; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC02G042260 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC02G042260
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionC2H2 and C2HC zinc fingers superfamily protein
Genome locationCicolChr02:37243749..37248281
RNA-Seq ExpressionCcUC02G042260
SyntenyCcUC02G042260
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER49458.1 C2H2 and C2HC zinc fingers superfamily protein [Striga asiatica]2.4e-3043.25Show/hide
Query:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELARTPHSS
        +V TAS+G+APAAVSPL+ITQSVPSRTAFATSVASA VG G L IDSSICVAVTTGFP +           NIFSIGISIP+SP ATMNASELA     +
Subjt:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELARTPHSS

Query:  ISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANFLVRKRYSRLSGSEEESRYVETKSEKS----R
        ++       V     TP  L   +S    +  + H                                      R   +    +ESR + T ++K      
Subjt:  ISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANFLVRKRYSRLSGSEEESRYVETKSEKS----R

Query:  EERNLGIKHDGAENASILHSGPEIVEGFLVIGVGSVREVETSNIHPSFQELL
         E +LG++HDGA++A   +   EIVE FL+IGV +VREVE+S  H S ++LL
Subjt:  EERNLGIKHDGAENASILHSGPEIVEGFLVIGVGSVREVETSNIHPSFQELL

GEU32160.1 hypothetical protein [Tanacetum cinerariifolium]2.3e-1759.34Show/hide
Query:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTAS
        L D   +TGTKP+KIKLCLAGASSL D S ES+L SGT  DKIG  G YLAT+ +VLPP V T IR A     V T ++A+LS+GL+GT +
Subjt:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTAS

GEW48912.1 hypothetical protein [Tanacetum cinerariifolium]3.7e-1586.44Show/hide
Query:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPW
        +V TA+SGYAPAAVSPL++TQSVPSRTAFATSVASA VGL DLIIDSSICVAVTTGFP+
Subjt:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPW

GEZ71503.1 zinc finger, CCHC-type [Tanacetum cinerariifolium]2.0e-2453.55Show/hide
Query:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTASTHIFAIVLT
        L D   +T TKP KIKLCLAGA  +   S ES+L SGTTTDKIG  G YLAT+ AVLPP V T IR A     VL  ++  + +  +G            
Subjt:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTASTHIFAIVLT

Query:  ASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPW
                     +  QSVPSRTAFATSVASA VGLGDLIIDSSICVAVTTGFP+
Subjt:  ASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPW

KYC62777.1 hypothetical protein B4099_2653 [Weizmannia coagulans]1.3e-1539.49Show/hide
Query:  SVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELAR------TPH-----------------
        SVPS+ A ATS+ASA VG G   I+SSICVAV TG P +LH  II+FC     S+GIS P+SPRAT+  S+ AR      TP                  
Subjt:  SVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELAR------TPH-----------------

Query:  ---------------------------SSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSS
                                   + IS  S SV  GR T TPG LT FL  +T  FS      P FLS   T + I PS   I  P  TSS
Subjt:  ---------------------------SSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSS

TrEMBL top hitse value%identityAlignment
A0A150JZT6 Uncharacterized protein6.2e-1639.49Show/hide
Query:  SVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELAR------TPH-----------------
        SVPS+ A ATS+ASA VG G   I+SSICVAV TG P +LH  II+FC     S+GIS P+SPRAT+  S+ AR      TP                  
Subjt:  SVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELAR------TPH-----------------

Query:  ---------------------------SSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSS
                                   + IS  S SV  GR T TPG LT FL  +T  FS      P FLS   T + I PS   I  P  TSS
Subjt:  ---------------------------SSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSS

A0A5A7NXD0 Aspartate carbamoyltransferase regulatory chain1.5e-1486.44Show/hide
Query:  AIVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFP
        AIV TASSG APAA+SPL++TQSVPSRTA ATSVASA VG GDLIIDSSICVAVTTGFP
Subjt:  AIVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFP

A0A5A7QWV0 C2H2 and C2HC zinc fingers superfamily protein1.2e-3043.25Show/hide
Query:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELARTPHSS
        +V TAS+G+APAAVSPL+ITQSVPSRTAFATSVASA VG G L IDSSICVAVTTGFP +           NIFSIGISIP+SP ATMNASELA     +
Subjt:  IVLTASSGYAPAAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELARTPHSS

Query:  ISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANFLVRKRYSRLSGSEEESRYVETKSEKS----R
        ++       V     TP  L   +S    +  + H                                      R   +    +ESR + T ++K      
Subjt:  ISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANFLVRKRYSRLSGSEEESRYVETKSEKS----R

Query:  EERNLGIKHDGAENASILHSGPEIVEGFLVIGVGSVREVETSNIHPSFQELL
         E +LG++HDGA++A   +   EIVE FL+IGV +VREVE+S  H S ++LL
Subjt:  EERNLGIKHDGAENASILHSGPEIVEGFLVIGVGSVREVETSNIHPSFQELL

A0A6L2J675 Uncharacterized protein1.1e-1759.34Show/hide
Query:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTAS
        L D   +TGTKP+KIKLCLAGASSL D S ES+L SGT  DKIG  G YLAT+ +VLPP V T IR A     V T ++A+LS+GL+GT +
Subjt:  LADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTAS

M0TDC0 Uncharacterized protein3.6e-1668.35Show/hide
Query:  SELARTPHSSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANF
        S L   PH  ISSLS SVRVGRSTITPG+LTFFLSPRTAEFSQR RT P+ LSQ  T + IVPS   + L GF SSA+F
Subjt:  SELARTPHSSISSLSLSVRVGRSTITPGKLTFFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACCTTGCTGATGCTGTGCTAAGAACTGGTACCAAGCCACGAAAGATTAAGCTATGCCTTGCTGGAGCTTCATCACTGCACGACCAATCAAATGAATCTGTCTT
AATCTCGGGGACAACTACGGACAAGATCGGCGTTCCTGGCCTATACTTGGCCACCAATTTTGCTGTGCTTCCTCCTCTAGTTAGGACAAGTATAAGAGCTGCCTTGGCTG
AGTTTGCAGTCCTAACAGCAGAAGAAGCCAGGCTCTCTAATGGGCTCATGGGAACTGCTTCAACACATATTTTTGCCATTGTTCTAACAGCAAGTTCAGGATATGCTCCA
GCAGCCGTTTCACCACTTAACATTACGCAATCTGTCCCATCAAGAACAGCATTTGCAACATCAGTGGCTTCAGCTCTAGTTGGCCTAGGAGATTTAATCATTGATTCCAG
CATCTGTGTCGCTGTGACAACAGGTTTTCCCTGGATGTTGCACTTGTATATCATCACTTTCTGCGCCAAAAATATCTTCTCAATTGGAATTTCCATTCCCAAGTCACCAC
GTGCCACCATGAATGCATCTGAATTGGCTAGAACCCCCCATTCTAGTATATCTTCCTTATCTTTGTCCGTAAGGGTAGGGAGATCCACTATAACTCCAGGTAAGTTAACA
TTTTTCCTTTCACCAAGAACTGCAGAGTTCTCACAGCGGCATCGTACCAAACCCAATTTTTTGTCACAAGATAGAACTGAAAATGAGATTGTACCATCTGAGCAAAGTAT
TACGCTCCCTGGCTTTACATCCTCTGCTAACTTTTTAGTCAGGAAGAGATATTCCAGATTATCTGGATCAGAAGAGGAAAGTAGATATGTAGAAACGAAGAGCGAGAAAT
CGAGGGAAGAGAGAAACCTTGGTATCAAGCATGACGGCGCAGAGAATGCCAGTATTCTCCATTCCGGCCCTGAGATTGTCGAGGGTTTCCTGGTGATAGGCGTGGGATCC
GTGAGAGAAGTTGAAACGAGCAACATTCATCCCAGCTTTCAAGAGCTTCTCGATCATGGGAACGGACCTGGATGCCGGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGACCTTGCTGATGCTGTGCTAAGAACTGGTACCAAGCCACGAAAGATTAAGCTATGCCTTGCTGGAGCTTCATCACTGCACGACCAATCAAATGAATCTGTCTT
AATCTCGGGGACAACTACGGACAAGATCGGCGTTCCTGGCCTATACTTGGCCACCAATTTTGCTGTGCTTCCTCCTCTAGTTAGGACAAGTATAAGAGCTGCCTTGGCTG
AGTTTGCAGTCCTAACAGCAGAAGAAGCCAGGCTCTCTAATGGGCTCATGGGAACTGCTTCAACACATATTTTTGCCATTGTTCTAACAGCAAGTTCAGGATATGCTCCA
GCAGCCGTTTCACCACTTAACATTACGCAATCTGTCCCATCAAGAACAGCATTTGCAACATCAGTGGCTTCAGCTCTAGTTGGCCTAGGAGATTTAATCATTGATTCCAG
CATCTGTGTCGCTGTGACAACAGGTTTTCCCTGGATGTTGCACTTGTATATCATCACTTTCTGCGCCAAAAATATCTTCTCAATTGGAATTTCCATTCCCAAGTCACCAC
GTGCCACCATGAATGCATCTGAATTGGCTAGAACCCCCCATTCTAGTATATCTTCCTTATCTTTGTCCGTAAGGGTAGGGAGATCCACTATAACTCCAGGTAAGTTAACA
TTTTTCCTTTCACCAAGAACTGCAGAGTTCTCACAGCGGCATCGTACCAAACCCAATTTTTTGTCACAAGATAGAACTGAAAATGAGATTGTACCATCTGAGCAAAGTAT
TACGCTCCCTGGCTTTACATCCTCTGCTAACTTTTTAGTCAGGAAGAGATATTCCAGATTATCTGGATCAGAAGAGGAAAGTAGATATGTAGAAACGAAGAGCGAGAAAT
CGAGGGAAGAGAGAAACCTTGGTATCAAGCATGACGGCGCAGAGAATGCCAGTATTCTCCATTCCGGCCCTGAGATTGTCGAGGGTTTCCTGGTGATAGGCGTGGGATCC
GTGAGAGAAGTTGAAACGAGCAACATTCATCCCAGCTTTCAAGAGCTTCTCGATCATGGGAACGGACCTGGATGCCGGCCCTAG
Protein sequenceShow/hide protein sequence
MDDLADAVLRTGTKPRKIKLCLAGASSLHDQSNESVLISGTTTDKIGVPGLYLATNFAVLPPLVRTSIRAALAEFAVLTAEEARLSNGLMGTASTHIFAIVLTASSGYAP
AAVSPLNITQSVPSRTAFATSVASALVGLGDLIIDSSICVAVTTGFPWMLHLYIITFCAKNIFSIGISIPKSPRATMNASELARTPHSSISSLSLSVRVGRSTITPGKLT
FFLSPRTAEFSQRHRTKPNFLSQDRTENEIVPSEQSITLPGFTSSANFLVRKRYSRLSGSEEESRYVETKSEKSREERNLGIKHDGAENASILHSGPEIVEGFLVIGVGS
VREVETSNIHPSFQELLDHGNGPGCRP