; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC03G044490 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC03G044490
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionhistone H4
Genome locationCicolChr03:2387881..2388849
RNA-Seq ExpressionCcUC03G044490
SyntenyCcUC03G044490
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0048856 - anatomical structure development (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold
IPR019809 - Histone H4, conserved site
IPR035425 - CENP-T/Histone H4, histone fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4099840.1 unnamed protein product [Lactuca saligna]8.7e-5090.52Show/hide
Query:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
        P+++ LL++     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
Subjt:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD

Query:  VVYALKRQGRTLYGFG
        VVYALKRQGRTLYGFG
Subjt:  VVYALKRQGRTLYGFG

KAG6531442.1 hypothetical protein ZIOFF_005249 [Zingiber officinale]1.5e-4993.75Show/hide
Query:  NLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
        N LQ+  ++ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
Subjt:  NLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA

Query:  LKRQGRTLYGFG
        LKRQGRTLYGFG
Subjt:  LKRQGRTLYGFG

KAG6535715.1 hypothetical protein ZIOFF_000738 [Zingiber officinale]1.5e-4993.75Show/hide
Query:  NLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
        N LQ+  ++ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA
Subjt:  NLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYA

Query:  LKRQGRTLYGFG
        LKRQGRTLYGFG
Subjt:  LKRQGRTLYGFG

PLY78886.1 hypothetical protein LSAT_5X167041 [Lactuca sativa]8.7e-5090.52Show/hide
Query:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
        P+++ LL++     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
Subjt:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD

Query:  VVYALKRQGRTLYGFG
        VVYALKRQGRTLYGFG
Subjt:  VVYALKRQGRTLYGFG

XP_007179087.1 uncharacterized protein LOC102998156 [Balaenoptera acutorostrata scammoni]2.5e-4992.92Show/hide
Query:  NLLQIF-FKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY
        NL  +F F +TMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Subjt:  NLLQIF-FKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY

Query:  ALKRQGRTLYGFG
        ALKRQGRTLYGFG
Subjt:  ALKRQGRTLYGFG

TrEMBL top hitse value%identityAlignment
A0A2J6KUW8 Histone H44.2e-5090.52Show/hide
Query:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
        P+++ LL++     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
Subjt:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD

Query:  VVYALKRQGRTLYGFG
        VVYALKRQGRTLYGFG
Subjt:  VVYALKRQGRTLYGFG

A0A383ZVD9 uncharacterized protein LOC1029981561.2e-4992.92Show/hide
Query:  NLLQIF-FKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY
        NL  +F F +TMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Subjt:  NLLQIF-FKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY

Query:  ALKRQGRTLYGFG
        ALKRQGRTLYGFG
Subjt:  ALKRQGRTLYGFG

A0A445HFY4 Histone H41.6e-4996.33Show/hide
Query:  QIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR
        Q+  +ATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR
Subjt:  QIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR

Query:  QGRTLYGFG
        QGRTLYGFG
Subjt:  QGRTLYGFG

A0A6S7NPF6 Histone H44.2e-5090.52Show/hide
Query:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
        P+++ LL++     MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD
Subjt:  PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMD

Query:  VVYALKRQGRTLYGFG
        VVYALKRQGRTLYGFG
Subjt:  VVYALKRQGRTLYGFG

K4AK23 Histone H45.5e-5095.45Show/hide
Query:  LQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK
        LQ+F  + MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK
Subjt:  LQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALK

Query:  RQGRTLYGFG
        RQGRTLYGFG
Subjt:  RQGRTLYGFG

SwissProt top hitse value%identityAlignment
P59259 Histone H42.4e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

P62785 Histone H4 variant TH0112.4e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6LAF3 Histone H42.4e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6PMI5 Histone H42.4e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6WZ83 Histone H42.4e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein1.7e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.1 Histone superfamily protein1.7e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.2 Histone superfamily protein1.7e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT2G28740.1 histone H41.7e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT3G45930.1 Histone superfamily protein1.7e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTATTCGTCGGAATCTCCTCCAAATCTTCTTCAAAGCAACAATGTCAGGCAGGGGCAAAGGAGGAAAAGGCCTCGGAAAGGGAGGAGCCAAGAGGCATCGCAAGGTTCT
AAGAGACAACATCCAAGGAATCACCAAGCCGGCTATCCGCCGTCTTGCCAGGCGTGGTGGCGTAAAGCGTATCAGCGGCCTGATCTACGAGGAGACTCGCGGCGTTCTCA
AGATCTTCCTCGAGAATGTCATTCGCGACGCCGTCACCTACACTGAGCACGCTCGCCGGAAGACCGTCACCGCCATGGACGTCGTGTACGCGCTCAAGAGGCAAGGTCGT
ACTCTGTATGGCTTTGGAGAAGTTTTCGTTCTCCCGCTTTTGCTTTTGAGCGCGAAGGGATTTGAGGACGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
CCTATTCGTCGGAATCTCCTCCAAATCTTCTTCAAAGCAACAATGTCAGGCAGGGGCAAAGGAGGAAAAGGCCTCGGAAAGGGAGGAGCCAAGAGGCATCGCAAGGTTCT
AAGAGACAACATCCAAGGAATCACCAAGCCGGCTATCCGCCGTCTTGCCAGGCGTGGTGGCGTAAAGCGTATCAGCGGCCTGATCTACGAGGAGACTCGCGGCGTTCTCA
AGATCTTCCTCGAGAATGTCATTCGCGACGCCGTCACCTACACTGAGCACGCTCGCCGGAAGACCGTCACCGCCATGGACGTCGTGTACGCGCTCAAGAGGCAAGGTCGT
ACTCTGTATGGCTTTGGAGAAGTTTTCGTTCTCCCGCTTTTGCTTTTGAGCGCGAAGGGATTTGAGGACGGAAATTAA
Protein sequenceShow/hide protein sequence
PIRRNLLQIFFKATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGR
TLYGFGEVFVLPLLLLSAKGFEDGN