; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G061200 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G061200
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationCicolChr04:9006871..9007284
RNA-Seq ExpressionCcUC04G061200
SyntenyCcUC04G061200
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]5.8e-4157.66Show/hide
Query:  MNSSLALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNF
        M SSLAL F +  +L I LHA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F
Subjt:  MNSSLALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNF

Query:  HRDANRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
         RD   CT+C W +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]4.1e-3956.39Show/hide
Query:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA
        +AL F +  +L I LHA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD 
Subjt:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA

Query:  NRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
          CT+C W +Y  GPCL H + + T   CFPWN
Subjt:  NRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

EXB68036.1 hypothetical protein L484_009643 [Morus notabilis]8.4e-2441.98Show/hide
Query:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANR
        + +V  ++F+ +  +E S  LL +T V   N L    L +HC+SK+DDLG H++    SY FSFR N WGTT F CSF+W   +   F I++  +  A+ 
Subjt:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANR

Query:  CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
        CT+C W ++ +G C M P + G YN+CFPWN
Subjt:  CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]8.6e-3756.45Show/hide
Query:  MLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWE
        +L I L A +E ISLLPETTV  +N++ GP+L +HCRSK DDLGV+++  ++SYSF+F PN+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W 
Subjt:  MLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWE

Query:  IYRDGPCLMHPKDTGTYNMCFPWN
        IY  GPCL H K + T   CFPWN
Subjt:  IYRDGPCLMHPKDTGTYNMCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]3.3e-3657.89Show/hide
Query:  ESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMH
        E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPN+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H
Subjt:  ESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMH

Query:  PKDTGTYNMCFPWN
         + + T   CFPWN
Subjt:  PKDTGTYNMCFPWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog1.6e-3657.89Show/hide
Query:  ESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMH
        E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPN+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W +Y  GPCL H
Subjt:  ESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMH

Query:  PKDTGTYNMCFPWN
         + + T   CFPWN
Subjt:  PKDTGTYNMCFPWN

A0A5A7TXE8 S-protein homolog4.2e-3756.45Show/hide
Query:  MLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWE
        +L I L A +E ISLLPETTV  +N++ GP+L +HCRSK DDLGV+++  ++SYSF+F PN+WGTT F C F+WV+G+ H F+IY+F RD   CT+C W 
Subjt:  MLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWE

Query:  IYRDGPCLMHPKDTGTYNMCFPWN
        IY  GPCL H K + T   CFPWN
Subjt:  IYRDGPCLMHPKDTGTYNMCFPWN

B0F817 S-protein homolog2.8e-4157.66Show/hide
Query:  MNSSLALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNF
        M SSLAL F +  +L I LHA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F
Subjt:  MNSSLALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNF

Query:  HRDANRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
         RD   CT+C W +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

B0F818 S-protein homolog2.0e-3956.39Show/hide
Query:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA
        +AL F +  +L I LHA +E ISLLPETTVT +N++ GP+L +HCRSK DDLGV+++  ++SYSF+FRPNVWGTT F C F+WV+G+ H F+IY+F RD 
Subjt:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA

Query:  NRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
          CT+C W +Y  GPCL H + + T   CFPWN
Subjt:  NRCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

W9RF60 S-protein homolog4.0e-2441.98Show/hide
Query:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANR
        + +V  ++F+ +  +E S  LL +T V   N L    L +HC+SK+DDLG H++    SY FSFR N WGTT F CSF+W   +   F I++  +  A+ 
Subjt:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD-ANR

Query:  CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
        CT+C W ++ +G C M P + G YN+CFPWN
Subjt:  CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.2e-1842.02Show/hide
Query:  SLLPETTVTT-INKLAGPVLNL--HCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CMWEIYRDG
        S+ P +  T  IN   G  L L  HC+SKDDDLG   ++   S+SFSF    +G T + CSF W   E H+F IY  HRD+   N+C    C+W+I R+G
Subjt:  SLLPETTVTT-INKLAGPVLNL--HCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CMWEIYRDG

Query:  PCLMHPKDTGTYNMCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLMHPKDTGTYNMCFPWN

F4JZG1 S-protein homolog 41.0e-1637.41Show/hide
Query:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPN-VWGTTQFSCSFQWVQGEIHNFSIYNFHR
        + +I+L++Q+ F  +    +      ++ VT  N+L  G  L LHC+S DDDLG+ I+    S+SF FRP+ V G T F C F W  G+   F+IY+  R
Subjt:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPN-VWGTTQFSCSFQWVQGEIHNFSIYNFHR

Query:  DANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
        D  R    C  C+W+I + GPC     D   +N+C+ WN
Subjt:  DANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

O23020 S-protein homolog 52.4e-2647.62Show/hide
Query:  TTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMHPKDTGTYN
        T VT  N + GP L +HC+SK DDLG+H++ F++ Y F F+PN+W +T F CSFQW   +  +F IY+  RD   C DC WEI  DGPC +     G   
Subjt:  TTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMHPKDTGTYN

Query:  MCFPW
         CFPW
Subjt:  MCFPW

P0DN93 S-protein homolog 291.9e-1532.59Show/hide
Query:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR
        IF+VL ++   + ++    +   +T VT  N ++    L + CRSKDDDLG H++   +++ + FRP+ + TT F+C F W    +  F  Y   RD   
Subjt:  IFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANR

Query:  CTDCMWEIYRDGPCLMHPKDTGTYN----MCFPWN
        C  C W I  D  C+     +G +N     C+PWN
Subjt:  CTDCMWEIYRDGPCLMHPKDTGTYN----MCFPWN

Q9FMQ4 S-protein homolog 37.1e-1836.23Show/hide
Query:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD
        + +I+L++++ F  +   +  ++      V   N+L  G  LNLHC+S DDDLG+ I+    S+SF FR ++ GTT F C F W  G+   F IY+  RD
Subjt:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD

Query:  ANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
          R    C +C+W+I   GPC+    D   +N+C+ WN
Subjt:  ANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.7e-2747.62Show/hide
Query:  TTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMHPKDTGTYN
        T VT  N + GP L +HC+SK DDLG+H++ F++ Y F F+PN+W +T F CSFQW   +  +F IY+  RD   C DC WEI  DGPC +     G   
Subjt:  TTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDANRCTDCMWEIYRDGPCLMHPKDTGTYN

Query:  MCFPW
         CFPW
Subjt:  MCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family1.2e-2042.48Show/hide
Query:  PETTVTTINKLAGPV-LNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDAN----RCTDCMWEIYRDGPCLMHP
        P TTV   N L G + L  HC+SK+DDLG   +    ++SF FRP+V+G T F C F W   E+H F IY   RD       C  C W+I +DGPC ++ 
Subjt:  PETTVTTINKLAGPV-LNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDAN----RCTDCMWEIYRDGPCLMHP

Query:  KDTGTYNMCFPWN
        K++  +++C PWN
Subjt:  KDTGTYNMCFPWN

AT3G17080.1 Plant self-incompatibility protein S1 family7.3e-1836.43Show/hide
Query:  MLFIGLHAAEESISLLPETTVTTINKLAGPV-LNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDAN----RCT
        +LF  +     +I     T+V   N L G + L  HC+S++DDLG   +   RS+SF F P+++G T F C F W   E H F IY   RD       C 
Subjt:  MLFIGLHAAEESISLLPETTVTTINKLAGPV-LNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDAN----RCT

Query:  DCMWEIYRDGPCLMHPKDTGTYNMCFPWN
         C W+I ++GPC  + K TG ++ C+ W+
Subjt:  DCMWEIYRDGPCLMHPKDTGTYNMCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family2.3e-1942.02Show/hide
Query:  SLLPETTVTT-INKLAGPVLNL--HCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CMWEIYRDG
        S+ P +  T  IN   G  L L  HC+SKDDDLG   ++   S+SFSF    +G T + CSF W   E H+F IY  HRD+   N+C    C+W+I R+G
Subjt:  SLLPETTVTT-INKLAGPVLNL--HCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDA---NRCTD--CMWEIYRDG

Query:  PCLMHPKDTGTYNMCFPWN
        PC  +  +T  +++C+PWN
Subjt:  PCLMHPKDTGTYNMCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family5.1e-1936.23Show/hide
Query:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD
        + +I+L++++ F  +   +  ++      V   N+L  G  LNLHC+S DDDLG+ I+    S+SF FR ++ GTT F C F W  G+   F IY+  RD
Subjt:  LALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLA-GPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRD

Query:  ANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN
          R    C +C+W+I   GPC+    D   +N+C+ WN
Subjt:  ANR----CTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCATCCTTAGCACTTATATTCTTGGTTTTACAAATGTTGTTCATCGGCCTGCATGCTGCTGAAGAATCAATCTCACTTTTGCCAGAAACAACAGTGACC
ACTATTAATAAATTGGCTGGCCCAGTGCTAAACCTTCATTGTAGATCAAAAGACGATGACTTGGGAGTCCATATCATAGAGTTTGAACGCAGTTACTCCTTTAGC
TTTAGACCTAATGTTTGGGGCACAACGCAATTTTCTTGCAGCTTTCAATGGGTCCAAGGCGAGATCCACAACTTCTCAATCTACAATTTTCACAGAGATGCAAAT
CGTTGCACTGACTGCATGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAATATGTGCTTCCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTCATCCTTAGCACTTATATTCTTGGTTTTACAAATGTTGTTCATCGGCCTGCATGCTGCTGAAGAATCAATCTCACTTTTGCCAGAAACAACAGTGACC
ACTATTAATAAATTGGCTGGCCCAGTGCTAAACCTTCATTGTAGATCAAAAGACGATGACTTGGGAGTCCATATCATAGAGTTTGAACGCAGTTACTCCTTTAGC
TTTAGACCTAATGTTTGGGGCACAACGCAATTTTCTTGCAGCTTTCAATGGGTCCAAGGCGAGATCCACAACTTCTCAATCTACAATTTTCACAGAGATGCAAAT
CGTTGCACTGACTGCATGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAATATGTGCTTCCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MNSSLALIFLVLQMLFIGLHAAEESISLLPETTVTTINKLAGPVLNLHCRSKDDDLGVHIIEFERSYSFSFRPNVWGTTQFSCSFQWVQGEIHNFSIYNFHRDAN
RCTDCMWEIYRDGPCLMHPKDTGTYNMCFPWN