; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G063860 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G063860
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationCicolChr04:20168304..20174638
RNA-Seq ExpressionCcUC04G063860
SyntenyCcUC04G063860
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.0e-12991.14Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        +QSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]4.5e-13091.51Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]8.5e-12990.77Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  ED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

XP_038881170.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]2.1e-12787.15Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVP
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTFRDPKALEIALLL                 SGATIVDQIVSIS AENHVP
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLL-----------------SGATIVDQIVSISPAENHVP

Query:  RKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMS
        R+EMQEVR VDNAACLTPTENNFP  ED ASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+S
Subjt:  RKEMQEVRAVDNAACLTPTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMS

Query:  VVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        VVNEKVKS+DQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLA+S LTSKE  VVA
Subjt:  VVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.2e-13092.62Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AENHVPR+EMQEVR VDNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENNFP  ED ASQPSSGKMYVNRAQ VVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQNLHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTAG AWLNGAFGKVAKAGQAAGTKTREKFHLA+S LTSKE  VVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein2.2e-13091.51Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+EMQEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P IED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

A0A1S3CIA3 binding partner of ACD11 1-like4.1e-12990.77Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  ED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

A0A5D3BPG7 Binding partner of ACD11 1-like4.1e-12990.77Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQVKHVSDLAT+R IHEFFSFSGEIEHIEIQCEQG SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAENHVPR+E+QEVR  DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENN P  ED ASQPSSGKMYVNRAQEVVATVLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD+RVGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERKLNDTGSAVKTSKYVTA  AWLNGAFGKVAKAGQAAGTKTREKFHLA+S L SKEPPVVA
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

A0A6J1GFF4 binding partner of ACD11 13.0e-12789.3Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQ ++VSDLAT+R IHEFFSFSGEIEH+EIQCEQG SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPR+EMQEVRAVDNAA LT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENNFP IED ASQPSSG+MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKVAKAGQAAGTKTREKFHLA+S LTSK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

A0A6J1IKN1 binding partner of ACD11 13.0e-12789.3Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        MQSQTRTVQ ++VSDLAT+R IHEFFSFSGEIEH+EIQCEQG SKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAEN+VPR+EMQEVRAVDNAA LT
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
        PTENNFP IED ASQPSSG+MYVNRAQEVVA+VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSFD++VGLTEKLTVG+SVVNEKVKS+DQ LHVSD
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA
        KTMAAIFAAERK+NDTGSAVKTSKYVT+G AWLNGAFGKVAKAGQAAGTKTREKFHLA+S LTSK  PV A
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 17.7e-4842.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P      +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.0e-5245.24Show/hide
Query:  TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNF
        TV+V +VS  AT R + EFFSFSG+I ++E Q E   +K A+VTF+D +  E A+LLSGATIVD  V +S A ++    E          A L P ++N 
Subjt:  TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNF

Query:  PCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAI
                 P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFDK++G T+K+  G  VV EKV+ +DQ   VS+KT +AI
Subjt:  PCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV  G  W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 15.4e-4942.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P      +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 14.2e-4942.91Show/hide
Query:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT
        M SQ R+V+V ++S  AT+  I EFFSFSGE+E I+IQ       +A+VTF++ +  E A+LLSGA+I DQ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLT

Query:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD
              P      +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K++DQN  V++
Subjt:  PTENNFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein2.0e-9670.19Show/hide
Query:  TRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTEN
        TR+VQV +VSDLAT+R IHEFFSFSG+IEHIEIQ E G S+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AEN+V R+E QEVR +DNA  L   E+
Subjt:  TRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTEN

Query:  NFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMA
             +   +   + + YV++AQ+VVATVLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFDKRVGLTEKL+VG+S VNEKVKS+DQ L VSDKTMA
Subjt:  NFPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPV
        AIFAAERKLNDTGSAVK+S+YVTAG AW +GAF KVA+ GQ AG+KT+EKF+LA+S ++SK+ P+
Subjt:  AIFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPV

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-5142.29Show/hide
Query:  TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRKEMQEVRAVDNAACLTPTENN
        TV+V +VS  AT+R + EFFSFSG+I ++E Q E  GSK A+VTF+D +  E A+LL+G+TIVD  V+++ + ++ +P   +  + ++  +      +++
Subjt:  TVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENH-VPRKEMQEVRAVDNAACLTPTENN

Query:  FPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAA
         P  ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFDKR+G TEK+  G +VV+EKVK +DQ   V++KT +A
Subjt:  FPCIEDFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAA

Query:  IFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA
        I AAE+ +++ GSA+  ++YV  G  W+ GAF +V+KA +  G K +EK  LA
Subjt:  IFAAERKLNDTGSAVKTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGTGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCACATAGAGAT
TCAATGTGAACAAGGGGGATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGA
GCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCATGTCTCACTCCTACAGAGAATAATTTTCCTTGTATTGAG
GATTTTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGATGCCATGAACAA
GGCAAAAGCATTCGACGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATGTCAG
TGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTC
AAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAGTTCCATTT
GGCTATCTCAGGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
TTTCTATCAATAGAGTTTAGATAAAAATGACTTTTTAGAAAAATAATTTTTTCTCTATTCAATTCAAATAGATCCTAAAATTGAACATTTGAAAGTATAAGGACCAAAAT
CGAATAAACTCAAAAGTATAGAGACCAAAATGATATTTTAACATTTGTTTATAACTTTTTTTAAAAAATATTCATTTACATCTGCATTTTATCCACGACGTTTTCCTCGC
CACATTAAGAAAAAAAAATAATAATGAAAATGAAAATGAAAGGGGGCAAATTTGGAAAGTGAAATTTCCTGACATACTAATTTCCTTGATTTTTATCTGTCTCACGCTTT
GTCTGGCGATACTTCTTTCAAATTGCCTCCAAGCTCCAACTTGTACAACTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAGAAATTCGCCAAATTCTT
CGATAATTAGCAATGCAGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTAAGAGGGTGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGA
GCACATAGAGATTCAATGTGAACAAGGGGGATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAG
ATCAGATTGTGAGCATATCTCCCGCTGAAAATCATGTACCAAGAAAAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCATGTCTCACTCCTACAGAGAATAATTTT
CCTTGTATTGAGGATTTTGCAAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTTGCTAAAGGTTCAACAATTGGACAAGA
TGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACTGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAAAAGGGTTGGGCTCACAGAGAAATTGACAG
TTGGGATGTCAGTGGTTAACGAGAAAGTCAAGTCTATCGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACA
GGATCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGTACTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGA
GAAGTTCCATTTGGCTATCTCAGGCTTAACTTCAAAGGAACCCCCAGTTGTTGCCTAACCTTAAAACTTAGGCTTCAAGAAAGTCACTTGCCTTGGCTACTTGTATTTTC
AGTGGGGGATTGAAATGAGTTTCTTCAATTCTATTTCTTCAGGTTATTTCTTTTTCTTGAGGACGGTGCTCTATTATTATTATTTATTATTATTATTAGTATCATTTTTT
ATATTGTTCATATTCTTTAATTACAAGGGGGTTTGGCTGATGTCAATTATGTATTTGTAAGATTGGTTATGGAAGTGTAAAGAAAATCCAATTATGGTTTGTCTTATACT
CTTAATTATTTTTTTAGGAGTATATCAAAGTTTGTGGCTCAGCTTGCTTCTTGCTGTCA
Protein sequenceShow/hide protein sequence
MQSQTRTVQVKHVSDLATKRVIHEFFSFSGEIEHIEIQCEQGGSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRKEMQEVRAVDNAACLTPTENNFPCIE
DFASQPSSGKMYVNRAQEVVATVLAKGSTIGQDAMNKAKAFDEKHRLTASASAKVLSFDKRVGLTEKLTVGMSVVNEKVKSIDQNLHVSDKTMAAIFAAERKLNDTGSAV
KTSKYVTAGTAWLNGAFGKVAKAGQAAGTKTREKFHLAISGLTSKEPPVVA