; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G062130 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G062130
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:14722397..14722949
RNA-Seq ExpressionCcUC04G062130
SyntenyCcUC04G062130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043464.1 hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]7.6e-0536.71Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLP
        M ++KL VV +A+  +L CFV+                 +G GLWNC+ PCS T   +SC   C   ++G G C+PK P
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLP

KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]1.8e-0643.75Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN
        M +QKL  VSI ++ IL C VS+ K   +N+              NCV PCS T  D SC   CI+++ GAGFC PKLP+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]5.8e-0552.83Show/hide
Query:  VNMLILGHMAVKGDGL-WNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN
        +N +I G M  KGD L  +CV PCS T  D SC   CI+++ GAGFC PKLP+
Subjt:  VNMLILGHMAVKGDGL-WNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]1.3e-1755.81Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPNISNQKI
        M +QKLF+VS+ V    +CF SS               ++GD LWNCVIPCS  NGDI CNTACI+QD+GAGFCVPKLP IS+ K+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPNISNQKI

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]1.2e-0541.25Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN
        M +QKL  +SI V+ I  C  S+ K   +N+              +CV PCS T  D SC   CIQ++ GAGFC PKLP+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein6.5e-1855.81Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPNISNQKI
        M +QKLF+VS+ V    +CF SS               ++GD LWNCVIPCS  NGDI CNTACI+QD+GAGFCVPKLP IS+ K+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPNISNQKI

A0A0A0LHG9 Uncharacterized protein5.7e-0641.25Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN
        M +QKL  +SI V+ I  C  S+ K   +N+              +CV PCS T  D SC   CIQ++ GAGFC PKLP+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN

A0A0A0LJG5 Uncharacterized protein2.8e-0540Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN
        M +QKL  +SI V+ I  C VS+ K   +N+              +CV PC  T  D SC   CI+++ GAGFC PKLP+
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPN

A0A5A7TJH1 Uncharacterized protein3.7e-0536.71Show/hide
Query:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLP
        M ++KL VV +A+  +L CFV+                 +G GLWNC+ PCS T   +SC   C   ++G G C+PK P
Subjt:  MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTCAGAAGCTTTTTGTCGTCTCCATTGCTGTCATGGCCATACTTACTTGTTTTGTTTCATCAGTTAAAACAAGATTTGTTAATATGTTAATTCTTGGTCACAT
GGCAGTGAAGGGAGATGGTTTGTGGAATTGTGTTATACCATGTTCTACCACTAATGGAGATATTTCATGTAATACTGCATGCATCCAACAAGACCAAGGCGCTGGATTTT
GTGTTCCCAAGTTACCTAACATTTCTAATCAAAAGATAAAACCAACTCTCGAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCTCAGAAGCTTTTTGTCGTCTCCATTGCTGTCATGGCCATACTTACTTGTTTTGTTTCATCAGTTAAAACAAGATTTGTTAATATGTTAATTCTTGGTCACAT
GGCAGTGAAGGGAGATGGTTTGTGGAATTGTGTTATACCATGTTCTACCACTAATGGAGATATTTCATGTAATACTGCATGCATCCAACAAGACCAAGGCGCTGGATTTT
GTGTTCCCAAGTTACCTAACATTTCTAATCAAAAGATAAAACCAACTCTCGAGTGGTGA
Protein sequenceShow/hide protein sequence
MGSQKLFVVSIAVMAILTCFVSSVKTRFVNMLILGHMAVKGDGLWNCVIPCSTTNGDISCNTACIQQDQGAGFCVPKLPNISNQKIKPTLEW