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CcUC04G060080 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G060080
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:2563132..2563344
RNA-Seq ExpressionCcUC04G060080
SyntenyCcUC04G060080
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6743831.1 hypothetical protein POTOM_052534 [Populus tomentosa]8.9e-0654.55Show/hide
Query:  ILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        +L + +  + VSG   + APAPAPG +AG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  ILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

KAG6744821.1 hypothetical protein POTOM_051461 [Populus tomentosa]1.2e-0552.94Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        A++ ISKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAV+G SL LSLL  L+
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

KAG6769237.1 hypothetical protein POTOM_024855 [Populus tomentosa]1.4e-0655.71Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGV-ADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++ ISKAFL+   I A     ++VSG  ++  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGV-ADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

PNS97967.1 hypothetical protein POPTR_016G052400 [Populus trichocarpa]8.9e-0652.17Show/hide
Query:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        + ++ ISKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAVVG SL LSLL  L+
Subjt:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

TKR84116.1 hypothetical protein D5086_0000261490 [Populus alba]1.2e-0552.94Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        A++ ISKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAV+G SL LSLL  L+
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

TrEMBL top hitse value%identityAlignment
A0A2K1XB04 Uncharacterized protein4.3e-0652.17Show/hide
Query:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        + ++ ISKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAVVG SL LSLL  L+
Subjt:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

A0A4U5NMG4 Uncharacterized protein5.7e-0652.94Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR
        A++ ISKAF    F+L   +  ++VS    + APAPAPG +AG+GFSLP+SGAV+G SL LSLL  L+
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLR

A9P8U7 Uncharacterized protein9.7e-0652.17Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++ I KAFL+   I A     +  S   +  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

U5FKQ0 Uncharacterized protein7.4e-0648.57Show/hide
Query:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        MA+  I KA ++   +L + +  + VS    + APAPAPG +AG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

U7DW91 Uncharacterized protein7.4e-0649.28Show/hide
Query:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH
        A++ I KAFL+    L + +   + +  ++  APAPAPG EAG+GFSLP+SGA+VG SL++SLL  L+H
Subjt:  AKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCTTTTCATTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCC
TGCTCCGGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGCTTTTCATTTCCAAAGCCTTCTTGGTTGCCGCCTTCATCCTTGCCGTCTGCTCCACCGGCAGCTTGGTTTCTGGAGTCGCCGATGACTTCGCCCCGGCCCC
TGCTCCGGGGCGTGAGGCCGGATCTGGCTTCTCTCTGCCAATCTCCGGCGCCGTCGTTGGCTCCTCTCTTCTCCTTTCTCTTCTTCACCTTCTCAGGCATTGA
Protein sequenceShow/hide protein sequence
MAKLFISKAFLVAAFILAVCSTGSLVSGVADDFAPAPAPGREAGSGFSLPISGAVVGSSLLLSLLHLLRH