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CcUC04G062110 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G062110
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptiongibberellin 2-beta-dioxygenase 8-like
Genome locationCicolChr04:14681632..14682161
RNA-Seq ExpressionCcUC04G062110
SyntenyCcUC04G062110
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsIPR027443 - Isopenicillin N synthase-like superfamily
IPR044861 - Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454705.1 PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Cucumis melo]4.5e-2575.64Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD  G LQ+MKGSQW+AVKPNP+ALVVN GDLL V T  SF
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

XP_022150034.1 gibberellin 2-beta-dioxygenase 8-like [Momordica charantia]6.3e-2775.9Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFRI
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQDC G LQLMKGS+WVAVKPNPEALVVN GDLL V T   + AF I
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFRI

XP_023522549.1 gibberellin 2-beta-dioxygenase 8-like [Cucurbita pepo subsp. pepo]2.0e-2576.92Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD SG LQLMKGSQWVAVKPNPEALVVN GDLL V +++++
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

XP_023546537.1 gibberellin 2-beta-dioxygenase 8-like [Cucurbita pepo subsp. pepo]2.0e-2576.92Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD SG LQLMKGSQWVAVKPNPEALVVN GDLL V +++++
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

XP_038892146.1 gibberellin 2-beta-dioxygenase 6-like [Benincasa hispida]5.3e-2674.36Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  GEVSGLV  TDSDFLT+LHQDC G LQLMKGSQWVAVKPNPEALVVN GDLL   +++++
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

TrEMBL top hitse value%identityAlignment
A0A1S3C0F9 gibberellin 2-beta-dioxygenase 8-like2.2e-2575.64Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD  G LQ+MKGSQW+AVKPNP+ALVVN GDLL V T  SF
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

A0A5A7UMD3 Gibberellin 2-beta-dioxygenase 8-like1.1e-2475Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSN
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD  G LQ+MKGSQW+AVKPNP+ALVVN GDLL  +T N
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSN

A0A5D3E0D6 Gibberellin 2-beta-dioxygenase 8-like1.1e-2475Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSN
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQD  G LQ+MKGSQW+AVKPNP+ALVVN GDLL  +T N
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSN

A0A6J1D8U5 gibberellin 2-beta-dioxygenase 8-like3.0e-2775.9Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFRI
        D   C LRLNHYPICP  GEVSGLV  TDSDFLTILHQDC G LQLMKGS+WVAVKPNPEALVVN GDLL V T   + AF I
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFRI

A0A6J1FTS8 gibberellin 2-beta-dioxygenase 8-like6.3e-2574.36Show/hide
Query:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        D   C LRLNHYPICP  G+VSGLV  TDSDFLTILHQD SG LQLMKGSQWVAVKPNPEALVVN GDLL   +++++
Subjt:  DSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

SwissProt top hitse value%identityAlignment
O49561 Gibberellin 2-beta-dioxygenase 84.2e-1855.13Show/hide
Query:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDL
        +S  F ++     C LR+N YP CP   EV GL+  TDSDFLTIL+QD  G LQL+K ++W+AVKPNP+AL++N GDL
Subjt:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDL

Q7XP65 Gibberellin 2-beta-dioxygenase 61.5e-1852.27Show/hide
Query:  SSSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF
        S++  F    D   C LRLN YP CP   +  GLV  TDSDFLT+L QD  G L LMK S+WVAV+P P+ALVVN GDL    ++N +
Subjt:  SSSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSF

Q84MB3 1-aminocyclopropane-1-carboxylate oxidase homolog 11.7e-1146.43Show/hide
Query:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA
        K +D    LL L H YP CP      GL   +D+ FLTIL QD  G LQ++    WV V P P ALVVN GDLL + T++ F++
Subjt:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA

Q8LGZ9 Gibberellin 2-beta-dioxygenase 59.7e-1558.82Show/hide
Query:  CLLRLNHYPICPLFGEVSGLVSQTDSDFLTILH--QDCSGELQLMKGSQWVAVKPNPEALVVNSGDLL
        C LRLN YP C +     GL   TDSD LTI+H  QD  G LQL+KG +WVAVKP+P  L+VN GDLL
Subjt:  CLLRLNHYPICPLFGEVSGLVSQTDSDFLTILH--QDCSGELQLMKGSQWVAVKPNPEALVVNSGDLL

Q9C971 Gibberellin 3-beta-dioxygenase 45.9e-1253.73Show/hide
Query:  RCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMK-GSQWVAVKPNPEALVVNSGDL
        R  +RLNHYP+CP      GL + TDS  LTILHQ  +G LQ+ +  S WV V+P P  LVVN GDL
Subjt:  RCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMK-GSQWVAVKPNPEALVVNSGDL

Arabidopsis top hitse value%identityAlignment
AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein1.2e-1246.43Show/hide
Query:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA
        K +D    LL L H YP CP      GL   +D+ FLTIL QD  G LQ++    WV V P P ALVVN GDLL + T++ F++
Subjt:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA

AT1G50960.1 gibberellin 2-oxidase 72.1e-1241.76Show/hide
Query:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFR
        SS +F    + +   LRLN Y       EV GLV  TD+ FLTIL QD  G L+L    QW++VKP  EAL VN GD+    ++  + + R
Subjt:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFR

AT1G80330.1 gibberellin 3-oxidase 44.2e-1353.73Show/hide
Query:  RCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMK-GSQWVAVKPNPEALVVNSGDL
        R  +RLNHYP+CP      GL + TDS  LTILHQ  +G LQ+ +  S WV V+P P  LVVN GDL
Subjt:  RCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMK-GSQWVAVKPNPEALVVNSGDL

AT2G30830.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein6.5e-1446.43Show/hide
Query:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA
        K L+  + L  L+H YP CP      G+ S TD  F+TIL QD  G LQ++    W+ V PNPEAL+VN GDLL + T++ FV+
Subjt:  KHLDSKRCLLRLNH-YPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVA

AT4G21200.1 gibberellin 2-oxidase 83.0e-1955.13Show/hide
Query:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDL
        +S  F ++     C LR+N YP CP   EV GL+  TDSDFLTIL+QD  G LQL+K ++W+AVKPNP+AL++N GDL
Subjt:  SSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTTTCATCAACATCACGCGAGCTTGAAGAGTTTAGCTCTTCTAGGCATTTTCACAAACATTTAGACAGCAAAAGATGCTTACTCCGATTGAATCACTACCCGAT
CTGTCCACTTTTCGGCGAAGTTTCTGGGCTGGTGTCTCAAACAGATAGCGATTTTCTTACCATACTTCATCAAGATTGCAGCGGCGAGCTTCAGCTAATGAAAGGATCAC
AGTGGGTAGCTGTGAAGCCCAACCCAGAAGCCCTTGTTGTCAACAGTGGAGATCTTCTTCTGGTACACACTTCGAACTCTTTCGTTGCGTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTTTCATCAACATCACGCGAGCTTGAAGAGTTTAGCTCTTCTAGGCATTTTCACAAACATTTAGACAGCAAAAGATGCTTACTCCGATTGAATCACTACCCGAT
CTGTCCACTTTTCGGCGAAGTTTCTGGGCTGGTGTCTCAAACAGATAGCGATTTTCTTACCATACTTCATCAAGATTGCAGCGGCGAGCTTCAGCTAATGAAAGGATCAC
AGTGGGTAGCTGTGAAGCCCAACCCAGAAGCCCTTGTTGTCAACAGTGGAGATCTTCTTCTGGTACACACTTCGAACTCTTTCGTTGCGTTCCGAATTTGA
Protein sequenceShow/hide protein sequence
MHFSSTSRELEEFSSSRHFHKHLDSKRCLLRLNHYPICPLFGEVSGLVSQTDSDFLTILHQDCSGELQLMKGSQWVAVKPNPEALVVNSGDLLLVHTSNSFVAFRI