; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC03G045720 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC03G045720
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationCicolChr03:3794725..3797596
RNA-Seq ExpressionCcUC03G045720
SyntenyCcUC03G045720
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055297.1 RPM1-interacting protein 4 isoform X1 [Cucumis melo var. makuwa]1.0e-2758.54Show/hide
Query:  LAWNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT
        +A +TL VDWT GNIYSSS +   G                                     +DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT
Subjt:  LAWNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT

Query:  GTAANKVPQQRNEPVFNNESYPQ
        GTAAN VP++RNEPVFNNESYPQ
Subjt:  GTAANKVPQQRNEPVFNNESYPQ

KAE8652616.1 hypothetical protein Csa_013594 [Cucumis sativus]2.8e-3060Show/hide
Query:  NTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTA
        NTL V WTNGNIYSSS +   G                                     +D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTA
Subjt:  NTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTA

Query:  ANKVPQQRNEPVFNNESYPQYPPPK
        AN VPQ+RNEPVFNNESYPQYPPPK
Subjt:  ANKVPQQRNEPVFNNESYPQYPPPK

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]3.4e-2893.94Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AAN VP++RNEPVFNNESYPQYPPPK
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]2.0e-2895.45Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQ +EPVFNNESYPQYPPPK
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

XP_038894677.1 protein NOI4 isoform X2 [Benincasa hispida]2.0e-2895.45Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQ +EPVFNNESYPQYPPPK
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein6.3e-2881.25Show/hide
Query:  LIPPLPF-------QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        L  P PF       QD+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAAN VPQ+RNEPVFNNESYPQYPPPK
Subjt:  LIPPLPF-------QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

A0A1S3AYE6 RPM1-interacting protein 4 isoform X28.3e-2893.85Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AAN VP++RNEPVFNNESYPQYPPPK
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

A0A1S3AZ04 RPM1-interacting protein 4 isoform X11.7e-2893.94Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AAN VP++RNEPVFNNESYPQYPPPK
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

A0A5A7UL43 RPM1-interacting protein 4 isoform X14.9e-2858.54Show/hide
Query:  LAWNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT
        +A +TL VDWT GNIYSSS +   G                                     +DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT
Subjt:  LAWNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTT

Query:  GTAANKVPQQRNEPVFNNESYPQ
        GTAAN VP++RNEPVFNNESYPQ
Subjt:  GTAANKVPQQRNEPVFNNESYPQ

A0A6J1C5Z3 uncharacterized protein LOC111008714 isoform X21.4e-2755.12Show/hide
Query:  WNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPL-PFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
        W    V+ +NGNIYSS    P     N+A+   C  + ++    F++   + +L+  +  F+DRGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG
Subjt:  WNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPL-PFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG

Query:  TAANKVPQQRNEPVFNNESYPQYPPPK
        TAA+ V  QRNE ++NNE++PQY PPK
Subjt:  TAANKVPQQRNEPVFNNESYPQYPPPK

SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.5e-1362.12Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNE-PVFNNESYPQYPPPK
        D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PK
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNE-PVFNNESYPQYPPPK

Q8GYN5 RPM1-interacting protein 42.5e-0542.59Show/hide
Query:  LPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG--TAANKVPQQRNEPVFNNES
        +PKFG+WD NNP+SA+G+T IFNK R E+ +    + +++ P  ++    NN S
Subjt:  LPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG--TAANKVPQQRNEPVFNNES

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein6.7e-1458.46Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK
        D+GRPLPKFGEWDVN+P+SAEGFTVIFNKARNEKK  G + +     ++EP +N        P K
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPK

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-1489.47Show/hide
Query:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
        D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G
Subjt:  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein7.2e-1675.51Show/hide
Query:  LPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
        L D + P  ++D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G
Subjt:  LPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.6e-1557.14Show/hide
Query:  LPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNE-PVFNNESYPQYPPPK
        L D + P  ++D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PK
Subjt:  LPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQRNE-PVFNNESYPQYPPPK

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-1354.93Show/hide
Query:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANKV--PQQRNEPVFNNESYPQYPPPK
        +++G+PLPKFGEWDVNNPASAEGFTVIF+KA +EKKT   +G   N +  PQ+      NN    Q P  K
Subjt:  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANKV--PQQRNEPVFNNESYPQYPPPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATACTTAAATTCCTGTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCCAGTTC
AAGAAGACCATGGGGAGCTAAGTTTAATGCCGCTCTACGGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCTCTTTTATCCATCCATGTGCCTTACCTGACTTGA
TTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCACTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCT
AGAAATGAGAAGAAGACCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGT
TTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAATATCTTAAAGCCCGTAAAATTTCGCGGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCA
ACAACACCAACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATACTTAAATTCCTGTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCCAGTTC
AAGAAGACCATGGGGAGCTAAGTTTAATGCCGCTCTACGGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCTCTTTTATCCATCCATGTGCCTTACCTGACTTGA
TTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCACTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCT
AGAAATGAGAAGAAGACCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGT
TTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAATATCTTAAAGCCCGTAAAATTTCGCGGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCA
ACAACACCAACAAATGA
Protein sequenceShow/hide protein sequence
MLILKFLFFRGSLIREELAWNTLVVDWTNGNIYSSSSRRPWGAKFNAALRSVCGVLLKSDKSSFIHPCALPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKA
RNEKKTTGTAANKVPQQRNEPVFNNESYPQYPPPKVVLLWLKPQWLQDLEFVQYLKARKISRPCPTAGLYLSPNNTNK