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CcUC04G060250 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G060250
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionProtein TIC 214
Genome locationCicolChr04:3654385..3665945
RNA-Seq ExpressionCcUC04G060250
SyntenyCcUC04G060250
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9599033.1 hypothetical protein IFM89_033378 [Coptis chinensis]5.2e-2267.65Show/hide
Query:  RILLSLPSLSSGHGRRSREESISNNRILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRM
        R LLSLPSLSSG+GRR+RE      RI SPIVTKK KETS+ +E+G+SEEETDVEIETT +  GTKQEQEG  E+D S  L  EEK+DPDKIDE EEIR+
Subjt:  RILLSLPSLSSGHGRRSREESISNNRILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRM

Query:  EI
         +
Subjt:  EI

KAG5576166.1 hypothetical protein H5410_056300 [Solanum commersonii]3.4e-2159.35Show/hide
Query:  MHEDNQFGCCGRT-----HHILHRILLSLPSLSSGHGRRSREESISNNRILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDT
        MHEDNQFG CGRT      HILHR LLSLPS SSG G+R+REE              + ++TSE++E+ ESEEE DVEIET  +  GTKQEQEG  E+DT
Subjt:  MHEDNQFGCCGRT-----HHILHRILLSLPSLSSGHGRRSREESISNNRILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDT

Query:  --SHCLFLEEKKDPDKIDETEEI
          S  LF EE  DPDKIDETEEI
Subjt:  --SHCLFLEEKKDPDKIDETEEI

QZL38742.1 Ycf1 protein [Citrullus ecirrhosus]4.9e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

YP_009326048.1 Ycf1 [Citrullus lanatus]4.9e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

YP_009431615.1 Ycf1 [Citrullus amarus]4.9e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

TrEMBL top hitse value%identityAlignment
A0A1P8LE53 Ycf12.4e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

A0A1P8LFC3 Ycf12.4e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

A0A249RXF8 Protein TIC 2142.4e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

A0A343A8H0 Protein TIC 2142.4e-2078.48Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEGF E+DTS  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

A0A6N2K3S4 Uncharacterized protein7.6e-2759.86Show/hide
Query:  MHEDNQFGCCGRT-----HHILHRILLSLPSLSSGH---GRRSREESISNNR----------------------ILSPIVTKKRKETSEMEEKGESEEET
        MHEDNQFG CGRT      HILH  LLSLPS SSG+    RR+REE ISNNR                      I SPI TKK KETSE EE+   EEET
Subjt:  MHEDNQFGCCGRT-----HHILHRILLSLPSLSSGH---GRRSREESISNNR----------------------ILSPIVTKKRKETSEMEEKGESEEET

Query:  DVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIR
        DVEIETT +T GTKQEQEG  E+D S  LF EEK++PDKIDETEEIR
Subjt:  DVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIR

SwissProt top hitse value%identityAlignment
A6MM95 Protein TIC 2141.4e-1768.35Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        R+ +PIVTKK KETS+ EE+GESEEE DVEIETT +T GTKQEQE   E+D S  L  EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

A6MMG9 Protein TIC 2144.8e-1872.15Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE GESEEETDVEIETT +T GT++EQEG  E+D S C   EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

Q06GT8 Protein TIC 2141.9e-1973.42Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GESEEETDVEIETT +T GTKQEQEG  E+D S C   EEK+DPDK+DETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

Q0ZIW0 Protein TIC 2141.9e-1972.15Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPI+TKK KETSE EE+GESEEETDVEIE T +T GTKQEQE   E+D S  LF EEK+DPDKIDETEEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

Q49KU0 Protein TIC 2141.9e-1973.42Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK
        RI SPIVTKK KETSE EE+GE EEETDVEIETTF+T GT+QEQEG  E+D S  LF EEK+DPDKIDE EEIR+  K+
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKK

Arabidopsis top hitse value%identityAlignment
ATCG01000.1 Ycf1 protein4.0e-0444.87Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIK
        RI SPI TKK K TSE                    T GTKQ+QE   E+     LF EE +D DKIDE EEIR+  K
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIK

ATCG01130.1 Ycf1 protein4.0e-0444.87Show/hide
Query:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIK
        RI SPI TKK K TSE                    T GTKQ+QE   E+     LF EE +D DKIDE EEIR+  K
Subjt:  RILSPIVTKKRKETSEMEEKGESEEETDVEIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACCCCGAGAACAAATCCAATGGAGATAGGGTGGGGCTTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCATGGTGTCGAGGTATCCTTATGCAT
GAAGATAATCAATTCGGTTGTTGTGGTCGGACTCACCACATTCTCCATAGGATCCTCTTATCTCTTCCTTCTCTGAGCTCGGGTCATGGAAGAAGGAGCCGAGAA
GAAAGTATCAGCAACAACAGAATACTGTCACCCATTGTTACTAAGAAACGGAAAGAAACCTCAGAAATGGAGGAAAAGGGGGAAAGCGAGGAAGAAACAGATGTA
GAAATAGAGACCACTTTCAAAACGAACGGGACTAAACAAGAACAAGAAGGATTCATTGAAGATGATACTTCTCATTGCCTTTTTTTGGAAGAAAAAAAGGATCCC
GACAAAATCGATGAAACGGAAGAGATCCGAATGGAAATAAAGAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTACCCCGAGAACAAATCCAATGGAGATAGGGTGGGGCTTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCATGGTGTCGAGGTATCCTTATGCAT
GAAGATAATCAATTCGGTTGTTGTGGTCGGACTCACCACATTCTCCATAGGATCCTCTTATCTCTTCCTTCTCTGAGCTCGGGTCATGGAAGAAGGAGCCGAGAA
GAAAGTATCAGCAACAACAGAATACTGTCACCCATTGTTACTAAGAAACGGAAAGAAACCTCAGAAATGGAGGAAAAGGGGGAAAGCGAGGAAGAAACAGATGTA
GAAATAGAGACCACTTTCAAAACGAACGGGACTAAACAAGAACAAGAAGGATTCATTGAAGATGATACTTCTCATTGCCTTTTTTTGGAAGAAAAAAAGGATCCC
GACAAAATCGATGAAACGGAAGAGATCCGAATGGAAATAAAGAAAATTTGA
Protein sequenceShow/hide protein sequence
MEYPENKSNGDRVGLVAQRIRARGYEPWCRGILMHEDNQFGCCGRTHHILHRILLSLPSLSSGHGRRSREESISNNRILSPIVTKKRKETSEMEEKGESEEETDV
EIETTFKTNGTKQEQEGFIEDDTSHCLFLEEKKDPDKIDETEEIRMEIKKI