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CcUC04G063630 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G063630
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionHeat shock protein DnaJ with tetratricopeptide repeat
Genome locationCicolChr04:19763040..19763327
RNA-Seq ExpressionCcUC04G063630
SyntenyCcUC04G063630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046686.1 Heat shock protein DnaJ with tetratricopeptide repeat isoform 1 [Cucumis melo var. makuwa]9.3e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

XP_004135998.2 uncharacterized protein LOC101222380 [Cucumis sativus]9.3e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

XP_008451491.1 PREDICTED: uncharacterized protein LOC103492765 [Cucumis melo]9.3e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

XP_022953408.1 uncharacterized protein LOC111455971 [Cucurbita moschata]7.9e-1367.9Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSES
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES

XP_038899800.1 uncharacterized protein LOC120087026 [Benincasa hispida]3.2e-1465.12Show/hide
Query:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        ++ +RE+ A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DSAGS GSSQQL K RVKLLGSSESP
Subjt:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

TrEMBL top hitse value%identityAlignment
A0A0A0KB72 Uncharacterized protein4.5e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

A0A1S3BRM9 uncharacterized protein LOC1034927654.5e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

A0A5D3D2R9 Heat shock protein DnaJ with tetratricopeptide repeat isoform 14.5e-1468.29Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSESP
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESP

A0A6J1GN95 uncharacterized protein LOC1114559713.8e-1367.9Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSES
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES

A0A6J1JVR8 uncharacterized protein LOC1114883073.8e-1367.9Show/hide
Query:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES
        REV A LNLI+A LA SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+GSSQQL K RVKLLGSSES
Subjt:  REVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47440.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-0640.22Show/hide
Query:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESPRRWENF
        S    +V + L+L++A L+ SPR    LELKA + L+LR  K VA+MLQD   S K+    SA S GSS       + LL  + SP  ++ F
Subjt:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESPRRWENF

AT3G62570.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.9e-0538.1Show/hide
Query:  RPRCNSRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGS--------NGSSQQLFKHRVKLLGSSESPR
        R    S  + +V + ++L++A L+ SPR    LELKA + L+LR  K V +MLQD   S K+   +  GS        + SS QL +   KLL S  SPR
Subjt:  RPRCNSRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGS--------NGSSQQLFKHRVKLLGSSESPR

Query:  RWENF
        R  +F
Subjt:  RWENF

AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat6.9e-0742.7Show/hide
Query:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKH----RVKLLGSSES
        S+   +V + LNL+ + L+ SPR    LELKA + LYLR  K VA+MLQD   S K+  G      GSS+  F H     VKLL    S
Subjt:  SRTKREVYATLNLINAVLAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIHGDSAGSNGSSQQLFKH----RVKLLGSSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACGCCCTCGTTGCAACTCAAGAACAAAGAGAGAAGTTTATGCCACTCTTAATCTTATTAATGCGGTTTTGGCTCCTTCTCCTCGACTTGAACTCAAAGCTCA
TGCTTTCCTTTATCTTCGCCACTTGAAAGTTGTTGCCAATATGCTTCAGGATTTATTCAGTTTCAAGATCATCCATGGGGATTCTGCTGGCTCCAATGGGTCCTCACAAC
AACTCTTCAAACACCGAGTTAAGCTTCTTGGATCGTCTGAGTCACCTCGTCGTTGGGAAAACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACGCCCTCGTTGCAACTCAAGAACAAAGAGAGAAGTTTATGCCACTCTTAATCTTATTAATGCGGTTTTGGCTCCTTCTCCTCGACTTGAACTCAAAGCTCA
TGCTTTCCTTTATCTTCGCCACTTGAAAGTTGTTGCCAATATGCTTCAGGATTTATTCAGTTTCAAGATCATCCATGGGGATTCTGCTGGCTCCAATGGGTCCTCACAAC
AACTCTTCAAACACCGAGTTAAGCTTCTTGGATCGTCTGAGTCACCTCGTCGTTGGGAAAACTTTTAG
Protein sequenceShow/hide protein sequence
MQERPRCNSRTKREVYATLNLINAVLAPSPRLELKAHAFLYLRHLKVVANMLQDLFSFKIIHGDSAGSNGSSQQLFKHRVKLLGSSESPRRWENF