; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G062910 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G062910
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:18087622..18090305
RNA-Seq ExpressionCcUC04G062910
SyntenyCcUC04G062910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER46571.1 hypothetical protein STAS_23618 [Striga asiatica]4.7e-0667.44Show/hide
Query:  IVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSLC-RNFSLILLLLSSKASSSSSSASKPSCLRVSSSMVETISAWRIRR
        + +P  SSSESVSYSDSSSSSSS +SSSSS  ++ASS  LC R+FS IL L SS+ SSSSSS S PS   VSSS V+TISA RIRR
Subjt:  IVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSLC-RNFSLILLLLSSKASSSSSSASKPSCLRVSSSMVETISAWRIRR

PON38502.1 hypothetical protein PanWU01x14_312320 [Parasponia andersonii]7.4e-4479.65Show/hide
Query:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR
        G  FGFFLSHSLLSSSV+FLTFSISS SFNIASRSSLSLLILAISLTFQASYSSASLISSSVS SAIFAS SK F ISSSF ISSTT+C VS FLSSN  
Subjt:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR

Query:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL
        F +SSR  SS+S RSRSA VSLSD GT  GF+I IP+ SSSESVSYSDSSSSSSS SSSSS     ASS SL
Subjt:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL

PON78704.1 hypothetical protein TorRG33x02_237480 [Trema orientale]2.6e-4480.23Show/hide
Query:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR
        GA FGFFLSHSLLSSSV+FLTFSISS SFNIASRSSLSLLILAISLTFQASYSSASLISSSVS SAIFAS SK F ISSSF ISSTT+C VS FLSSN  
Subjt:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR

Query:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL
        F +SSR  SS+S RSRSA VSLSD GT  GF+I IP+ SSSESVSYSDSSSSSSS SSSSS     ASS SL
Subjt:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL

TrEMBL top hitse value%identityAlignment
A0A0A9NNV4 Uncharacterized protein1.3e-0961.46Show/hide
Query:  IFASISKFFWISSSFLISSTTMCFVSAFLSSNRRFLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSS
        + AS    F + SSFLISSTT+C VS FL S+    +SS   SSSS RSRSA+VS  DFG N GFT+ +P+ SSSESVSYSDSS SSSS + SSSS
Subjt:  IFASISKFFWISSSFLISSTTMCFVSAFLSSNRRFLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSS

A0A2P5APP5 Uncharacterized protein3.6e-4479.65Show/hide
Query:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR
        G  FGFFLSHSLLSSSV+FLTFSISS SFNIASRSSLSLLILAISLTFQASYSSASLISSSVS SAIFAS SK F ISSSF ISSTT+C VS FLSSN  
Subjt:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR

Query:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL
        F +SSR  SS+S RSRSA VSLSD GT  GF+I IP+ SSSESVSYSDSSSSSSS SSSSS     ASS SL
Subjt:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL

A0A2P5DZG8 Uncharacterized protein1.2e-4480.23Show/hide
Query:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR
        GA FGFFLSHSLLSSSV+FLTFSISS SFNIASRSSLSLLILAISLTFQASYSSASLISSSVS SAIFAS SK F ISSSF ISSTT+C VS FLSSN  
Subjt:  GAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTMCFVSAFLSSNRR

Query:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL
        F +SSR  SS+S RSRSA VSLSD GT  GF+I IP+ SSSESVSYSDSSSSSSS SSSSS     ASS SL
Subjt:  FLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSL

A0A5A7QRM1 Uncharacterized protein2.3e-0667.44Show/hide
Query:  IVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSLC-RNFSLILLLLSSKASSSSSSASKPSCLRVSSSMVETISAWRIRR
        + +P  SSSESVSYSDSSSSSSS +SSSSS  ++ASS  LC R+FS IL L SS+ SSSSSS S PS   VSSS V+TISA RIRR
Subjt:  IVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSLC-RNFSLILLLLSSKASSSSSSASKPSCLRVSSSMVETISAWRIRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATGATATATAAACAAACTAAAAGTCTCAATCTCAATATCAAGCTCTGGATGCTCAGTGGTGGAGCAGGTTTCGGATTCTTCCTCTCCCACTCTCTCCTCTCTTC
CTCAGTCATATTTCTCACCTTCTCAATCTCCTCCCTCTCCTTCAACATTGCATCTCGGAGTTCTCTATCCCTCTTGATCCTAGCAATCTCCCTAACCTTCCAAGCCTCAT
ATTCTTCTGCTTCATTAATTTCATCATCAGTGTCCACATCTGCAATATTTGCCTCCATTTCCAAATTCTTCTGGATCTCTTCATCCTTTCTAATCTCCTCAACCACAATG
TGCTTTGTCTCTGCCTTCCTTTCCTCCAATCGCCGTTTTCTCAATTCCTCAAGAGACCTTTCCTCCTCTTCAATACGCTCCCGTTCGGCAATAGTTTCTCTCTCTGATTT
CGGAACAAATATTGGCTTCACCATTGTTATCCCAGTAGGTTCATCTTCTGAATCAGTTTCATACTCAGACTCCTCTTCTTCCTCTTCCTCTGGTTCCTCCTCCTCTTCTT
CTTCAGGGAATGCAGCTTCTTCTAGCTCCCTTTGTCGCAACTTTTCCTTGATTCTTCTTCTTCTTTCCTCCAAAGCCTCCTCATCCTCTTCCTCTGCGTCTAAACCCTCC
TGCCTCCGTGTTTCCTCTTCAATGGTTGAAACAATCTCAGCTTGGCGAATACGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATGATATATAAACAAACTAAAAGTCTCAATCTCAATATCAAGCTCTGGATGCTCAGTGGTGGAGCAGGTTTCGGATTCTTCCTCTCCCACTCTCTCCTCTCTTC
CTCAGTCATATTTCTCACCTTCTCAATCTCCTCCCTCTCCTTCAACATTGCATCTCGGAGTTCTCTATCCCTCTTGATCCTAGCAATCTCCCTAACCTTCCAAGCCTCAT
ATTCTTCTGCTTCATTAATTTCATCATCAGTGTCCACATCTGCAATATTTGCCTCCATTTCCAAATTCTTCTGGATCTCTTCATCCTTTCTAATCTCCTCAACCACAATG
TGCTTTGTCTCTGCCTTCCTTTCCTCCAATCGCCGTTTTCTCAATTCCTCAAGAGACCTTTCCTCCTCTTCAATACGCTCCCGTTCGGCAATAGTTTCTCTCTCTGATTT
CGGAACAAATATTGGCTTCACCATTGTTATCCCAGTAGGTTCATCTTCTGAATCAGTTTCATACTCAGACTCCTCTTCTTCCTCTTCCTCTGGTTCCTCCTCCTCTTCTT
CTTCAGGGAATGCAGCTTCTTCTAGCTCCCTTTGTCGCAACTTTTCCTTGATTCTTCTTCTTCTTTCCTCCAAAGCCTCCTCATCCTCTTCCTCTGCGTCTAAACCCTCC
TGCCTCCGTGTTTCCTCTTCAATGGTTGAAACAATCTCAGCTTGGCGAATACGTCGATGA
Protein sequenceShow/hide protein sequence
MQMIYKQTKSLNLNIKLWMLSGGAGFGFFLSHSLLSSSVIFLTFSISSLSFNIASRSSLSLLILAISLTFQASYSSASLISSSVSTSAIFASISKFFWISSSFLISSTTM
CFVSAFLSSNRRFLNSSRDLSSSSIRSRSAIVSLSDFGTNIGFTIVIPVGSSSESVSYSDSSSSSSSGSSSSSSSGNAASSSSLCRNFSLILLLLSSKASSSSSSASKPS
CLRVSSSMVETISAWRIRR