; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G061630 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G061630
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransmembrane protein
Genome locationCicolChr04:11691837..11704917
RNA-Seq ExpressionCcUC04G061630
SyntenyCcUC04G061630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647791.1 hypothetical protein Csa_004224 [Cucumis sativus]7.3e-3297.1Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

KAG7027560.1 hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-3354.14Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGSVAKRAGFEKKKERVFDAINSAPSLNDSQALF
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIG                                
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGSVAKRAGFEKKKERVFDAINSAPSLNDSQALF

Query:  DGEINVGGALDGQTLSTLGQGNQSFIHDCPLLSGNNLSHLQAPPVIVFSSACAGMTG
                      +STL       +    ++   +  + QAPPVIVFSSACAGM G
Subjt:  DGEINVGGALDGQTLSTLGQGNQSFIHDCPLLSGNNLSHLQAPPVIVFSSACAGMTG

XP_011658376.1 uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus]7.3e-3297.1Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

XP_031744138.1 uncharacterized protein LOC105435977 isoform X2 [Cucumis sativus]7.3e-3297.1Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

XP_038882424.1 uncharacterized protein LOC120073695 [Benincasa hispida]1.6e-3197.1Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

TrEMBL top hitse value%identityAlignment
A0A1S4E0V5 uncharacterized protein LOC1034959681.8e-3195.65Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

A0A6J1D6Q7 uncharacterized protein LOC111018136 isoform X25.1e-3192.75Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN+VMP+V+RSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

A0A6J1D7Q1 uncharacterized protein LOC111018136 isoform X15.1e-3192.75Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN+VMP+V+RSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

A0A6J1EAN3 uncharacterized protein LOC1114323921.3e-3195.65Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        MRCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

A0A6J1HN28 uncharacterized protein LOC1114661173.9e-3194.2Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        +RCQHCAGPLSKDMETSAWT+PPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIG+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein9.3e-0935.82Show/hide
Query:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG
        RC  C   L+ + E   WT+ P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G
Subjt:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG

AT2G41945.2 unknown protein9.3e-0935.82Show/hide
Query:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG
        RC  C   L+ + E   WT+ P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G
Subjt:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG

AT2G41945.3 unknown protein9.3e-0935.82Show/hide
Query:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG
        RC  C   L+ + E   WT+ P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G
Subjt:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIG

AT3G04040.1 unknown protein3.4e-2773.53Show/hide
Query:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        RC HCAGPL+K++ET+ WTV P IRDSFSMIGSAVGGTASAF GF++VMP+V++ +KGPMWLHFL+G+
Subjt:  RCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS

AT5G18250.1 unknown protein2.0e-2772.46Show/hide
Query:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS
        +RC HCAGPL++++ETS WTV P IRDSFSMIGSAVGGTASAF GFN+ MP+V++ +KGPMWLHFL+G+
Subjt:  MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACGGTTCCTCCTCTCATTAGGGATAGTTTCTCTATGATTGGCTCTGCT
GTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAATAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTAGTGTT
GCCAAACGTGCTGGTTTTGAGAAAAAAAAGGAAAGGGTTTTTGATGCAATTAATTCGGCTCCTTCATTAAATGATAGTCAGGCCCTATTTGACGGTGAGATTAAT
GTTGGGGGAGCCTTGGATGGTCAGACCCTCAGTACTCTTGGTCAAGGAAATCAGAGTTTCATCCATGACTGTCCTCTTTTGAGTGGAAACAATTTATCTCACTTG
CAGGCTCCTCCAGTGATTGTATTTTCTTCAGCTTGTGCAGGAATGACAGGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAAAAGGAAAAAAAAAAAAAAGAGTTGCCCTAGCCTCCATCATCTTCTTCCCTTCCCGTGTAGCCGTCGACCACCCCCCTCCTTCGGTCTTTTTCGT
CGTTGGCCACACAACAAACCCACAAGTAGCAGCTGACCACTAACTCGACGACCAGTCCTTGCACCTCAGTTTGACGTGGTCCTGCACGATCATTTGCTCAACGAC
AACTGGAGTTTCGCACCAACATGAATGCCCATCTTTTAAGTTGATTGCATGCAGTCTACATTCACCCACGAATCTGACTTCCGTTCTGAGTGCAACTCCGACGAT
TTTTTTTGGGCTTTAGAAGTACCATTTCTTCTTTGTTTGAGAATCCAACGTGAACAATAAGTTGTGCGTCACGTTTTCGACGACTGGGTTTCTTGCAGCAGCGTT
TTTGACTTGGGGGGATAGTGAGAACAAGCAACAAGGAAAGGGATATAACAAACAACCTTACTAGAAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTTT
CAAAGGATATGGAAACAAGTGCTTGGACGGTTCCTCCTCTCATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGAT
TTAATAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTAGTGTTGCCAAACGTGCTGGTTTTGAGAAAAAAAAGG
AAAGGGTTTTTGATGCAATTAATTCGGCTCCTTCATTAAATGATAGTCAGGCCCTATTTGACGGTGAGATTAATGTTGGGGGAGCCTTGGATGGTCAGACCCTCA
GTACTCTTGGTCAAGGAAATCAGAGTTTCATCCATGACTGTCCTCTTTTGAGTGGAAACAATTTATCTCACTTGCAGGCTCCTCCAGTGATTGTATTTTCTTCAG
CTTGTGCAGGAATGACAGGTTAG
Protein sequenceShow/hide protein sequence
MRCQHCAGPLSKDMETSAWTVPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGSVAKRAGFEKKKERVFDAINSAPSLNDSQALFDGEIN
VGGALDGQTLSTLGQGNQSFIHDCPLLSGNNLSHLQAPPVIVFSSACAGMTG