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CcUC04G061460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G061460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDUF659 domain-containing protein
Genome locationCicolChr04:10842214..10867636
RNA-Seq ExpressionCcUC04G061460
SyntenyCcUC04G061460
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8369944.1 hypothetical protein HHK36_032026 [Tetracentron sinense]1.7e-0862Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        +KGR+L+R  VT+FAT +LTL+S+ + K GL  MFGSEDWQRS+YAK+ D
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
KAF8379081.1 hypothetical protein HHK36_028509 [Tetracentron sinense]1.7e-0838.78Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDEFERSVYRQSLEGNSRLTLQTDFKFDYQIGKASFLRIHDIADEPCLDY
        ++GR+L+R  VTQFAT +LTL+S+ + K GL  MFGSEDWQRS YAK+ D       R  +  NS       +     +     L++ D  + P + Y
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDEFERSVYRQSLEGNSRLTLQTDFKFDYQIGKASFLRIHDIADEPCLDY
XP_030945716.1 uncharacterized protein LOC115970195 [Quercus lobata]1.6e-0966.67Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE
        +KGREL R GVT+FAT+Y TL+SI + KIGLR+MF SE+W +S YAKKSD+
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE
XP_030945885.1 uncharacterized protein LOC115970382 [Quercus lobata]3.5e-0968Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        +KGREL R GVT+FAT+YLTL+SI + KIGLR+ F SE+W +S YAKKSD
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
XP_030969699.1 uncharacterized protein LOC115989976 [Quercus lobata]7.1e-1070Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        +KGREL R GVT+FAT+YLTL+SI + KIGLR+MF SE+W +S YAKKSD
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
TrEMBL top hitse value%identityAlignment
A0A3S3NB18 Uncharacterized protein9.3e-0858Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        +KGRELIRA VT+FAT++LTL+SI E ++ LR+MF S++W+ S+Y+K  D
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
A0A5B7APW2 DUF659 domain-containing protein (Fragment)6.5e-0967.35Show/hide
Query:  KGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        KG+EL+R  VT+FATSYLTLR + E K  LRAMF SE+WQRS Y+KK D
Subjt:  KGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
A0A6P5G6H4 uncharacterized protein LOC1097209523.5e-0756.25Show/hide
Query:  GRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        GREL+R+G+T+FAT+++ L SI +NK GL++MF S+DWQ S YA  +D
Subjt:  GRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
A0A6P5GUX7 uncharacterized protein LOC1097250304.6e-0755.1Show/hide
Query:  GRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE
        GREL+R G+T+FAT+++ L SI +NK GL++MF S++WQ S YA  +DE
Subjt:  GRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE
A0A7N2L2I3 Uncharacterized protein3.4e-1070Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
        +KGREL R GVT+FAT+YLTL+SI + KIGLR+MF SE+W +S YAKKSD
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17450.1 hAT dimerisation domain-containing protein8.1e-0437.25Show/hide
Query:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE
        ++G +L+R  V + A+ + TL+S+ ++K  LR +F S+ W  S  A KS+E
Subjt:  SKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAAGGGAGAGAATTGATAAGGGCTGGTGTGACACAATTTGCAACTTCTTACTTGACTTTGCGAAGCATAGCAGAAAATAAAATAGGTTTGAGGGCAATG
TTTGGATCTGAAGATTGGCAAAGAAGCAACTATGCAAAAAAGTCTGACGAGTTTGAAAGATCCGTCTATCGCCAATCTCTTGAGGGCAATTCTCGACTAACGCTG
CAAACGGATTTCAAGTTCGACTATCAAATCGGGAAGGCATCATTCCTCCGCATCCATGACATTGCAGATGAACCGTGTTTGGATTACAGCGAAATCCAGCATATT
CAGTACCTGGAAAATGTCTTCTTCTTCGGCGAGACCGCCTTTTCCAGGGAAGTCTTAAAGCCAATGCAGGGGCTTCTTTTTAAGGCCGCAACTGGATTTTGTGAG
AAACTCGGCCGATGTTGTCGGAAGATAGGAAGAGGATTGCCGGAGACACGGAGGAGAAGTGGGGGAGAAAGGAGGAAGGAAAGAGGAGAGAGGAGAGAGAAGATA
GAACTTACCTTTGGTGTTGGTGTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAAGGGAGAGAATTGATAAGGGCTGGTGTGACACAATTTGCAACTTCTTACTTGACTTTGCGAAGCATAGCAGAAAATAAAATAGGTTTGAGGGCAATG
TTTGGATCTGAAGATTGGCAAAGAAGCAACTATGCAAAAAAGTCTGACGAGTTTGAAAGATCCGTCTATCGCCAATCTCTTGAGGGCAATTCTCGACTAACGCTG
CAAACGGATTTCAAGTTCGACTATCAAATCGGGAAGGCATCATTCCTCCGCATCCATGACATTGCAGATGAACCGTGTTTGGATTACAGCGAAATCCAGCATATT
CAGTACCTGGAAAATGTCTTCTTCTTCGGCGAGACCGCCTTTTCCAGGGAAGTCTTAAAGCCAATGCAGGGGCTTCTTTTTAAGGCCGCAACTGGATTTTGTGAG
AAACTCGGCCGATGTTGTCGGAAGATAGGAAGAGGATTGCCGGAGACACGGAGGAGAAGTGGGGGAGAAAGGAGGAAGGAAAGAGGAGAGAGGAGAGAGAAGATA
GAACTTACCTTTGGTGTTGGTGTAATGTAA
Protein sequenceShow/hide protein sequence
MSKGRELIRAGVTQFATSYLTLRSIAENKIGLRAMFGSEDWQRSNYAKKSDEFERSVYRQSLEGNSRLTLQTDFKFDYQIGKASFLRIHDIADEPCLDYSEIQHI
QYLENVFFFGETAFSREVLKPMQGLLFKAATGFCEKLGRCCRKIGRGLPETRRRSGGERRKERGERREKIELTFGVGVM