CuGenDBv2

Gene ID	CcUC04G062460
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DNA/RNA polymerases superfamily protein
Genome location	CicolChr04:15675695..15677316
RNA-Seq Expression	CcUC04G062460
Synteny	CcUC04G062460
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050146.1 putative mitochondrial protein [Cucumis melo var. makuwa]

2.4e-16

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

TYJ96936.1 putative mitochondrial protein [Cucumis melo var. makuwa]

9.2e-16

62.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        IS+LG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

TYK06402.1 putative mitochondrial protein [Cucumis melo var. makuwa]

2.4e-16

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia]

7.0e-16

66.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+I++ P  IF+N A+YL DLL  SGM +AKSC TPMST+IDLHASTP+F +A+LY +LV SL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

XP_022158642.1 uncharacterized protein LOC111025097 [Momordica charantia]

9.2e-16

66.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISD G L YFLGL+I+  P GIF+N AKYL DLL  SGM  AKSC TPMST+IDLHAS P+F +A+ Y +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U7J4 Putative mitochondrial protein

1.2e-16

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

A0A5D3BD76 Putative mitochondrial protein

4.4e-16

62.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        IS+LG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

A0A5D3C579 Putative mitochondrial protein

1.2e-16

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+IQ++ +GIF+N AKYL+DLL TSGM++AKSC+TPMST++DL+   P F + +LY +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

A0A6J1DXR3 uncharacterized protein LOC111025097

4.4e-16

66.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISD G L YFLGL+I+  P GIF+N AKYL DLL  SGM  AKSC TPMST+IDLHAS P+F +A+ Y +LVGSL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

A0A6J1DYN6 uncharacterized protein LOC111024722

3.4e-16

66.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        ISDLG L YFLGL+I++ P  IF+N A+YL DLL  SGM +AKSC TPMST+IDLHASTP+F +A+LY +LV SL
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

SwissProt top hits

e value

%identity

Alignment

P92519 Uncharacterized mitochondrial protein AtMg00810

6.2e-07

34.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        + DLG + YFLG+ I+T+P G+F++  KY   +L  +GM   K   TP+   ++   ST  +P+ + +  +VG+L
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00810.1 DNA/RNA polymerases superfamily protein

4.4e-08

34.67

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Query:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL
        + DLG + YFLG+ I+T+P G+F++  KY   +L  +GM   K   TP+   ++   ST  +P+ + +  +VG+L
Subjt:  ISDLGRL-YFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWKLVGSL

Sequences

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CDS sequence

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ATGGCCAATTATAGGAAACTGTTTACATGCCTCAGCTTGTTGGCTTTGTTCACAAAACTTGCCCACATCTTGTTTGTTTGCTCTACAAAAATCTACATGGACTTAAACAA
GCACTACAACTTGATTTCTGACCTTGGACGACTTTACTTCCTCGGGCTTGATATACAGACGAACCCTGAAGGTATTTTTATGAACCACGCTAAGTATCTTCATGATCTCC
TTCAAACCTCTGGCATGTCAGCTGCTAAGTCTTGCCTTACACCCATGTCCACAACAATTGACCTTCATGCTTCGACTCCGTTATTTCCTAATGCTACTTTATATTGGAAG
CTTGTGGGATCGTTATAG

mRNA sequence

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CCTGAACAAAATGGTGTTGCTGAATGTAAGCATCAGCACATCGTCGAAACAGCAATGTCCTTAATCAGTCATTCCTCTGTTCCCCTTGAATTTTGGCCCAATACTTTCTT
TAGGGCTGTCTTTCTTCCTCAATCCTTACCTATTTCCACAACTTCCCCTTCCATTTTGACTACTACAATTTAAACCAGAGAATCTTTACCACATGTCTCTAAGTTTAATA
TGTAGGTATTTCCCACAGACGTTAAACCCACAATGGTTGTTTCCCCTCCATTATCGTCATCACTACCTTCAACCAATACTACTTTCCCCTCCATTATTAGCCCTATCCTT
GTCTCCCAACCCTCCCCTCTGCCTCCAACCAATGTCCATACCCTGCAAACCTGATCCAAATCTGGAATCTTTAAGCCAATAAACTTGACCTTTCATGCCTACACCTCTAC
TTCAACTAACTATGTATCTTATACTGAGGCCTCCAAGTTTCCACACTGGCGTTCTACTATGGCCTCAGAGTTTAATGCGCTTCAAGAGGAAGGCACTTGGTCTCTAGTCC
CCAGGTCACCTGATATAAATGTGGTTGGATGCAAGTGGGTGTTTCGCACCAAATATAATGTTGATGGATCTATTGATGAATACAAAGCTCATCTTGTAGCTAAAGGATGT
TATCAGATTGAAGTTTCAACTTCTCAGAAATGTTTAGTCTGGTAATTAAAAAGCCTACCATTCGGGTATTCTTAATCTTGTTGCACAGTTCACATGACCCTTACATCAGA
TGGATGTAAGAAATGCCTTCTTAGATGGCCAATTATAGGAAACTGTTTACATGCCTCAGCTTGTTGGCTTTGTTCACAAAACTTGCCCACATCTTGTTTGTTTGCTCTAC
AAAAATCTACATGGACTTAAACAAGCACTACAACTTGATTTCTGACCTTGGACGACTTTACTTCCTCGGGCTTGATATACAGACGAACCCTGAAGGTATTTTTATGAACC
ACGCTAAGTATCTTCATGATCTCCTTCAAACCTCTGGCATGTCAGCTGCTAAGTCTTGCCTTACACCCATGTCCACAACAATTGACCTTCATGCTTCGACTCCGTTATTT
CCTAATGCTACTTTATATTGGAAGCTTGTGGGATCGTTATAGTATCTCACATTTACTCGCTTGATATTGTCTTTGCTGTCAATCATGTCAATCAGTTCATGCCGCACCCC
ACAATCAATCACTACACTACTGTAAAACAAATCTTTCGTTATCTCATTGGCATATTGAATCTTGGTTTTTAGTTCAAACCCGACAAGCTTTCTCTTCAGGCCTTATGTGA
CGTTGACTGCGCTAGCAATTCCTTTGATCGTCGGTCAACAATGGGTATGTTGTCCTCCTTGGCTCCTCACCTGTCT

Protein sequence

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MANYRKLFTCLSLLALFTKLAHILFVCSTKIYMDLNKHYNLISDLGRLYFLGLDIQTNPEGIFMNHAKYLHDLLQTSGMSAAKSCLTPMSTTIDLHASTPLFPNATLYWK
LVGSL

CcUC04G062460 (gene) of Watermelon (PI 537277) v1 genome