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CcUC03G044160 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC03G044160
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
Genome locationCicolChr03:1950537..1953891
RNA-Seq ExpressionCcUC03G044160
SyntenyCcUC03G044160
Gene Ontology termsNA
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66039.2 hypothetical protein Csa_020117 [Cucumis sativus]3.3e-1664.41Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKA
        MD HN N ++ CDVCGD+GYNEVIFTCS C  AR+H YCM  H+   +PE+WVC+SCKA
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKA

XP_008457530.1 PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo]1.8e-1763.24Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES
        MD HN N +++CDVCGD+GYNEVIFTCS C  AR+H YCM  H+    PE+WVC+SCKAN R +V ES
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES

XP_016902110.1 PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo]5.1e-1740.4Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES---------QQPFQLETETLYGIPNVDESEHP
        MD HN N +++CDVCGD+GYNEVIFTCS C  AR+H YCM  H+    PE+WVC+SCKAN R +V ES         QQP            ++ E E  
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES---------QQPFQLETETLYGIPNVDESEHP

Query:  FQSKTETIYETVDADSF--VGQQFHQGSTDSKGDEIGIRTRAFNKDKLMVE
         Q + E       ++    +    +QGS  S+ DEI    R F+  + +VE
Subjt:  FQSKTETIYETVDADSF--VGQQFHQGSTDSKGDEIGIRTRAFNKDKLMVE

XP_031737075.1 uncharacterized protein LOC105435920 isoform X1 [Cucumis sativus]1.6e-1565Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQH-SYCMGDHSVRNIPENWVCESCKA
        MD HN N ++ CDVCGD+GYNEVIFTCS C  AR+H SYCM  H+   +PE+WVC+SCKA
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQH-SYCMGDHSVRNIPENWVCESCKA

XP_031737080.1 uncharacterized protein LOC105435920 isoform X2 [Cucumis sativus]3.3e-1664.41Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKA
        MD HN N ++ CDVCGD+GYNEVIFTCS C  AR+H YCM  H+   +PE+WVC+SCKA
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKA

TrEMBL top hitse value%identityAlignment
A0A1S3C5B2 uncharacterized protein LOC103497199 isoform X18.5e-1863.24Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES
        MD HN N +++CDVCGD+GYNEVIFTCS C  AR+H YCM  H+    PE+WVC+SCKAN R +V ES
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES

A0A1S4E2A9 uncharacterized protein LOC103497199 isoform X32.5e-1740.4Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES---------QQPFQLETETLYGIPNVDESEHP
        MD HN N +++CDVCGD+GYNEVIFTCS C  AR+H YCM  H+    PE+WVC+SCKAN R +V ES         QQP            ++ E E  
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES---------QQPFQLETETLYGIPNVDESEHP

Query:  FQSKTETIYETVDADSF--VGQQFHQGSTDSKGDEIGIRTRAFNKDKLMVE
         Q + E       ++    +    +QGS  S+ DEI    R F+  + +VE
Subjt:  FQSKTETIYETVDADSF--VGQQFHQGSTDSKGDEIGIRTRAFNKDKLMVE

A0A5A7SSF9 Secretion protein HlyD family protein3.3e-1465.52Show/hide
Query:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES
        +CDVCGD+GYNEVIFTCS C  AR+H YCM  H+    PE+WVC+SCKAN R +V ES
Subjt:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR-IVDES

A0A6P5G9G0 uncharacterized protein LOC109721305 isoform X39.4e-0939.74Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVDESQQPFQLETETL
        M+      D ICD+CG++GY E I TC  C KA +H YCM  H +  IP  W CE C+ + + V E++      T+T+
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVDESQQPFQLETETL

A0A6P5GGF7 uncharacterized protein LOC109721305 isoform X19.4e-0939.74Show/hide
Query:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVDESQQPFQLETETL
        M+      D ICD+CG++GY E I TC  C KA +H YCM  H +  IP  W CE C+ + + V E++      T+T+
Subjt:  MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVDESQQPFQLETETL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein3.7e-0534.62Show/hide
Query:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR
        +C +CGDVG+++ +F+C  C    QHSYC   +     P   +C+ C+++ R
Subjt:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPR

AT1G43770.1 RING/FYVE/PHD zinc finger superfamily protein8.2e-0533.93Show/hide
Query:  HNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIP----ENWVCESC
        H    +C  CGD+G+ E +  C  C     H YC+G   +  IP      W+CE C
Subjt:  HNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIP----ENWVCESC

AT3G02890.1 RING/FYVE/PHD zinc finger superfamily protein1.5e-0634.33Show/hide
Query:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPEN-WVCESCKANPRIVDESQQPFQLETE
        +CD CGD G  +++  CS C+   +H+YCM    ++ +P+  W+CE CK       E  +  +LET+
Subjt:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPEN-WVCESCKANPRIVDESQQPFQLETE

AT5G16680.1 RING/FYVE/PHD zinc finger superfamily protein3.9e-0739.58Show/hide
Query:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPE-NWVCESC
        +CD+CGD G  +++  CS C+   +H+YCM +  +  +PE +W+CE C
Subjt:  ICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPE-NWVCESC

AT5G61110.1 zinc ion binding5.5e-0940.74Show/hide
Query:  CDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVD
        C+VCG    +  I TC  C   R+H YC   H +R++P  W+CE C+ NP +V+
Subjt:  CDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCCACAATCACAATACGGATGATATTTGTGACGTTTGTGGTGATGTTGGGTACAATGAAGTCATTTTCACTTGCTCTTTCTGCACAAAAGCCCGTCAG
CATAGTTATTGTATGGGTGATCATAGTGTAAGGAACATCCCAGAAAATTGGGTTTGTGAGTCATGTAAGGCCAATCCCAGAATTGTTGATGAATCACAACAACCA
TTTCAACTTGAAACAGAAACCCTTTATGGAATTCCAAATGTTGATGAATCAGAACATCCATTTCAGTCTAAAACAGAAACCATTTATGAAACTGTTGATGCTGAT
TCTTTTGTTGGACAGCAGTTTCATCAAGGATCCACAGACTCAAAAGGTGATGAGATAGGGATTCGCACAAGAGCTTTCAATAAAGATAAACTTATGGTAGAGAAG
GTTGAGAAGATTGAAAAAGATGTAGCAGAGAAACTTGAGAAAATTGAAAATGGTGTATTAGAGGAGGCTAAGATGAAGAAAAAGGTTCATAAAAAGTGCAAATGC
ATTGAGTTGCAGATCAAAAGTCTTGATAGTCGCATTGAAGGTATTGAAACTGACTTGAAAGCAGTCAGAAAGTACTTGCATCGGCTATCTAAG
mRNA sequenceShow/hide mRNA sequence
CTCCAATTTTCATTTAAACAGAGTATTTCTATTGAAGCTCAAAACGTTCCTCTGTTTCAGCCATGGATACCCACAATCACAATACGGATGATATTTGTGACGTTT
GTGGTGATGTTGGGTACAATGAAGTCATTTTCACTTGCTCTTTCTGCACAAAAGCCCGTCAGCATAGTTATTGTATGGGTGATCATAGTGTAAGGAACATCCCAG
AAAATTGGGTTTGTGAGTCATGTAAGGCCAATCCCAGAATTGTTGATGAATCACAACAACCATTTCAACTTGAAACAGAAACCCTTTATGGAATTCCAAATGTTG
ATGAATCAGAACATCCATTTCAGTCTAAAACAGAAACCATTTATGAAACTGTTGATGCTGATTCTTTTGTTGGACAGCAGTTTCATCAAGGATCCACAGACTCAA
AAGGTGATGAGATAGGGATTCGCACAAGAGCTTTCAATAAAGATAAACTTATGGTAGAGAAGGTTGAGAAGATTGAAAAAGATGTAGCAGAGAAACTTGAGAAAA
TTGAAAATGGTGTATTAGAGGAGGCTAAGATGAAGAAAAAGGTTCATAAAAAGTGCAAATGCATTGAGTTGCAGATCAAAAGTCTTGATAGTCGCATTGAAGGTA
TTGAAACTGACTTGAAAGCAGTCAGAAAGTACTTGCATCGGCTATCTAAG
Protein sequenceShow/hide protein sequence
MDTHNHNTDDICDVCGDVGYNEVIFTCSFCTKARQHSYCMGDHSVRNIPENWVCESCKANPRIVDESQQPFQLETETLYGIPNVDESEHPFQSKTETIYETVDAD
SFVGQQFHQGSTDSKGDEIGIRTRAFNKDKLMVEKVEKIEKDVAEKLEKIENGVLEEAKMKKKVHKKCKCIELQIKSLDSRIEGIETDLKAVRKYLHRLSK