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CcUC04G062030 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G062030
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionThreonine-tRNA ligase
Genome locationCicolChr04:14304191..14306989
RNA-Seq ExpressionCcUC04G062030
SyntenyCcUC04G062030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595681.1 hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3076.47Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G ++DL QTLKPF++RASEAEDRLSRLE ALLSK+D H+++HL+TISELQSKLDSANEALI E+K    KAEMVAAENAKLQYRI+HLVR AR 
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
XP_008464609.1 PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo]2.0e-3382.35Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP GG N+DL QTLKPFFQRAS+AEDRLSRLE ALLSK+D HN++HL+TISELQ+KLDSAN ALIEERK    KAEMVA ENAKLQYRIIHLVRTARE
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
XP_022925102.1 uncharacterized protein LOC111432443 [Cucurbita moschata]2.3e-2976.24Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G ++DL QTLKPF++RASEAEDRLSRLE ALLSK+D H+++HL+TISELQSKLDSANEALI E+K    KAEMVAAENAKLQYRI+HLVR AR 
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  T
        T
Subjt:  T
XP_022966502.1 uncharacterized protein LOC111466136 [Cucurbita maxima]9.3e-3177.45Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G ++DL QTLKPF+QRASEAEDRLSRLE ALLSK+D H+++HL+TISELQSKLDSANEALI E+K    KAEMVAAENAKLQYRI+HLVR AR 
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
XP_038880780.1 uncharacterized protein LOC120072495 [Benincasa hispida]2.1e-3079.41Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAE  G  N+DL Q LKPFFQRASEAEDRLSRLE ALL+K+DVHN+++L TISELQSKLD ANE LI ERK    KAEMVAAENAKLQYRIIHLVRTARE
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
TrEMBL top hitse value%identityAlignment
A0A1S3CLW0 uncharacterized protein LOC103502450 isoform X29.7e-3482.35Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP GG N+DL QTLKPFFQRAS+AEDRLSRLE ALLSK+D HN++HL+TISELQ+KLDSAN ALIEERK    KAEMVA ENAKLQYRIIHLVRTARE
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
A0A1S3CM07 uncharacterized protein LOC103502450 isoform X12.2e-2281.08Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKAN
        MAEP GG N+DL QTLKPFFQRAS+AEDRLSRLE ALLSK+D HN++HL+TISELQ+KLDSAN ALIEERKKA+
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKAN
A0A6J1DM00 uncharacterized protein LOC1110212881.1e-2976.47Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G  +DL Q+LKPFFQRASEAEDRLSRLE  LLSK+D  +++HL+TI+ELQSKLDSANEALI ERK    KAE+VAAENAKLQYRIIHLVRTARE
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
         H
Subjt:  TH
A0A6J1EAW7 uncharacterized protein LOC1114324431.1e-2976.24Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G ++DL QTLKPF++RASEAEDRLSRLE ALLSK+D H+++HL+TISELQSKLDSANEALI E+K    KAEMVAAENAKLQYRI+HLVR AR 
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  T
        T
Subjt:  T
A0A6J1HN54 uncharacterized protein LOC1114661364.5e-3177.45Show/hide
Query:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        MAEP  G ++DL QTLKPF+QRASEAEDRLSRLE ALLSK+D H+++HL+TISELQSKLDSANEALI E+K    KAEMVAAENAKLQYRI+HLVR AR 
Subjt:  MAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE

Query:  TH
        TH
Subjt:  TH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57320.1 unknown protein8.7e-1141.94Show/hide
Query:  NYDLVQTLKPFFQRASEAEDRLSRLEDALLS-KEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
        ++ L + LKPFF RA+EA++RL++LE AL S K D+ +   ++   +LQSKL+ AN  +    K+   K + +  ENAK +YRI+HLVR  ++
Subjt:  NYDLVQTLKPFFQRASEAEDRLSRLEDALLS-KEDVHNKDHLQTISELQSKLDSANEALIEERKKANAKAEMVAAENAKLQYRIIHLVRTARE
AT3G57320.2 unknown protein2.9e-0643.08Show/hide
Query:  NYDLVQTLKPFFQRASEAEDRLSRLEDALLS-KEDVHNKDHLQTISELQSKLDSANEALIEERKK
        ++ L + LKPFF RA+EA++RL++LE AL S K D+ +   ++   +LQSKL+ AN  + +E+ K
Subjt:  NYDLVQTLKPFFQRASEAEDRLSRLEDALLS-KEDVHNKDHLQTISELQSKLDSANEALIEERKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTAAACAAACACCCTTCCAAAACTTGGGCGTATTTTGGTACATAAAATATCTTTATCCCAAAAGCGTCCTCTTAGCATCTTCTTTCGAAGTTGGAAGTTTGGCAACAAT
GGCGGAACCATTTGGCGGCGTCAACTACGATCTTGTGCAGACCTTGAAGCCCTTCTTCCAAAGAGCTTCTGAAGCTGAGGATCGTTTGTCGAGATTAGAAGATGCACTCT
TGAGTAAGGAAGACGTCCATAACAAAGATCATCTGCAAACAATAAGCGAACTCCAGTCGAAGCTAGACAGCGCAAACGAAGCACTAATCGAAGAACGGAAAAAGGCAAAT
GCAAAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTTCAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCCAT
mRNA sequenceShow/hide mRNA sequence
ACTAAACAAACACCCTTCCAAAACTTGGGCGTATTTTGGTACATAAAATATCTTTATCCCAAAAGCGTCCTCTTAGCATCTTCTTTCGAAGTTGGAAGTTTGGCAACAAT
GGCGGAACCATTTGGCGGCGTCAACTACGATCTTGTGCAGACCTTGAAGCCCTTCTTCCAAAGAGCTTCTGAAGCTGAGGATCGTTTGTCGAGATTAGAAGATGCACTCT
TGAGTAAGGAAGACGTCCATAACAAAGATCATCTGCAAACAATAAGCGAACTCCAGTCGAAGCTAGACAGCGCAAACGAAGCACTAATCGAAGAACGGAAAAAGGCAAAT
GCAAAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTTCAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCCAT
Protein sequenceShow/hide protein sequence
TKQTPFQNLGVFWYIKYLYPKSVLLASSFEVGSLATMAEPFGGVNYDLVQTLKPFFQRASEAEDRLSRLEDALLSKEDVHNKDHLQTISELQSKLDSANEALIEERKKAN
AKAEMVAAENAKLQYRIIHLVRTARETH