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CcUC02G041870 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G041870
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionHomeobox protein cut-like 1
Genome locationCicolChr02:36935108..36936325
RNA-Seq ExpressionCcUC02G041870
SyntenyCcUC02G041870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN35832.1 unknown [Zea mays]1.7e-0930.36Show/hide
Query:  VLHRSIFQQISAAHHHHYRIHLQRLQVPASRSEHIQEGFLGAFCLG------PSPHRSAEE------------------WRQENSR--------------
        VL   + Q ++ A HH +  HL  LQ    R    +   + A  LG      P  H   EE                   R++  R              
Subjt:  VLHRSIFQQISAAHHHHYRIHLQRLQVPASRSEHIQEGFLGAFCLG------PSPHRSAEE------------------WRQENSR--------------

Query:  --RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVE
          R VV DV   RV   E++ E+G VG+PG+       G++P     AV+ GGR+ +LG + VV G+    +LG +AEA  + +GP  G DAEAAAV V 
Subjt:  --RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVE

Query:  KDGK---LGRRNGSGLVETEVEMV
          G    +GR      V+  V+ V
Subjt:  KDGK---LGRRNGSGLVETEVEMV

KAG2640080.1 hypothetical protein PVAP13_2KG067848 [Panicum virgatum]7.9e-1033.16Show/hide
Query:  RLQVPASRSEHIQEGFLGAFCLGPSPHRSAEEWRQENSRRKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETV
        R + P +    +++G  G         R+  E  + ++   VV DV  GRV   E++AE+  +G+P +G  R  LG++P E    V+    +A+L  E V
Subjt:  RLQVPASRSEHIQEGFLGAFCLGPSPHRSAEEWRQENSRRKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETV

Query:  VRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL----GRRNGSGLVETEVEMVDGVKEKNGSVVED--RDVEAWIGGADYGAIA
        V G+    +LGGEAEA  + +G G  ADAEAAAV V++ G+L    GR         E E+V       G VV+D       W  G  +G +A
Subjt:  VRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL----GRRNGSGLVETEVEMVDGVKEKNGSVVED--RDVEAWIGGADYGAIA

OAY73279.1 hypothetical protein ACMD2_02830 [Ananas comosus]1.1e-1652.94Show/hide
Query:  VVSDVPTGRVTADENSAEIGHVGKPGIGV-VRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDG
        VV DV  GRV  DE+ AE+G   +PG+G    + LG EP E   AV+DGG +A+LG E VV GDD+  +LGGEAEA  + +GP   ADAEAAAV V++ G
Subjt:  VVSDVPTGRVTADENSAEIGHVGKPGIGV-VRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDG

Query:  KL
        +L
Subjt:  KL

RXH83291.1 hypothetical protein DVH24_005544 [Malus domestica]8.3e-2846.03Show/hide
Query:  RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKD
        R+V++++PT RVT +++   + ++  P + +V   LG +P  SREA++DG R+A+   E +VR +D + +LGGE +AVVLA+ P A ADAEA AV+VE+D
Subjt:  RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKD

Query:  GKL-GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNGGHGFKSTQKRREETR
         +L G+R G     SGLVE E+E++  V+      NG+VV D DVEAW G AD GA+AV+AE+  A   F G G +G KS +KR +E R
Subjt:  GKL-GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNGGHGFKSTQKRREETR

TQE05635.1 hypothetical protein C1H46_008768 [Malus baccata]4.3e-2445.03Show/hide
Query:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL
        +S++PT RVT +++   + H+  P + +V   LG +P  SREA++DG  +A+   E +VR +D + + GGE +AVVLA+ P   ADAEA  V VE+DG+L
Subjt:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL

Query:  -GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNG
         G+R G     SGLVE E+E++  V+      NG+VV DRDVEAW G A+ GA AV+AE+  A   F G G
Subjt:  -GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNG

TrEMBL top hitse value%identityAlignment
A0A199V875 Uncharacterized protein5.5e-1752.94Show/hide
Query:  VVSDVPTGRVTADENSAEIGHVGKPGIGV-VRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDG
        VV DV  GRV  DE+ AE+G   +PG+G    + LG EP E   AV+DGG +A+LG E VV GDD+  +LGGEAEA  + +GP   ADAEAAAV V++ G
Subjt:  VVSDVPTGRVTADENSAEIGHVGKPGIGV-VRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDG

Query:  KL
        +L
Subjt:  KL

A0A498IP91 Uncharacterized protein4.0e-2846.03Show/hide
Query:  RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKD
        R+V++++PT RVT +++   + ++  P + +V   LG +P  SREA++DG R+A+   E +VR +D + +LGGE +AVVLA+ P A ADAEA AV+VE+D
Subjt:  RKVVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKD

Query:  GKL-GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNGGHGFKSTQKRREETR
         +L G+R G     SGLVE E+E++  V+      NG+VV D DVEAW G AD GA+AV+AE+  A   F G G +G KS +KR +E R
Subjt:  GKL-GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNGGHGFKSTQKRREETR

A0A540N3L9 Uncharacterized protein2.1e-2445.03Show/hide
Query:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL
        +S++PT RVT +++   + H+  P + +V   LG +P  SREA++DG  +A+   E +VR +D + + GGE +AVVLA+ P   ADAEA  V VE+DG+L
Subjt:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL

Query:  -GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNG
         G+R G     SGLVE E+E++  V+      NG+VV DRDVEAW G A+ GA AV+AE+  A   F G G
Subjt:  -GRRNG-----SGLVETEVEMVDGVKEK----NGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDFKGNG

A0A7N0VG02 Uncharacterized protein1.8e-2345.14Show/hide
Query:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL
        + +VPT  VT DE+ ++I H  +P +  V + L  +P    E ++D   +A+L  + VV  +D   ++  +AEAVVLA+GP  GADAEAAAV+V +DG+ 
Subjt:  VSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKL

Query:  GRRNGSG-LVETEVEMVDGVKE----KNGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDF------KGNGGHG
        GR  G G LVE E+E+V GV++    +NG+V+ DRD EA +GGAD GAIAV++E+  A I F       GNGG G
Subjt:  GRRNGSG-LVETEVEMVDGVKE----KNGSVVEDRDVEAWIGGADYGAIAVNAEDTTALIDF------KGNGGHG

K3ZVA7 Uncharacterized protein1.1e-1243.85Show/hide
Query:  VVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNV--EKD
        VV DV  GRV +DE++ E+G VG+PG+G      G+EP     AV+ GG  A+L  E VV G+    +LGGEAEA  +  GP AGADAEAAAV V   +D
Subjt:  VVSDVPTGRVTADENSAEIGHVGKPGIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNV--EKD

Query:  GKLGRRNGSGLVETEVEMVDGVKEKNGSVV
         ++  R     VE +VE V  +   + +V+
Subjt:  GKLGRRNGSGLVETEVEMVDGVKEKNGSVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGATTGATTGGGGAAACGGACGAAGGAATCAAACTTCTCTTCGTACTCCACCGCTCGATCTTTCAACAGATCAGCGCCGCCCACCACCACCATTATCGG
ATCCATCTCCAGCGCCTCCAAGTTCCGGCTTCTCGGTCCGAACACATTCAGGAAGGCTTCCTTGGAGCCTTCTGCCTCGGACCGAGTCCTCATCGTTCCGCCGAA
GAATGGCGCCAGGAGAACTCCCGCCGCAAGGTGGTGAGCGATGTTCCCACCGGCCGAGTCACCGCTGATGAAAACTCGGCTGAAATCGGCCACGTCGGCAAGCCA
GGGATCGGGGTGGTCCGATACAGCCTGGGCTCGGAGCCACCGGAGAGCCGTGAAGCCGTCATCGATGGCGGCCGGAAGGCGATTCTCGGGAGCGAGACGGTAGTC
CGGGGAGATGACAAGAGCAGGAAGCTCGGCGGCGAGGCGGAAGCAGTAGTTCTGGCAATTGGGCCAGGTGCGGGAGCCGATGCAGAAGCCGCCGCCGTGAATGTA
GAAAAAGACGGGAAGCTTGGAAGAAGAAATGGCAGCGGGCTTGTAGAGACGGAGGTGGAGATGGTGGATGGGGTCAAAGAGAAGAACGGATCCGTCGTCGAGGAC
AGGGACGTTGAAGCTTGGATTGGAGGAGCGGACTATGGAGCCATCGCTGTAAACGCGGAGGACACCACGGCACTCATCGACTTCAAAGGGAATGGTGGCCATGGC
TTCAAGTCAACACAGAAGAGAAGAGAAGAGACGAGACGAGAAGGGAAGGTGGAAGAAGGGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGATTGATTGGGGAAACGGACGAAGGAATCAAACTTCTCTTCGTACTCCACCGCTCGATCTTTCAACAGATCAGCGCCGCCCACCACCACCATTATCGG
ATCCATCTCCAGCGCCTCCAAGTTCCGGCTTCTCGGTCCGAACACATTCAGGAAGGCTTCCTTGGAGCCTTCTGCCTCGGACCGAGTCCTCATCGTTCCGCCGAA
GAATGGCGCCAGGAGAACTCCCGCCGCAAGGTGGTGAGCGATGTTCCCACCGGCCGAGTCACCGCTGATGAAAACTCGGCTGAAATCGGCCACGTCGGCAAGCCA
GGGATCGGGGTGGTCCGATACAGCCTGGGCTCGGAGCCACCGGAGAGCCGTGAAGCCGTCATCGATGGCGGCCGGAAGGCGATTCTCGGGAGCGAGACGGTAGTC
CGGGGAGATGACAAGAGCAGGAAGCTCGGCGGCGAGGCGGAAGCAGTAGTTCTGGCAATTGGGCCAGGTGCGGGAGCCGATGCAGAAGCCGCCGCCGTGAATGTA
GAAAAAGACGGGAAGCTTGGAAGAAGAAATGGCAGCGGGCTTGTAGAGACGGAGGTGGAGATGGTGGATGGGGTCAAAGAGAAGAACGGATCCGTCGTCGAGGAC
AGGGACGTTGAAGCTTGGATTGGAGGAGCGGACTATGGAGCCATCGCTGTAAACGCGGAGGACACCACGGCACTCATCGACTTCAAAGGGAATGGTGGCCATGGC
TTCAAGTCAACACAGAAGAGAAGAGAAGAGACGAGACGAGAAGGGAAGGTGGAAGAAGGGAAGAATTAA
Protein sequenceShow/hide protein sequence
MCRLIGETDEGIKLLFVLHRSIFQQISAAHHHHYRIHLQRLQVPASRSEHIQEGFLGAFCLGPSPHRSAEEWRQENSRRKVVSDVPTGRVTADENSAEIGHVGKP
GIGVVRYSLGSEPPESREAVIDGGRKAILGSETVVRGDDKSRKLGGEAEAVVLAIGPGAGADAEAAAVNVEKDGKLGRRNGSGLVETEVEMVDGVKEKNGSVVED
RDVEAWIGGADYGAIAVNAEDTTALIDFKGNGGHGFKSTQKRREETRREGKVEEGKN