CuGenDBv2

Gene ID	CcUC02G042020
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	CicolChr02:37017848..37021775
RNA-Seq Expression	CcUC02G042020
Synteny	CcUC02G042020
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

6.4e-153

86.86

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Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F RITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +K+IVEAIAQDPSAQGGISNISALNLQLENQLG+ G QSQVIP AFKNFS S KEKTI+EL QDKWL+CTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC SE CTVRVHRYCLKKMLSNKKSKRACPGCG RW+ST SN+ES+EE +EPDTR QDQPSS++RKKS+L++DIDL PNEDSTAEASQPPPD
Subjt:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSARQQ
        +RRATR+S RQ+
Subjt:  SRRATRSSARQQ

XP_022153726.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia]

2.3e-147

85.26

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Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YK+IVEAIAQDPSAQGGISNI+AL+LQLENQLG+ GSQ SQVIPPAFKNFSISLKEKTI+EL QD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC +EGCTVRVH+YCLKKMLSNKKSKRACPGCG +WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSARQ
        ++RR TRSSARQ
Subjt:  DSRRATRSSARQ

XP_022153728.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia]

2.3e-147

84.98

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YK+IVEAIAQDPSAQGGISNI+AL+LQLENQLG+ GSQ SQVIPPAFKNFSISLKEKTI+EL QD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC +EGCTVRVH+YCLKKMLSNKKSKRACPGCG +WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSARQQ
        ++RR TRSSARQ+
Subjt:  DSRRATRSSARQQ

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

8.1e-156

89.46

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Query:  GFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
        GF MPELSWRHHTLIQALLARGPLREDHFH +FTRITG TPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
Subjt:  GFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ

Query:  IAFYKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSC
        IAFYK+IVEAIAQDPSAQGGISNISALNLQLENQ+G+ GSQSQVIP AFKNFSISLKEKTI+EL QDKWL+C+PDGFVNLGVRSFLDLRSWFRSNDVPSC
Subjt:  IAFYKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSC

Query:  EVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQP
        EVCNEAGVKAELC++E CTVRVHRYCLKKMLSNKKSKRACPGCGI+WRST SN+ESREEE+EPDT  QDQPSS++RKKSRL+IDIDL  NED  AEA QP
Subjt:  EVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQP

Query:  PPDSRRATRSSAR
        P  SRRATR SAR
Subjt:  PPDSRRATRSSAR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

1.5e-154

89.68

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Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQALLARGPLREDHFH +FTRITG TPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        YK+IVEAIAQDPSAQGGISNISALNLQLENQ+G+ GSQSQVIP AFKNFSISLKEKTI+EL QDKWL+C+PDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC++E CTVRVHRYCLKKMLSNKKSKRACPGCGI+WRST SN+ESREEE+EPDT  QDQPSS++RKKSRL+IDIDL  NED  AEA QPP  
Subjt:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSAR
        SRRATR SAR
Subjt:  SRRATRSSAR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

1.1e-150

86.22

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Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F +ITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +K+IVEAIAQD SAQGGISNISALNLQLENQLG+ GSQSQVIP AFKNFS S KEKTI+EL QDKWL+CTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC +E CTVRVH+YCLKKMLSNKKSK+ACPGCG RW+STTSN+E +EEE+EPDTR QDQPSS++RKKSRL++DIDL PNEDSTAEASQPPP 
Subjt:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSARQQ
        +RR TRSSARQ+
Subjt:  SRRATRSSARQQ

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

3.1e-153

86.86

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F RITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +K+IVEAIAQDPSAQGGISNISALNLQLENQLG+ G QSQVIP AFKNFS S KEKTI+EL QDKWL+CTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC SE CTVRVHRYCLKKMLSNKKSKRACPGCG RW+ST SN+ES+EE +EPDTR QDQPSS++RKKS+L++DIDL PNEDSTAEASQPPPD
Subjt:  NEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSARQQ
        +RRATR+S RQ+
Subjt:  SRRATRSSARQQ

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

1.1e-147

84.98

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YK+IVEAIAQDPSAQGGISNI+AL+LQLENQLG+ GSQ SQVIPPAFKNFSISLKEKTI+EL QD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC +EGCTVRVH+YCLKKMLSNKKSKRACPGCG +WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSARQQ
        ++RR TRSSARQ+
Subjt:  DSRRATRSSARQQ

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

1.1e-147

84.98

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YK+IVEAIAQDPSAQGGISNI+AL+LQLENQLG+ GSQ SQVIPPAFKNFSISLKEKTI+EL QD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC +EGCTVRVH+YCLKKMLSNKKSKRACPGCG +WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSARQQ
        ++RR TRSSARQ+
Subjt:  DSRRATRSSARQQ

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

1.1e-147

85.26

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YK+IVEAIAQDPSAQGGISNI+AL+LQLENQLG+ GSQ SQVIPPAFKNFSISLKEKTI+EL QD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQ-SQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC +EGCTVRVH+YCLKKMLSNKKSKRACPGCG +WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSARQ
        ++RR TRSSARQ
Subjt:  DSRRATRSSARQ

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

1.5e-08

23.34

Show/hide

Query:  ELSWRHHTLIQALLARGPL-----REDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
        +++  H   +Q L++ G +     R  H H           DN     + ++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  +
Subjt:  ELSWRHHTLIQALLARGPL-----REDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ

Query:  IAFYKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISEL----VQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--
        +  ++  +E I    S  G    IS LNL  E Q                  S  +K+K + +L    VQDKWL    +G   L  R  ++L  +  +  
Subjt:  IAFYKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISEL----VQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--

Query:  NDVPS-CEVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSR
         DV   C VC++  ++ +LC  E C + +H  C   +     +   CP C   W     ++   +  ++  + +Q  P   R ++SR
Subjt:  NDVPS-CEVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

2.1e-10

23.49

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Query:  HHTLIQALLARG-----PLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYK
        H   +QAL++ G      +R  H H           D      + ++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++
Subjt:  HHTLIQALLARG-----PLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYK

Query:  SIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISEL----VQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--NDVPS
          +E I    S  G  ++IS LNL  E Q                  S  +K+K + +L    VQ+KWL    +G   L  R  ++L  + R+   DV  
Subjt:  SIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISEL----VQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--NDVPS

Query:  -CEVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKS
         C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W     ++     +    ++ +     N+R K+
Subjt:  -CEVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

4.2e-94

56.63

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FHS+FT +TG  P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKSIVEAIAQDPSAQGGISNISALNLQLENQL-GEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        +K I+EAIAQD +AQG IS+  ALN++LENQ+  E  S  Q +PPAFKNFS++ KEKT+ ELV+DKWL  T +  + LG+RS LDLRSWFR+NDVPSCEV
Subjt:  YKSIVEAIAQDPSAQGGISNISALNLQLENQL-GEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRW-RSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPP
        CNEAGVKA+LC +EGC VR+H+YCLKK+LS +  KR C GCG  W  S  +  E+ EE    +  ++ Q ++ + K+ R   D   E      + AS   
Subjt:  CNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRW-RSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPP

Query:  PDSRRATRS
         ++RR TRS
Subjt:  PDSRRATRS

Sequences

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CDS sequence

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ATGAAATTTAATCACTGCCACTGGGCGCGAGTTTATAGAGAGGGAGGGGGCGGTATTTCCCGCGTTTTGAACTCGTATTTCCTTCGGGAAACTTCACTCCCGGGGTTCAC
AATGCCAGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTACTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTCGGTGTTTACGCGAATCACTGGAAATA
CTCCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCCTGACCATTAATAAAGCACTCTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGT
GTTTACTATGGCTTGGTCAATAATGTATCTGACGAGCAATCCAAGTTGGGAACAAAGTATTCAGTTCCACAGATTGCATTTTATAAATCCATTGTTGAAGCAATTGCGCA
AGATCCATCTGCTCAAGGTGGAATATCCAACATTTCTGCTCTTAATCTGCAGTTGGAAAATCAGCTGGGGGAACCAGGGTCCCAGTCCCAAGTCATACCACCTGCTTTCA
AGAATTTCTCCATATCTCTCAAGGAAAAAACAATTTCCGAGCTTGTGCAGGATAAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCGTTTCTT
GATTTGCGAAGTTGGTTCCGCAGTAATGATGTACCTTCATGTGAAGTCTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTCATAGTGAAGGTTGCACTGTCCGTGTACA
TCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGCCCAGGTTGTGGCATTCGTTGGCGATCTACAACATCCAATATGGAGTCCAGGGAGGAAG
AGAACGAGCCAGATACACGCAATCAAGATCAACCATCATCAAATAGGAGGAAGAAATCCAGGTTGAGCATAGATATTGATTTAGAACCAAATGAAGACAGTACGGCAGAA
GCTTCCCAACCTCCTCCAGATTCAAGGAGGGCAACACGAAGTTCTGCACGCCAGCAGTAG

mRNA sequence

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Protein sequence

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MKFNHCHWARVYREGGGGISRVLNSYFLRETSLPGFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGR
VYYGLVNNVSDEQSKLGTKYSVPQIAFYKSIVEAIAQDPSAQGGISNISALNLQLENQLGEPGSQSQVIPPAFKNFSISLKEKTISELVQDKWLNCTPDGFVNLGVRSFL
DLRSWFRSNDVPSCEVCNEAGVKAELCHSEGCTVRVHRYCLKKMLSNKKSKRACPGCGIRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAE
ASQPPPDSRRATRSSARQQ

CcUC02G042020 (gene) of Watermelon (PI 537277) v1 genome