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CcUC04G060280 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G060280
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUBN2_3 domain-containing protein
Genome locationCicolChr04:3844957..3846758
RNA-Seq ExpressionCcUC04G060280
SyntenyCcUC04G060280
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]9.8e-1152.56Show/hide
Query:  MANVFPSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATA
        MAN  P   S       ++ +PPLNQ+LNQ+T+IKLDRSN+LLWK LA PI K Y+L GHL  EK  P  FV   ++A
Subjt:  MANVFPSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATA

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]8.3e-1048.65Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS
        PS++S G      +++PPLNQ+LNQ+T++KLDR N+LLWK LA PI K Y+L GHL +E   P  FV   ++++
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]8.3e-1048.65Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS
        PS++S G      +++PPLNQ+LNQ+T++KLDR N+LLWK LA PI K Y+L GHL +E   P  FV   ++++
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]8.3e-1048.65Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS
        PS++S G      +++PPLNQ+LNQ+T++KLDR N+LLWK LA PI K Y+L GHL +E   P  FV   ++++
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]9.8e-1158.73Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESP
        P V    V +   + SPPLNQLLNQITSIK+DR NFLLW+NLA PI +SY+LF +L  +K  P
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESP

TrEMBL top hitse value%identityAlignment
A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X44.0e-1048.65Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS
        PS++S G      +++PPLNQ+LNQ+T++KLDR N+LLWK LA PI K Y+L GHL +E   P  FV   ++++
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATAS

A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase4.0e-1053.23Show/hide
Query:  FTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQE
        F    +++PPLNQLLNQ++S+KLDR N+LLWK LA PI KSY+  GHL  E   P  F+  +
Subjt:  FTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQE

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase4.7e-1152.56Show/hide
Query:  MANVFPSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATA
        MAN  P   S       ++ +PPLNQ+LNQ+T+IKLDRSN+LLWK LA PI K Y+L GHL  EK  P  FV   ++A
Subjt:  MANVFPSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATA

A0A5D3BVJ1 Uncharacterized protein4.0e-1053.23Show/hide
Query:  FTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQE
        F    +++PPLNQLLNQ++S+KLDR N+LLWK LA PI KSY+  GHL  E   P  F+  +
Subjt:  FTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQE

A0A6J1DCW4 uncharacterized protein LOC1110195984.7e-1158.73Show/hide
Query:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESP
        P V    V +   + SPPLNQLLNQITSIK+DR NFLLW+NLA PI +SY+LF +L  +K  P
Subjt:  PSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGTCTTTCCTTCTGTCAACTCAAATGGAGTTTTTACTAACCCTACCTACAACAGCCCACCTCTAAATCAACTTTTAAACCAAATTACTTCCATCAAACTAGA
TAGGAGTAATTTTCTATTGTGGAAGAACTTAGCTCATCCTATTTTTAAGAGTTATCAGCTGTTTGGACATCTCATTAGTGAGAAGGAATCTCCCCGTATGTTTGTTCAAC
AGGAAGCTACTGCCTCTATTTTGCATCAAAGGCTTGGACATCCTTCCTTAAAAGTCCTGAATGATGTTGTT
mRNA sequenceShow/hide mRNA sequence
AGCTTTCTTTACGTTTCCTCCTCTTTGGTGGTTTTCCCTTTGGAAACAAACTTTATCTTGGTATCAGAGCCTCCCCTATGGCCAACGTCTTTCCTTCTGTCAACTCAAAT
GGAGTTTTTACTAACCCTACCTACAACAGCCCACCTCTAAATCAACTTTTAAACCAAATTACTTCCATCAAACTAGATAGGAGTAATTTTCTATTGTGGAAGAACTTAGC
TCATCCTATTTTTAAGAGTTATCAGCTGTTTGGACATCTCATTAGTGAGAAGGAATCTCCCCGTATGTTTGTTCAACAGGAAGCTACTGCCTCTATTTTGCATCAAAGGC
TTGGACATCCTTCCTTAAAAGTCCTGAATGATGTTGTT
Protein sequenceShow/hide protein sequence
MANVFPSVNSNGVFTNPTYNSPPLNQLLNQITSIKLDRSNFLLWKNLAHPIFKSYQLFGHLISEKESPRMFVQQEATASILHQRLGHPSLKVLNDVV