; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G059640 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G059640
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationCicolChr04:1051357..1057954
RNA-Seq ExpressionCcUC04G059640
SyntenyCcUC04G059640
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]1.6e-9572.69Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN
        MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K LVDS P  KT+TK + I   G   TLP+KSRD S  LP MN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN

Query:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  STSQSEL++LSMTA TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRK
Subjt:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS   Q SQLHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]1.8e-9976.49Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHY
        MMS EI+  NR DCDNQQITNY T+NSQP + HGG +  A+M KEEK  WAW KGLVDS P P+T+ K M+I   G ESTLP+KSRD S  LPLMNNEHY
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHY

Query:  DGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH
          STSQ EL+TLSMT  TSY YH PSYGGL S F FQTMHNS++ S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH
Subjt:  DGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH

Query:  ESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        ESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGSNIS LGSESMCNGS+  Q SQLHLSAYI
Subjt:  ESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]3.3e-8568.79Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR
        MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ WAW KGLV SGP PKT+ K MQ    PP+GGES   P+KSR
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR

Query:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE
        DASI LPLMNNEH   STS SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAE
Subjt:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE

Query:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        VENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Subjt:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]3.3e-8568.79Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR
        MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ WAW KGLV SGP PKT+ K MQ    PP+GGES   P+KSR
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR

Query:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE
        DASI LPLMNNEH   STS SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAE
Subjt:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE

Query:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        VENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Subjt:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]1.6e-9572.69Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN
        MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K LVDS P  KT+TK + I   G   TLP+KSRD S  LP MN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN

Query:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  STSQSEL++LSMTA TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRK
Subjt:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS   Q SQLHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit7.7e-9672.69Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN
        MMS EI+ RN  DCDNQQITNY+T+NSQP R HG      +  A M KEEK  WAW K LVDS P  KT+TK + I   G   TLP+KSRD S  LP MN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGA----TPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMN

Query:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK
        NEHY  STSQSEL++LSMTA TSY YH PSYGGL+S FGFQTMHNS+++      RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRK
Subjt:  NEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KKAE    +DDDD EGSNIS LGSESMCNGS   Q SQLHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit8.8e-10076.49Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHY
        MMS EI+  NR DCDNQQITNY T+NSQP + HGG +  A+M KEEK  WAW KGLVDS P P+T+ K M+I   G ESTLP+KSRD S  LPLMNNEHY
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHY

Query:  DGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH
          STSQ EL+TLSMT  TSY YH PSYGGL S F FQTMHNS++ S MAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH
Subjt:  DGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLH

Query:  ESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        ESRHLHAMRRERGCGGRF+SKKKK E   S+ DDDD EGSNIS LGSESMCNGS+  Q SQLHLSAYI
Subjt:  ESRHLHAMRRERGCGGRFVSKKKKAETRVSM-DDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit1.6e-8568.79Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR
        MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ WAW KGLV SGP PKT+ K MQ    PP+GGES   P+KSR
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR

Query:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE
        DASI LPLMNNEH   STS SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAE
Subjt:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE

Query:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        VENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Subjt:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit1.6e-8568.79Show/hide
Query:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR
        MMS   +YRNR  CDN Q      NYTTDNSQ W WHGG       T    M KE+++ WAW KGLV SGP PKT+ K MQ    PP+GGES   P+KSR
Subjt:  MMSPEIDYRNRRDCDNQQI----TNYTTDNSQPWRWHGG------ATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQI---PPRGGES-TLPHKSR

Query:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE
        DASI LPLMNNEH   STS SELVTL MTA TSY YH    GG+ M  FGFQT+ NSE++ + A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAE
Subjt:  DASIDLPLMNNEHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGL-MSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE

Query:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        VENRI+RSQ+KPYLHESRHLHAMRRERGCGGRFVSKKKK E+  SMDDD+  GSNIS LGSE M NGSS  + S LHLSAYI
Subjt:  VENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit1.1e-6257.78Show/hide
Query:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQ---IPPRGGESTLPHKSRDASIDLPLMNN
        MMS + DYR   D        Y   N QP  W G  T IA + KE+K  W W  GLVD+GP+P  +TK +Q    PP  GES +  +S+DASI LPLMNN
Subjt:  MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQ---IPPRGGESTLPHKSRDASIDLPLMNN

Query:  EHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP
        EHY  ST +        T  TSY Y+   YG LM  FGFQT+HNSE+       RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N+ISRSQ+KP
Subjt:  EHYDGSTSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI
        YLHESRHLHAMRRERGC GRFVSKKK  E   SM DD  +GSN+S          S+  Q S+LHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.1e-2142.29Show/hide
Query:  KSRDASIDLPLMNNEHYDG---STSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMA--QGRMALPLAMAEEPVYVNAKQYHGILRRR
        + RD+    P+ +  +Y+    S   S+  T +  A   Y Y  P Y  + +       +   H  +M   Q  + LP    EEPV+VNAKQYHGILRRR
Subjt:  KSRDASIDLPLMNNEHYDG---STSQSELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMA--QGRMALPLAMAEEPVYVNAKQYHGILRRR

Query:  QSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS
        QSRA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRF++ KK+ E     D    E SN+S  G  +M   S
Subjt:  QSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKKKAETRVSMDDDDVEGSNISTLGSESMCNGS

Q8VY64 Nuclear transcription factor Y subunit A-43.0e-2053.57Show/hide
Query:  MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK-----KAETRVSMDDDDVEGSNIS
        M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ +KPY+HESRHLHA+RR RGCGGRF++ KK     K E   + D++  E S  S
Subjt:  MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSKKK-----KAETRVSMDDDDVEGSNIS

Query:  TLGSESMCNGSS
        +L SE +   +S
Subjt:  TLGSESMCNGSS

Q93ZH2 Nuclear transcription factor Y subunit A-33.9e-2050.91Show/hide
Query:  AGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSI-MAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG
        A  S+ Y  P YGGL++A             + M  GR+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG
Subjt:  AGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSI-MAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG

Query:  CGGRFVSKKK
         GGRF++ KK
Subjt:  CGGRFVSKKK

Q945M9 Nuclear transcription factor Y subunit A-92.4e-2251.18Show/hide
Query:  ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA
        +LV  ++   +S  Y  P Y G+M A+G   +    +   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HA
Subjt:  ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA

Query:  MRRERGCGGRFVSK------KKKAETR
        MRR RG GGRF  K      K+KAE +
Subjt:  MRRERGCGGRFVSK------KKKAETR

Q9LXV5 Nuclear transcription factor Y subunit A-12.6e-2453.12Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.7e-2351.18Show/hide
Query:  ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA
        +LV  ++   +S  Y  P Y G+M A+G   +    +   M   RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPYLHESRH HA
Subjt:  ELVTLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHA

Query:  MRRERGCGGRFVSK------KKKAETR
        MRR RG GGRF  K      K+KAE +
Subjt:  MRRERGCGGRFVSK------KKKAETR

AT5G12840.1 nuclear factor Y, subunit A11.9e-2553.12Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.2 nuclear factor Y, subunit A11.9e-2553.12Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.3 nuclear factor Y, subunit A11.9e-2553.12Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM

AT5G12840.4 nuclear factor Y, subunit A11.9e-2553.12Show/hide
Query:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK
        Y  P YGGLM A+G Q +    +   M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF  K
Subjt:  YHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVSK

Query:  KKKAETRVSMDDDDVEGSNISTLGSESM
         +      +   D   GS  ++ GSE +
Subjt:  KKKAETRVSMDDDDVEGSNISTLGSESM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAAATCACAAACTACACCACCGATAATTCTCAACCATGGAGGTGGCACGGCGGCGCCAC
CCCTATTGCGGACATGTGGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGGTTTGGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATACCAC
CTCGAGGTGGAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGATCTTCCATTGATGAATAATGAACATTATGATGGTTCTACTTCCCAATCAGAGCTTGTT
ACTCTTTCAATGACAGCGGGTACATCGTACCTATACCACCACCCGTCCTATGGAGGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAACACAACAGCAT
AATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGG
CCGAAGTCGAAAATAGAATATCCAGATCACAGAGAAAGCCCTATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGC
AAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGCAGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACATTCA
AGCTTCCCAACTACATTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
CTATTAATCCTTTTATCTTCTCTCTCTTATATAAACCATTTTAATCTTTGCTTTGTGTTTGCCCATTTGCCACCTGTTGCCTTTCTCTCTCCCAACAAAAATTTCTCTCA
TTGGAAATCTAGAATTTTCTCCCTTCCCAAACACTCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTAATTTCTTCTTCTGCACAATCT
TTGAGGCTGTGTTTGGCAATTGGGTATCTCTTGGCTTTACAAAAATTCACTTTCTTTTTTATTATCCCAAACTTTCTTCCACTCCAAAACACTGTCTTGTGTTGAATTTC
AATTTCTTTTGGACCCCAAACGCTGGTCTTATCTTCTCTCTACTAAAATACTGCAAATGATGAGCCCTGAAATAGATTACAGAAACCGTCGAGACTGTGATAATCAGCAA
ATCACAAACTACACCACCGATAATTCTCAACCATGGAGGTGGCACGGCGGCGCCACCCCTATTGCGGACATGTGGAAAGAAGAAAAAGCATATTGGGCTTGGTCCAAGGG
TTTGGTTGACAGTGGGCCTCGGCCCAAAACAAACACCAAGGCAATGCAAATACCACCTCGAGGTGGAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGATC
TTCCATTGATGAATAATGAACATTATGATGGTTCTACTTCCCAATCAGAGCTTGTTACTCTTTCAATGACAGCGGGTACATCGTACCTATACCACCACCCGTCCTATGGA
GGACTGATGTCTGCATTTGGATTTCAAACAATGCATAATTCAGAACACAACAGCATAATGGCACAAGGTAGAATGGCTTTACCTCTAGCGATGGCGGAAGAACCTGTTTA
TGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGGCAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAGAGAAAGCCCTATCTTCATGAAT
CGAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAACTAGAGTTTCCATGGATGATGATGATGTGGAAGGC
AGCAACATCAGTACTTTAGGCTCTGAATCAATGTGCAATGGTAGCAGCTACATTCAAGCTTCCCAACTACATTTATCTGCATATATATGATTTGGTTTTGGTGCTATGGC
TTTGGGAACAACTTCTCCCTTTTCTTCCTCTACACGGAAGATGAACACAAAATGTATTAGGACCCAATGGATAACATATATATATATATATATATATATATTGTATTTAA
ACTTTTTAGTTTAATAGTTTCTTTTCTTTTTTTTCTTTTTTTTAATTGACCGAGT
Protein sequenceShow/hide protein sequence
MMSPEIDYRNRRDCDNQQITNYTTDNSQPWRWHGGATPIADMWKEEKAYWAWSKGLVDSGPRPKTNTKAMQIPPRGGESTLPHKSRDASIDLPLMNNEHYDGSTSQSELV
TLSMTAGTSYLYHHPSYGGLMSAFGFQTMHNSEHNSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFVS
KKKKAETRVSMDDDDVEGSNISTLGSESMCNGSSYIQASQLHLSAYI