSDS

CcUC02G037590 (gene) of Watermelon (PI 537277) v1 genome