; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G041440 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G041440
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDelta-12 fatty acid desaturase
Genome locationCicolChr02:36548970..36549746
RNA-Seq ExpressionCcUC02G041440
SyntenyCcUC02G041440
Gene Ontology termsGO:0006636 - unsaturated fatty acid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570369.1 Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4384.69Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GPIFTKRE +Q+YISD GILGM FV+YRIG AKGALWV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

Q84UB9.1 RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii]8.9e-4384.69Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPWYL YFNNPPG LISL+GTLTLGWPLYLAFN SGR Y+RFACHYDPY PIFTKRE IQ+YISDAGILGMAF+LYRIG  KG+ WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

XP_022943671.1 delta(12)-oleate desaturase [Cucurbita moschata]1.4e-4386.73Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GPIFTKRE +QIYISD GILGM FVLYRIG AKGALWV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

XP_022957911.1 delta(12)-oleate desaturase-like [Cucurbita moschata]2.2e-4183.67Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R+ACHYDPY PIFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

XP_023512996.1 delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo]3.4e-4284.69Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GPIFTKRE +QIYISD GILGM  VLYRI  AKGALWV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

TrEMBL top hitse value%identityAlignment
A0A2P5EEE4 Fatty acid desaturase6.6e-3673.2Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI
        VFVPKPKSQ+ WY  Y NNPPG ++SLL TLTLGWPLYLAFN SGR Y+RFACHYDPYGPI++ RER+QI+ISDAGI  M FVLY++ AAKG  WV+
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI

A0A2P6QMU7 Putative oxidoreductase3.9e-3675.26Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI
        VFVPKPKS+IPWY  YFNNPPG LIS++ TLTLGWPLYLAFN SGR Y+RFACHYDPYGPIF+ RE +QIYISD GIL  A VLYRI  AKG  W++
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI

A0A6J1FSC4 delta(12)-oleate desaturase6.6e-4486.73Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPW+L YFNNPPG LISLLGTLTLGWPLYLAFN SGR Y+RFACHYDP+GPIFTKRE +QIYISD GILGM FVLYRIG AKGALWV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

A0A6J1H0J3 delta(12)-oleate desaturase-like1.1e-4183.67Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R+ACHYDPY PIFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

A0A6J1K4R6 delta(12)-oleate desaturase1.8e-4182.65Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQ+PWY  YFNNPPG LISL+ TLTLGWPLYLAFN SGR Y+R ACHYDPY PIFTKRE IQ+YISDAGILGMAFVLYRI  AKGA WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

SwissProt top hitse value%identityAlignment
P48631 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 22.1e-3465.98Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI
        VFVPK KS I WY  Y NNPPG +++L  TLTLGWPLYLA N SGR Y+RFACHYDPYGPI++ RER+QIYISDAG+L + + L+R+  AKG  WV+
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI

Q41131 Oleate hydroxylase FAH123.2e-3567.35Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPK KS+I WY  Y NNPPG +++L  TL LGWPLYLAFN SGR Y+RFACHYDPYGPIF++RER+QIYI+D GI    FVLY+   AKG  WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

Q84UB9 Delta(12)-oleate desaturase1.2e-4584.69Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR
        VFVPKPKSQIPWYL YFNNPPG LISL+GTLTLGWPLYLAFN SGR Y+RFACHYDPY PIFTKRE IQ+YISDAGILGMAF+LYRIG  KG+ WV+R
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVIR

Q84VT2 Delta(12)-acyl-lipid-desaturase5.4e-3563.92Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI
        VFVPKPKS++PW+  Y NNPPG +++L+ TLTLGWPLYLA N SG  Y+RFACH+DPYGPI+T RER+QIYISD GI+   + LY+I AA+G  W++
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI

Q8GZC3 Delta(12)-fatty-acid desaturase FAD23.8e-3671.13Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI
        VFVPK KS I W+  Y NNPPG L +L  TLTLGWPLYLAFN SGR Y+RFACHYDPYGPI+T RER +IYISDAG+L + F LYR+ AAKG  WVI
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKGALWVI

Arabidopsis top hitse value%identityAlignment
AT3G12120.1 fatty acid desaturase 21.1e-2760.87Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKG
        VFVPK KS I WY  Y NNP G ++ L     LGWPLYLAFN SGR Y+ FACH+ P  PI+  RER+QIY+SDAGIL + F LYR  AA+G
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKG

AT3G12120.2 fatty acid desaturase 21.1e-2760.87Show/hide
Query:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKG
        VFVPK KS I WY  Y NNP G ++ L     LGWPLYLAFN SGR Y+ FACH+ P  PI+  RER+QIY+SDAGIL + F LYR  AA+G
Subjt:  VFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYRIGAAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGAGTTCCCCACGCAAAGCCTCCTTTCACTCTCAGCCAAATCGAGAAAGCCATTCCTCCCCACTGCTTCCACCGCTCTCTTCTCCGTTCCTTCTCCTACTTACTT
TCCGACCTCACCATTATCTCTCTCTTCTTCTACCTCGCCATTACCTATTTCCCTCTTCTCCCCAAACCGCTCCCTTACATTGCATGGCCCTTTTACTGGCTCTTCCAAGG
CTGCTTCCTCACCGGCGTCTGGGTCATCGCTCACGAGTGCAGCCACCATGCTTTCTCCGACTACCAATTACTCGACGACATCTTCGGCCTCTTCTTCCACTCTGCTCTCC
TCGTCCCCTACTTCTCCTGGAAGTACAGTCACCGGCGCCACCACTCCAACACCGCCTCCCTCGAACGGGATGGTCTTCGTCCCCAAGCCAAAATCCCAAATCCCTTGGTA
TCTAAACTACTTCAATAACCCACCAGGGACGCTCATTTCTCTCCTAGGAACACTCACTCTGGGCTGGCCTTTGTACTTAGCCTTCAACGCCTCAGGCCGTTCCTACAACC
GATTCGCCTGCCACTACGATCCCTACGGCCCAATATTCACCAAACGTGAACGGATTCAAATTTACATCTCGGATGCAGGGATTTTAGGGATGGCGTTCGTGCTCTACCGA
ATTGGTGCTGCGAAAGGGGCGTTATGGGTAATTCGTAATGCCGTTGGTGATTGTGAATGGGTTTTTGGTTTTGATTACTTATTTGCAGCATACTCATCCGTCCTTGCCGC
ACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGAGTTCCCCACGCAAAGCCTCCTTTCACTCTCAGCCAAATCGAGAAAGCCATTCCTCCCCACTGCTTCCACCGCTCTCTTCTCCGTTCCTTCTCCTACTTACTT
TCCGACCTCACCATTATCTCTCTCTTCTTCTACCTCGCCATTACCTATTTCCCTCTTCTCCCCAAACCGCTCCCTTACATTGCATGGCCCTTTTACTGGCTCTTCCAAGG
CTGCTTCCTCACCGGCGTCTGGGTCATCGCTCACGAGTGCAGCCACCATGCTTTCTCCGACTACCAATTACTCGACGACATCTTCGGCCTCTTCTTCCACTCTGCTCTCC
TCGTCCCCTACTTCTCCTGGAAGTACAGTCACCGGCGCCACCACTCCAACACCGCCTCCCTCGAACGGGATGGTCTTCGTCCCCAAGCCAAAATCCCAAATCCCTTGGTA
TCTAAACTACTTCAATAACCCACCAGGGACGCTCATTTCTCTCCTAGGAACACTCACTCTGGGCTGGCCTTTGTACTTAGCCTTCAACGCCTCAGGCCGTTCCTACAACC
GATTCGCCTGCCACTACGATCCCTACGGCCCAATATTCACCAAACGTGAACGGATTCAAATTTACATCTCGGATGCAGGGATTTTAGGGATGGCGTTCGTGCTCTACCGA
ATTGGTGCTGCGAAAGGGGCGTTATGGGTAATTCGTAATGCCGTTGGTGATTGTGAATGGGTTTTTGGTTTTGATTACTTATTTGCAGCATACTCATCCGTCCTTGCCGC
ACTATGA
Protein sequenceShow/hide protein sequence
MSEFPTQSLLSLSAKSRKPFLPTASTALFSVPSPTYFPTSPLSLSSSTSPLPISLFSPNRSLTLHGPFTGSSKAASSPASGSSLTSAATMLSPTTNYSTTSSASSSTLLS
SSPTSPGSTVTGATTPTPPPSNGMVFVPKPKSQIPWYLNYFNNPPGTLISLLGTLTLGWPLYLAFNASGRSYNRFACHYDPYGPIFTKRERIQIYISDAGILGMAFVLYR
IGAAKGALWVIRNAVGDCEWVFGFDYLFAAYSSVLAAL