; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G038040 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G038040
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCicolChr02:33480094..33480699
RNA-Seq ExpressionCcUC02G038040
SyntenyCcUC02G038040
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3453818.1 hypothetical protein FNV43_RR04259 [Rhamnella rubrinervis]2.3e-3846.7Show/hide
Query:  SPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRPRV-------ENPTDPSPQIHGHGLEASTIHLLPISQFK-KNEKFESTASFNTECA
        SP+P  S W+PW+I+++A V I  LLLS +RIL+  F    S R +         N  DPS Q H HGLE S IH LPI+QFK +N   +     +T+CA
Subjt:  SPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRPRV-------ENPTDPSPQIHGHGLEASTIHLLPISQFK-KNEKFESTASFNTECA

Query:  VCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSL-DFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASV
        VCLGEF+EGE ++ LPNC H+FH SCID WF  HS+CPLCR +++ F+  D   P S   +LETL RE+  +ER  HYQ +++  L +S  R ++S+
Subjt:  VCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSL-DFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASV

KAG6570731.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]8.4e-8177.83Show/hide
Query:  PPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTE
        PPPPSPVPDYSSWSPWSIS IAIVCI  LLLSNYRILK   R+ H +  GR  V   ENP DPSP++H HGLEASTI LLPISQFKKNE+ ESTAS NTE
Subjt:  PPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTE

Query:  CAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASVQG
        CAVCLGEFEEGELIK LPNCNHSFHSSCIDAW R+HSSCPLCRL +S+ S+D  TPDSS  MLETLGRE+V RERV +YQT+RAQ LQ+ ELRRDASVQG
Subjt:  CAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASVQG

Query:  SDQ
        SDQ
Subjt:  SDQ

XP_008448367.1 PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo]4.7e-8478.26Show/hide
Query:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS
        M SSPPPPSPVPDYSSWSPWSISTI IVC+ FLLLSNYR+LK   R+ H + SGRP V   ENP +PS QIH HGLE S I LLPISQFKK E+ EST S
Subjt:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS

Query:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA
        FNTECAVCLGEFEEGELIK LPNCNHSFHSSCIDAWFRDHSSCPLCRLQ+ S    FSTPDSS  MLETLGREN+LRERV HYQT+RAQ LQH E RRD 
Subjt:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA

Query:  SVQGSDQ
        S+QGSDQ
Subjt:  SVQGSDQ

XP_023512261.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]3.2e-8077.34Show/hide
Query:  PPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTE
        PPPPSPVPDYSSWSPWSIS IAIVCI  LLLSNYRILK   R+FH +  GR  V   ENP DPSPQ+H HGLEASTI LLPISQFKKNE+ ESTAS NTE
Subjt:  PPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTE

Query:  CAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASVQG
        CAVCLGEFEEGELIK LPNCNHSFHSSCIDAW R+HSSCPLCRL +S+ S+D  TPDSS  MLETL RE+V  ERV +YQT+RAQ LQ+ +LRRDASVQG
Subjt:  CAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASVQG

Query:  SDQ
        SDQ
Subjt:  SDQ

XP_031743630.1 RING-H2 finger protein ATL52-like [Cucumis sativus]6.8e-8377.88Show/hide
Query:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS
        M SSPPPPSPVPDYSSWSPWSISTI +VCI FLLLSNYR+LK   R+ H + +GRP V   ENP +PS QIHGHGLE S I LLPISQFKKNE+ EST S
Subjt:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS

Query:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD-SSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRD
        FNTECAVCLGEFEEGELIK LPNCNHSFHS CIDAWFR+HSSCPLCRLQ+    L FSTPD SS  MLETLGRENVLRERV HYQT+RAQ LQH E RRD
Subjt:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD-SSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRD

Query:  ASVQGSDQ
        AS+QG+DQ
Subjt:  ASVQGSDQ

TrEMBL top hitse value%identityAlignment
A0A061GXP2 RING-type E3 ubiquitin transferase2.1e-3748.39Show/hide
Query:  SPWSISTIAIVCIFFLLLSNYRILKRL-------FHRVISGRPRV--ENPTDPSP-QIHGHGLEASTIHLLPISQFKKNEKFESTASFNTECAVCLGEFE
        SPW I++IAI+CI FL+   Y  LKRL        +    G+ R+  +   DP P Q   + +E++ IH LPISQ+KK  K E   S NT+CAVCLGEFE
Subjt:  SPWSISTIAIVCIFFLLLSNYRILKRL-------FHRVISGRPRV--ENPTDPSP-QIHGHGLEASTIHLLPISQFKKNEKFESTASFNTECAVCLGEFE

Query:  EGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSL--DFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELR
        EG+L++ LPNC H+FH SCID WF+ HSSCPLCR  +S   +  + S   S   MLETL RE+  ++R  HYQ +R++ L+HS LR
Subjt:  EGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSL--DFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELR

A0A0A0KCA5 RING-type E3 ubiquitin transferase3.3e-8377.88Show/hide
Query:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS
        M SSPPPPSPVPDYSSWSPWSISTI +VCI FLLLSNYR+LK   R+ H + +GRP V   ENP +PS QIHGHGLE S I LLPISQFKKNE+ EST S
Subjt:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS

Query:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD-SSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRD
        FNTECAVCLGEFEEGELIK LPNCNHSFHS CIDAWFR+HSSCPLCRLQ+    L FSTPD SS  MLETLGRENVLRERV HYQT+RAQ LQH E RRD
Subjt:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD-SSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRD

Query:  ASVQGSDQ
        AS+QG+DQ
Subjt:  ASVQGSDQ

A0A1S3BIX6 RING-type E3 ubiquitin transferase2.3e-8478.26Show/hide
Query:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS
        M SSPPPPSPVPDYSSWSPWSISTI IVC+ FLLLSNYR+LK   R+ H + SGRP V   ENP +PS QIH HGLE S I LLPISQFKK E+ EST S
Subjt:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS

Query:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA
        FNTECAVCLGEFEEGELIK LPNCNHSFHSSCIDAWFRDHSSCPLCRLQ+ S    FSTPDSS  MLETLGREN+LRERV HYQT+RAQ LQH E RRD 
Subjt:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA

Query:  SVQGSDQ
        S+QGSDQ
Subjt:  SVQGSDQ

A0A5A7V3S2 RING-type E3 ubiquitin transferase2.3e-8478.26Show/hide
Query:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS
        M SSPPPPSPVPDYSSWSPWSISTI IVC+ FLLLSNYR+LK   R+ H + SGRP V   ENP +PS QIH HGLE S I LLPISQFKK E+ EST S
Subjt:  MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILK---RLFHRVISGRPRV---ENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTAS

Query:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA
        FNTECAVCLGEFEEGELIK LPNCNHSFHSSCIDAWFRDHSSCPLCRLQ+ S    FSTPDSS  MLETLGREN+LRERV HYQT+RAQ LQH E RRD 
Subjt:  FNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDA

Query:  SVQGSDQ
        S+QGSDQ
Subjt:  SVQGSDQ

A0A6P3Z086 RING-type E3 ubiquitin transferase3.2e-3846.11Show/hide
Query:  SSWSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRP-----RVENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFES-TASFNTECAVCLGEFEE
        S W+PW I+++A +CI  +L S  RI+K   + +   +       V NP DPS Q H HGL+ S +H LPI+QFKK+ + +S  A  N +CAVCLGEFEE
Subjt:  SSWSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRP-----RVENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFES-TASFNTECAVCLGEFEE

Query:  GELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHS
        GE ++ L NC H FH SCID W   +S+CP+CR ++    LD     S   +LETL RE+  RER  HYQ +R+  LQ+S
Subjt:  GELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHS

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL11.6e-1834.44Show/hide
Query:  PPPSPVPDYSSWSP--------------WSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGRPRVENPTDP----SPQIHGHGLEASTIHLLPISQF
        PPP P P  +  SP               +I+ I I+   FLL+S Y  + +    +H++ I  R R  +  +P    SP     GL+ S I  +P+ +F
Subjt:  PPPSPVPDYSSWSP--------------WSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGRPRVENPTDP----SPQIHGHGLEASTIHLLPISQF

Query:  KKNEKF---ESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLDFSTPDSS
        KK +     E  +  + EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  +S   SF+LD  +  SS
Subjt:  KKNEKF---ESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLDFSTPDSS

Q7XLY8 E3 ubiquitin-protein ligase Os04g05909002.5e-1931.87Show/hide
Query:  PPPPSPVPDYSS-------WSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRPRVENPTD---------PSPQIHGH---------------GLEAS
        PPPP  V   S+       +SP  I+ I ++   FLL+S Y  + +    V S R RV   +           S   HGH               GL+ +
Subjt:  PPPPSPVPDYSS-------WSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRPRVENPTD---------PSPQIHGH---------------GLEAS

Query:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD
         I+ + + ++++ + F  T    T+C+VCLGEF +GE ++ LP C+H+FH  CID W + HS+CPLCR  I+  ++  ++P+
Subjt:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPD

Q9LF64 RING-H2 finger protein ATL524.7e-1833.92Show/hide
Query:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------VISGRPRVENPTDPSPQI--HGHGLEASTIHLLPISQFKKNEK
        PPPPS   D       SS+SP  I+ I I+    +L+S Y ++ +  HR         ++     E     + +I  +G GL  S I  + + ++K  + 
Subjt:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------VISGRPRVENPTDPSPQI--HGHGLEASTIHLLPISQFKKNEK

Query:  FESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLG
        F       ++C+VCL EFEE E ++ LP CNH+FH  CID W + HS+CPLCR    +F    + P +S+G
Subjt:  FESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLG

Q9LSW9 RING-H2 finger protein ATL166.5e-2035.18Show/hide
Query:  MSSSPPPPSPV-----PDYSSWSPWSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGR----PRVENPTDP----SPQIHGHGLEASTIHLLPISQF
        +S  PPPP P+        +S+   +++ I I+   FLL+S Y  + +    +HR+ I GR     R  N  DP    SP++   GL+ S I  +PI +F
Subjt:  MSSSPPPPSPV-----PDYSSWSPWSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGR----PRVENPTDP----SPQIHGHGLEASTIHLLPISQF

Query:  KK----------NEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLD-FSTPDSSLGMLETLGREN
        KK           E  E     + EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR ++S   SF  D  S P +S   L  L  EN
Subjt:  KK----------NEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLD-FSTPDSSLGMLETLGREN

Q9SRQ8 RING-H2 finger protein ATL518.8e-1733.14Show/hide
Query:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------------------VISGRPRVEN--PTDPSPQI---HGHGLEAS
        PPPPS   D       S +SP  I+ I I+   F+L+S Y ++ +  HR                       G     N   T+P+  I    G GL+ S
Subjt:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------------------VISGRPRVEN--PTDPSPQI---HGHGLEAS

Query:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS
         I  + + +++K + F      +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS+CPLCR  I + S
Subjt:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein1.1e-1934.44Show/hide
Query:  PPPSPVPDYSSWSP--------------WSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGRPRVENPTDP----SPQIHGHGLEASTIHLLPISQF
        PPP P P  +  SP               +I+ I I+   FLL+S Y  + +    +H++ I  R R  +  +P    SP     GL+ S I  +P+ +F
Subjt:  PPPSPVPDYSSWSP--------------WSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGRPRVENPTDP----SPQIHGHGLEASTIHLLPISQF

Query:  KKNEKF---ESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLDFSTPDSS
        KK +     E  +  + EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  +S   SF+LD  +  SS
Subjt:  KKNEKF---ESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLDFSTPDSS

AT3G03550.1 RING/U-box superfamily protein6.3e-1833.14Show/hide
Query:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------------------VISGRPRVEN--PTDPSPQI---HGHGLEAS
        PPPPS   D       S +SP  I+ I I+   F+L+S Y ++ +  HR                       G     N   T+P+  I    G GL+ S
Subjt:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------------------VISGRPRVEN--PTDPSPQI---HGHGLEAS

Query:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS
         I  + + +++K + F      +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS+CPLCR  I + S
Subjt:  TIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS

AT4G15975.1 RING/U-box superfamily protein5.3e-1748.89Show/hide
Query:  TDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS
        TDPS      GL  S I  LPI  F        TA F  EC+VCL EF++ E  + +PNC H+FH  CID WF  HSSCPLCR  I  F+
Subjt:  TDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFS

AT5G17600.1 RING/U-box superfamily protein3.3e-1933.92Show/hide
Query:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------VISGRPRVENPTDPSPQI--HGHGLEASTIHLLPISQFKKNEK
        PPPPS   D       SS+SP  I+ I I+    +L+S Y ++ +  HR         ++     E     + +I  +G GL  S I  + + ++K  + 
Subjt:  PPPPSPVPD------YSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHR--------VISGRPRVENPTDPSPQI--HGHGLEASTIHLLPISQFKKNEK

Query:  FESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLG
        F       ++C+VCL EFEE E ++ LP CNH+FH  CID W + HS+CPLCR    +F    + P +S+G
Subjt:  FESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLG

AT5G43420.1 RING/U-box superfamily protein4.7e-2135.18Show/hide
Query:  MSSSPPPPSPV-----PDYSSWSPWSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGR----PRVENPTDP----SPQIHGHGLEASTIHLLPISQF
        +S  PPPP P+        +S+   +++ I I+   FLL+S Y  + +    +HR+ I GR     R  N  DP    SP++   GL+ S I  +PI +F
Subjt:  MSSSPPPPSPV-----PDYSSWSPWSISTIAIVCIFFLLLSNYRILKRL---FHRV-ISGR----PRVENPTDP----SPQIHGHGLEASTIHLLPISQF

Query:  KK----------NEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLD-FSTPDSSLGMLETLGREN
        KK           E  E     + EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR ++S   SF  D  S P +S   L  L  EN
Subjt:  KK----------NEKFESTASFNTECAVCLGEFEEGELIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQIS---SFSLD-FSTPDSSLGMLETLGREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCGTGGTCAATCTCGACCATCGCAATCGTATGCATCTTCTTCCTACTGTTGAGCAA
CTACAGGATATTGAAACGACTGTTCCATAGAGTGATCTCCGGTCGACCTAGGGTCGAAAACCCTACTGATCCTTCCCCGCAAATCCATGGCCATGGATTGGAGGCCTCAA
CGATTCATTTGCTACCTATATCACAGTTCAAAAAGAATGAAAAATTCGAATCAACGGCAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAA
TTGATTAAACAATTACCGAATTGCAATCATTCGTTTCATAGTTCTTGCATCGACGCCTGGTTCCGTGATCATTCGAGTTGTCCACTCTGCAGATTGCAAATCTCGAGTTT
CTCTCTCGATTTCTCTACTCCTGATTCTTCTTTGGGAATGCTGGAGACGCTTGGAAGAGAAAACGTTCTACGAGAAAGAGTACCGCATTATCAAACAGTTCGTGCTCAAA
ATCTGCAGCACTCGGAATTGAGAAGAGATGCATCGGTTCAAGGATCAGATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCGTGGTCAATCTCGACCATCGCAATCGTATGCATCTTCTTCCTACTGTTGAGCAA
CTACAGGATATTGAAACGACTGTTCCATAGAGTGATCTCCGGTCGACCTAGGGTCGAAAACCCTACTGATCCTTCCCCGCAAATCCATGGCCATGGATTGGAGGCCTCAA
CGATTCATTTGCTACCTATATCACAGTTCAAAAAGAATGAAAAATTCGAATCAACGGCAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAA
TTGATTAAACAATTACCGAATTGCAATCATTCGTTTCATAGTTCTTGCATCGACGCCTGGTTCCGTGATCATTCGAGTTGTCCACTCTGCAGATTGCAAATCTCGAGTTT
CTCTCTCGATTTCTCTACTCCTGATTCTTCTTTGGGAATGCTGGAGACGCTTGGAAGAGAAAACGTTCTACGAGAAAGAGTACCGCATTATCAAACAGTTCGTGCTCAAA
ATCTGCAGCACTCGGAATTGAGAAGAGATGCATCGGTTCAAGGATCAGATCAATGA
Protein sequenceShow/hide protein sequence
MSSSPPPPSPVPDYSSWSPWSISTIAIVCIFFLLLSNYRILKRLFHRVISGRPRVENPTDPSPQIHGHGLEASTIHLLPISQFKKNEKFESTASFNTECAVCLGEFEEGE
LIKQLPNCNHSFHSSCIDAWFRDHSSCPLCRLQISSFSLDFSTPDSSLGMLETLGRENVLRERVPHYQTVRAQNLQHSELRRDASVQGSDQ