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CcUC03G044650 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC03G044650
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionvon Willebrand factor, type A
Genome locationCicolChr03:2599550..2599921
RNA-Seq ExpressionCcUC03G044650
SyntenyCcUC03G044650
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO71229.1 von Willebrand factor, type A [Corchorus capsularis]2.2e-0742Show/hide
Query:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDSESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSREA
        +F+ H I+     ++  K + ++  ++ L S       ++R A  +   K   YS+SESIE++  GLTERF RG +KGLSDLCLL  S L SFIP  REA
Subjt:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDSESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSREA
OMP09731.1 von Willebrand factor, type A [Corchorus olitorius]9.2e-0640.59Show/hide
Query:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDS-ESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSRE
        +F+ H I+     ++  K + ++  ++ L S       ++R A  +   K   YS+S ESIE++  GLTERF RG +KGLSDLCLL  S L SF+P  RE
Subjt:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDS-ESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSRE

Query:  A
        A
Subjt:  A
TrEMBL top hitse value%identityAlignment
A0A1R3HLK1 von Willebrand factor, type A1.1e-0742Show/hide
Query:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDSESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSREA
        +F+ H I+     ++  K + ++  ++ L S       ++R A  +   K   YS+SESIE++  GLTERF RG +KGLSDLCLL  S L SFIP  REA
Subjt:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDSESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSREA
A0A1R3KRM7 von Willebrand factor, type A4.5e-0640.59Show/hide
Query:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDS-ESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSRE
        +F+ H I+     ++  K + ++  ++ L S       ++R A  +   K   YS+S ESIE++  GLTERF RG +KGLSDLCLL  S L SF+P  RE
Subjt:  NFLTHKIL-----NILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDS-ESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLTSFIPRSRE

Query:  A
        A
Subjt:  A
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGCCAGATTCCTTCCACTAGCTTCGTTCCACGACGATGGCTCGCTTATGAGCAAATCAGTGTCATCAACTTTCTTACCCACAAAATATTGAACATACTTTTGAA
GTTTGAAGATGAGATGGACCAAAATGAATATTTACGGTCTTGCTTATCCCCAGAAAAAAATCAAATGAGAGCAGCAACAATTCTTGGTCACCTAAAGTCCAAAGCCTACT
CTGACTCGGAGTCTATAGAAAAGCACATCCGCGGTCTGACAGAACGTTTCTGGCGAGGGAAGGAGAAAGGACTATCTGATCTTTGCCTACTTGCTTTGTCATGTCTAACA
TCATTCATTCCAAGAAGCAGAGAAGCTGATGCAAGGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGGCCAGATTCCTTCCACTAGCTTCGTTCCACGACGATGGCTCGCTTATGAGCAAATCAGTGTCATCAACTTTCTTACCCACAAAATATTGAACATACTTTTGAA
GTTTGAAGATGAGATGGACCAAAATGAATATTTACGGTCTTGCTTATCCCCAGAAAAAAATCAAATGAGAGCAGCAACAATTCTTGGTCACCTAAAGTCCAAAGCCTACT
CTGACTCGGAGTCTATAGAAAAGCACATCCGCGGTCTGACAGAACGTTTCTGGCGAGGGAAGGAGAAAGGACTATCTGATCTTTGCCTACTTGCTTTGTCATGTCTAACA
TCATTCATTCCAAGAAGCAGAGAAGCTGATGCAAGGATATAG
Protein sequenceShow/hide protein sequence
MTGQIPSTSFVPRRWLAYEQISVINFLTHKILNILLKFEDEMDQNEYLRSCLSPEKNQMRAATILGHLKSKAYSDSESIEKHIRGLTERFWRGKEKGLSDLCLLALSCLT
SFIPRSREADARI