; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G059490 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G059490
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionexosome complex component RRP43
Genome locationCicolChr04:356226..393389
RNA-Seq ExpressionCcUC04G059490
SyntenyCcUC04G059490
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-11392.86Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDGKVVFVSEEEGGENFEKE VNKE+RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDCVALTRQRSKELQMILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]4.0e-11491.6Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDC+ALTRQRSKELQ+ILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

XP_008460773.1 PREDICTED: exosome complex component RRP43 isoform X2 [Cucumis melo]4.0e-11491.6Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDC+ALTRQRSKELQ+ILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]5.2e-11493.28Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDCVALTRQRSKELQMILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

XP_038877146.1 exosome complex component RRP43 isoform X2 [Benincasa hispida]6.8e-11492.02Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTP IESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELS+VKGKAAWMAYLD+YCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH        IPVVALNDDGKV+FVSEEEGGENFEKEPVNKE+RKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDCVALTRQRSKELQMILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X11.9e-11491.6Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDC+ALTRQRSKELQ+ILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

A0A1S3CEE1 exosome complex component RRP43 isoform X21.9e-11491.6Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDC+ALTRQRSKELQ+ILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

A0A6J1DFM7 exosome complex component RRP431.5e-11190.34Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPSIESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKL+SIPFSLTC+LHK +ILADPTAEEES+METIVTVVLD S QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLA+TS+VQDCVALTRQR KELQ+ILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

A0A6J1ESF5 exosome complex component RRP439.6e-11492.86Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IP VALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDCVALTRQRSKELQMILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

A0A6J1HVL5 exosome complex component RRP436.2e-11392.44Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAIKMEVMTPSIESPDEGCIAVDFHMP ICSPIVRPGRPAEAAPVISKQLSDTI SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        AAFSH +      IPVVALNDDGKVVFVSEE+GGENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSS QLVSFYK G
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        GSVLAYTS+VQDCVALTRQRSKELQMILDEAISGM+ID
Subjt:  GSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp433.5e-2029.68Show/hide
Query:  LAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAA
        +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A V+S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  A
Subjt:  LAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAA

Query:  AFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAGG
        A           +P    ++D + V  +             +   R ++L++   S +  +    +LADPT EEE +    +T++L+SS  +V   K GG
Subjt:  AFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAGG

Query:  SVLAYTSSVQDCVALTRQR
        + +     ++ C+ + R +
Subjt:  SVLAYTSSVQDCVALTRQR

Q2KHU3 Exosome complex component RRP432.6e-2329.24Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        ++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA
        AA  + +      +P V +N++  +  V+              K+K  L + + P + +  +     ++ DPT EEE +    +TVV+D   +L   +K 
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA

Query:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM
        GGS L   + +QDC++    R KE++ ++DE    M
Subjt:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM

Q8TYC2 Exosome complex component Rrp422.2e-2230.09Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL EL + +G+  W+ ++DI+ LD DG+LFDA+++ + 
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG
        +A S  E      +P   + DD               E E + ++   L +N  P S+T     +Y+L DP  EEE +M+T +TV +  S ++ +  K  
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAG

Query:  GSVLAYTSS-VQDCVALTRQRSKELQ
        G +  +    ++D + L  ++++E++
Subjt:  GSVLAYTSS-VQDCVALTRQRSKELQ

Q96B26 Exosome complex component RRP431.6e-2529.66Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        ++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA
        AA  + +      +P V +N++  +  V+              K+K  L + + P + +  +     ++ DPT EEE +    +T+V+D   +L   +K 
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA

Query:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM
        GGS L   + +QDC++    R KE++ ++DE I  M
Subjt:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM

Q9D753 Exosome complex component RRP433.6e-2530.08Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        ++  +K E   P +++PD G +  +  +PP+CS   R G P E A V S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA
        AA  + +      +P V +N++  +  V+              K+K  L + + P + +  +     ++ DPT EEE +    +TVV D   +L   +K 
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKA

Query:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM
        GGS L   + +QDC++    R KE+  +LDE I  M
Subjt:  GGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein1.5e-9071.37Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA
        MLAAI+MEVMTPS +SPDEGCIA++FHMPPICSP VRPGRPAEAAPVISK+LSDTILSSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A 
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAA

Query:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFY
        AAFS+ +      IP+VALND+G++V V+ E+  +N    EKE VNKEKRKL L +IPFSLTC+LHK YILADPT EEES+M+T+VTVVLDSS Q+VSFY
Subjt:  AAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFY

Query:  KAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID
        K+GG+ LAY+S+++ CV L R+R+KEL+ IL E    MDID
Subjt:  KAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMDID

AT3G07750.1 3'-5'-exoribonuclease family protein6.7e-1125.31Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIL-----SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAA
        ++A++K E+  PS   PD+G +AV     P   P        E +  ++  L   +L     +   I+L  L + +GK  W  Y+D   + +DG+L DA 
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIL-----SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAA

Query:  LLSAAAAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVS
          +  AA ++        IP        KV   +E    E  E +  ++E  +   +S+P  +T      + + D TAEEES M + V++ ++ +  +  
Subjt:  LLSAAAAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVS

Query:  FYKAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMD
          K  GS L   S + D +++ +  ++ L   LD  IS  +
Subjt:  FYKAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMD

AT3G07750.2 3'-5'-exoribonuclease family protein6.7e-1125.31Show/hide
Query:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIL-----SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAA
        ++A++K E+  PS   PD+G +AV     P   P        E +  ++  L   +L     +   I+L  L + +GK  W  Y+D   + +DG+L DA 
Subjt:  MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTIL-----SSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAA

Query:  LLSAAAAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVS
          +  AA ++        IP        KV   +E    E  E +  ++E  +   +S+P  +T      + + D TAEEES M + V++ ++ +  +  
Subjt:  LLSAAAAFSHCERCWLAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVS

Query:  FYKAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMD
          K  GS L   S + D +++ +  ++ L   LD  IS  +
Subjt:  FYKAGGSVLAYTSSVQDCVALTRQRSKELQMILDEAISGMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTGCTATTAAAATGGAAGTCATGACGCCTTCTATAGAATCACCGGATGAGGGTTGCATAGCTGTTGATTTCCACATGCCTCCAATATGCTCTCCAATTGTTAG
GCCTGGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACCATTTTGAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAG
CTGCTTGGATGGCTTACTTGGATATTTACTGTTTGGATGCTGATGGATCTCTTTTTGATGCTGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTGTGAGCGCTGTTGG
TTGGCTATGATCCCTGTTGTTGCCTTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAATTTTGAGAAGGAACCTGTCAATAAAGAGAAGAG
GAAACTGAAATTGAACTCTATTCCTTTCTCATTAACATGCCTACTCCACAAGAAGTACATCTTGGCTGATCCTACTGCAGAGGAGGAGTCCGTGATGGAAACTATTGTGA
CCGTGGTTTTGGATTCATCTGCTCAACTGGTGTCCTTCTACAAAGCGGGTGGATCTGTTCTCGCTTATACATCATCTGTTCAGGATTGTGTTGCATTGACCAGACAAAGA
TCAAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGACATTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATCTTTAACTAGTCTAGGTTAAGTGGCGTGTGAGTGGGAAAAAGAAATTCTGAAAGTTCAGTCTTGCTTCACGAACGCCGCGCGAACAGACCTCCACCTCGCCACTCTCT
CTCTCTCTCACGCGAACTCTCCCTCGCCGCCATCCGCTGCGCAGCCACACTGCCTCCGCCGCCAGCCGGTCCGCCTCCGCCCGCCGTCGACCGCAGACGACTCTTTCCAA
TTCAGTTTTATGAGCGCCATCTTGCGGAATCAATACGTCCTGATGGAAGAGCACTTGGAAAAGCTAGAGACACAACCATTGCTCTTGGACCGGTATCATCTGCAAATGGG
TCAGCCCTGGCTAAGATTGGTTCGACGACAATGTTGGCTGCTATTAAAATGGAAGTCATGACGCCTTCTATAGAATCACCGGATGAGGGTTGCATAGCTGTTGATTTCCA
CATGCCTCCAATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACCATTTTGAGTTCTGGGATGATTGATC
TGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCTTACTTGGATATTTACTGTTTGGATGCTGATGGATCTCTTTTTGATGCTGCACTTCTTTCTGCAGCT
GCTGCATTTTCTCACTGTGAGCGCTGTTGGTTGGCTATGATCCCTGTTGTTGCCTTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAATTT
TGAGAAGGAACCTGTCAATAAAGAGAAGAGGAAACTGAAATTGAACTCTATTCCTTTCTCATTAACATGCCTACTCCACAAGAAGTACATCTTGGCTGATCCTACTGCAG
AGGAGGAGTCCGTGATGGAAACTATTGTGACCGTGGTTTTGGATTCATCTGCTCAACTGGTGTCCTTCTACAAAGCGGGTGGATCTGTTCTCGCTTATACATCATCTGTT
CAGGATTGTGTTGCATTGACCAGACAAAGATCAAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGACATTGACTAAGTTTTGGGTCTATCTCTTCTACC
TGTTTTAATTTGATGAATTGAATGGTGGATGGTTTATAGGCTTCCAATTTTACTTGTTTGGTTGCCTCCAGAATTTTGGTGGTGATATTTGTTTACCCTGGAGATTGTTT
TTGTTAGAATTTGGTCTCGGGAATCAATTTTTGTGCAGGGCTCTGATTTCTATGGCCAAATATCTATTTATTATTAATTGAAG
Protein sequenceShow/hide protein sequence
MLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTILSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHCERCW
LAMIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSAQLVSFYKAGGSVLAYTSSVQDCVALTRQR
SKELQMILDEAISGMDID