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CcUC02G037660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G037660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein At1g07590
Genome locationCicolChr02:33230638..33232750
RNA-Seq ExpressionCcUC02G037660
SyntenyCcUC02G037660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RXI04379.1 hypothetical protein DVH24_038653 [Malus domestica]7.3e-1664.71Show/hide
Query:  STSPLSAKISIIESVVSSHGVDFLTLLLLLVVFDPRSSVFMASSTKPAFKQPKARFRKVMAFGLHPFASISLKISVAFLINPCLQ
        STSP SAK  IIE VVS+HGV+FLT LL++ +  P S V MASST PAFKQPKAR RKVMAFG HP   IS K   A  I PCL+
Subjt:  STSPLSAKISIIESVVSSHGVDFLTLLLLLVVFDPRSSVFMASSTKPAFKQPKARFRKVMAFGLHPFASISLKISVAFLINPCLQ
TrEMBL top hitse value%identityAlignment
A0A2P2Q7J3 Pentatricopeptide repeat-containing protein At1g075901.2e-1166.67Show/hide
Query:  MAFGLHPFASISLKISVAFLINPCLQYTDKIELNWSVALIPLLVFISNQSSSARLSKPILPNASIA
        MAFGLHP  SISL I VA L  PCLQYT+ +EL  SV   P + FIS QSSSAR + PILPNASIA
Subjt:  MAFGLHPFASISLKISVAFLINPCLQYTDKIELNWSVALIPLLVFISNQSSSARLSKPILPNASIA
A0A498K7X5 Uncharacterized protein3.5e-1664.71Show/hide
Query:  STSPLSAKISIIESVVSSHGVDFLTLLLLLVVFDPRSSVFMASSTKPAFKQPKARFRKVMAFGLHPFASISLKISVAFLINPCLQ
        STSP SAK  IIE VVS+HGV+FLT LL++ +  P S V MASST PAFKQPKAR RKVMAFG HP   IS K   A  I PCL+
Subjt:  STSPLSAKISIIESVVSSHGVDFLTLLLLLVVFDPRSSVFMASSTKPAFKQPKARFRKVMAFGLHPFASISLKISVAFLINPCLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTATTTTCAACGTCTCCTCTCTCTGCCAAAATCTCAATCATCGAAAGCGTGGTTTCCAGCCATGGAGTGGACTTTCTAACTCTCTTGCTGCTGCTTGTTGTATT
TGATCCTAGATCTAGTGTTTTCATGGCTTCCTCCACCAAACCAGCTTTCAAGCAACCAAAAGCGAGATTTCGAAAGGTTATGGCGTTTGGTTTGCACCCATTTGCTTCAA
TTTCCCTAAAGATTTCTGTAGCCTTTTTAATCAACCCATGTCTGCAATATACGGATAAAATAGAATTGAATTGGTCCGTGGCTTTAATTCCTCTTTTGGTTTTCATCTCT
AACCAGAGCTCTTCTGCACGGCTTAGTAAACCAATTCTGCCAAATGCTTCAATTGCTAAAAACGAGAATCGAAAAGGAAGCTACAAAGAGGGACACAGAGATAGAAACCT
CGAGTGCGCGCTTGTTCCTTTCGAGCTTCCTGAGGCGATTAATGGTGTGAAAAATGTCGCCTCGATGAATAGGAAAACCATCGCCCATCCAACTCCTGAAGGCATACCCA
ACCGATTCACCCTTTGGTATCCTCTCAATTCTCAAAGACAAGCATTTGGGTCCCTCCAATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTATTTTCAACGTCTCCTCTCTCTGCCAAAATCTCAATCATCGAAAGCGTGGTTTCCAGCCATGGAGTGGACTTTCTAACTCTCTTGCTGCTGCTTGTTGTATT
TGATCCTAGATCTAGTGTTTTCATGGCTTCCTCCACCAAACCAGCTTTCAAGCAACCAAAAGCGAGATTTCGAAAGGTTATGGCGTTTGGTTTGCACCCATTTGCTTCAA
TTTCCCTAAAGATTTCTGTAGCCTTTTTAATCAACCCATGTCTGCAATATACGGATAAAATAGAATTGAATTGGTCCGTGGCTTTAATTCCTCTTTTGGTTTTCATCTCT
AACCAGAGCTCTTCTGCACGGCTTAGTAAACCAATTCTGCCAAATGCTTCAATTGCTAAAAACGAGAATCGAAAAGGAAGCTACAAAGAGGGACACAGAGATAGAAACCT
CGAGTGCGCGCTTGTTCCTTTCGAGCTTCCTGAGGCGATTAATGGTGTGAAAAATGTCGCCTCGATGAATAGGAAAACCATCGCCCATCCAACTCCTGAAGGCATACCCA
ACCGATTCACCCTTTGGTATCCTCTCAATTCTCAAAGACAAGCATTTGGGTCCCTCCAATTCTGA
Protein sequenceShow/hide protein sequence
MAVFSTSPLSAKISIIESVVSSHGVDFLTLLLLLVVFDPRSSVFMASSTKPAFKQPKARFRKVMAFGLHPFASISLKISVAFLINPCLQYTDKIELNWSVALIPLLVFIS
NQSSSARLSKPILPNASIAKNENRKGSYKEGHRDRNLECALVPFELPEAINGVKNVASMNRKTIAHPTPEGIPNRFTLWYPLNSQRQAFGSLQF