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CcUC02G040000 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G040000
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionV-type H+-transporting ATPase subunit E
Genome locationCicolChr02:35299161..35302570
RNA-Seq ExpressionCcUC02G040000
SyntenyCcUC02G040000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7823204.1 5'-3' exoribonuclease 3-like [Senna tora]2.7e-0745Show/hide
Query:  DGIGSVKVRSDVEIPKIELPNEGLVGGKCGEVDV-------------GVDVGLEEKVVIGEAD-------------EDAGEFSVHGNEREWMEEAIDEVE
        DG+G V V   VEIP+IELP+E +   + GEV V             GVDVGLEE VVIG AD             +DAG+F VHG+ER  + +  DEVE
Subjt:  DGIGSVKVRSDVEIPKIELPNEGLVGGKCGEVDV-------------GVDVGLEEKVVIGEAD-------------EDAGEFSVHGNEREWMEEAIDEVE
TrEMBL top hitse value%identityAlignment
A0A4D9C039 V-type H+-transporting ATPase subunit E2.3e-0437.76Show/hide
Query:  IDGIGSVKVRSDVEIPKIELPNEGLVGGKCGEVDVG-------------VDVGLEEKVVIGEA----------DEDAGEFSVHGNEREWMEEAIDEVE
        +D + SV V   VE+ ++ELP+E L   + GE+  G             VDVGL++ VV+G            ++DAGE  VHGNE E ++E  DEVE
Subjt:  IDGIGSVKVRSDVEIPKIELPNEGLVGGKCGEVDVG-------------VDVGLEEKVVIGEA----------DEDAGEFSVHGNEREWMEEAIDEVE
A0A4S8K9I2 Uncharacterized protein5.1e-0443.18Show/hide
Query:  IDGIGSVKVRSDVEIPKIELPNEG--LVGG--KCGEVDVGVDVGLEEKVV-IGE-------ADEDAGEFSVHGNEREWMEEAIDEVEI
        +DG+G   V  +VE+PK+ELP++G   VGG  +  EV+  VDVG E+ VV +G+       AD DA +  VHGNERE +++  D  E+
Subjt:  IDGIGSVKVRSDVEIPKIELPNEG--LVGG--KCGEVDVGVDVGLEEKVV-IGE-------ADEDAGEFSVHGNEREWMEEAIDEVEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATATGGATAAAGAAGAAAGGGAGGAGAAGGGTACCTTCCAGAGACCAGCTTCAAGTCCGTACTTCTTGGTAACTTCATCTGCAGAAGAAGGAGAAGAT
GGGCGTTCGATTTCGCCGATCGATGGAATCGGGAGCGTGAAGGTCAGGAGCGACGTCGAAATCCCTAAAATTGAACTCCCAAATGAAGGTCTGGTGGGTGGCAAG
TGTGGGGAGGTCGACGTCGGCGTCGACGTTGGACTTGAGGAGAAGGTAGTGATCGGAGAGGCGGATGAGGACGCCGGGGAATTCAGTGTCCATGGAAATGAAAGG
GAATGGATGGAGGAGGCGATTGATGAGGTTGAAATCCCAGACCTGACGGAAGTGAAAGTGTGGGATGAGAATGAAGGTGTTGGTTCAGATGCTTCCCATTTGCAA
CGCAAAAGCACATTTACATGGTTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATATGGATAAAGAAGAAAGGGAGGAGAAGGGTACCTTCCAGAGACCAGCTTCAAGTCCGTACTTCTTGGTAACTTCATCTGCAGAAGAAGGAGAAGAT
GGGCGTTCGATTTCGCCGATCGATGGAATCGGGAGCGTGAAGGTCAGGAGCGACGTCGAAATCCCTAAAATTGAACTCCCAAATGAAGGTCTGGTGGGTGGCAAG
TGTGGGGAGGTCGACGTCGGCGTCGACGTTGGACTTGAGGAGAAGGTAGTGATCGGAGAGGCGGATGAGGACGCCGGGGAATTCAGTGTCCATGGAAATGAAAGG
GAATGGATGGAGGAGGCGATTGATGAGGTTGAAATCCCAGACCTGACGGAAGTGAAAGTGTGGGATGAGAATGAAGGTGTTGGTTCAGATGCTTCCCATTTGCAA
CGCAAAAGCACATTTACATGGTTTAATTAA
Protein sequenceShow/hide protein sequence
MEHMDKEEREEKGTFQRPASSPYFLVTSSAEEGEDGRSISPIDGIGSVKVRSDVEIPKIELPNEGLVGGKCGEVDVGVDVGLEEKVVIGEADEDAGEFSVHGNER
EWMEEAIDEVEIPDLTEVKVWDENEGVGSDASHLQRKSTFTWFN