; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G060160 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G060160
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationCicolChr04:3006248..3010507
RNA-Seq ExpressionCcUC04G060160
SyntenyCcUC04G060160
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]3.4e-2492.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+R YPRFR+AFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]9.5e-2794.37Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+R YPRFR+AFSRLFASVFRVSYSRNLG
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2188.24Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LLR +A HTLRVYPRFR AFSRLFAS+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2283.1Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT R YPRFR+AFSR+F SVFRVSYSR+ G
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2283.1Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG
        MLQLFFAVAFSA PLT YVPPIRSL+LFVETLEDL RHTA HT R YPRFR+AFSR+F SVFRVSYSR+ G
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein4.6e-2794.37Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+R YPRFR+AFSRLFASVFRVSYSRNLG
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLG

A0A0D2MES3 Uncharacterized protein1.0e-1878.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS
        MLQLFF VAFSAVPLTLYVPPIRSLSLFVET+ED+LR T ++TLRVYPR R+ FSR+F S+FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 11.6e-2492.65Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLL HTAIHT+R YPRFR+AFSRLFAS FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSR

A0A5D2RVA8 Uncharacterized protein1.0e-1878.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS
        MLQLFF VAFSAVPLTLYVPPIRSLSLFVET+ED+LR T ++TLRVYPR R+ FSR+F S+FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS

A0A5J5SU59 Uncharacterized protein1.0e-1878.46Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS
        MLQLFF VAFSAVPLTLYVPPIRSLSLFVET+ED+LR T ++TLRVYPR R+ FSR+F S+FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein6.3e-1353.85Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS
        MLQLFF +AFSA PLTLY+PPIR L++FVET+E++     +++ R++PR R+A+SRL    F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTGACGCTCTATGTGCCGCCGATTCGAAGCCTCAGTCTGTTCGTTGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGTTTATCCTCGCTTCCGCGTTGCCTTCTCTCGCCTGTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGGAATCTTGGATATTGA
mRNA sequenceShow/hide mRNA sequence
TTTTATTTAAACAAAACGAGAGCAGGAAATCCCTTCCAATGGGCTCTCATAATTCCTTCAATTTTCCTCTTCAATTTTCCCACTGATTTCAATTCGGATAAACAGACAGG
TTTTTCCTTCCTTATCTTCTCACCCTCAATCTTTATATTAATCCAATCCTTCCCTCAAAATTCCGTCAAATTCTTCGCACTTGTTCATCTCTTATCCAACCAAAGCTCCA
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTGACGCTCTATGTGCCGCCGATTCGAAGCCTCAGTCTGTTCGTTGAAACCCTAGAAGATCTTCTCCG
TCACACCGCCATTCATACGCTCAGAGTTTATCCTCGCTTCCGCGTTGCCTTCTCTCGCCTGTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGGAATCTTGGATATTGAA
TGTTGAATCTCGCTTCGCTGTTGTACATGGAAGTGATATTTTGGTTTGGAATCATTCGTGATGATGGATTTTTGTTTCATTTCGGTCTTCTCCGATCTGTTCACAGCTTT
GGATTGTTTAGATTCTCTTCTTTTGTTCTTCCTTTTTCTTGTAATTAGGTAATCAGGATGCGCAATATGTTGAGAAGATTTATAAAATGGATTCAATTTTGTGAATACTC
GCTCTGTTAACTGTGGCTTTTCAGCCTTCACCAAACGCGGAAGAGGCAAGAACATGGCGTCGTTTAATTCCCAAAGAGGGCATGTCAAAAGAAATTTATAATACCAAATT
ACCTACATTACGTGGCGTAGTACAAGTGGCAAGTCTGAGTCGATCCACAAAGAAGCGCGCTATGTTTCATTAGGCCAATTCACTAGTTATAGGGAACAGGGATTGTGTGT
GGCATAGAATTAGGTGCGGAAAAATAAATTGAGAAAGTAAAATGAAGGGTAAATGTAATTTAGGGATGGATAATCTAGTTTGGGA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSRNLGY