; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G064560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G064560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTetratricopetide-repeat thioredoxin-like 3
Genome locationCicolChr04:21189407..21201118
RNA-Seq ExpressionCcUC04G064560
SyntenyCcUC04G064560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT97598.1 hypothetical protein VIGAN_09109300 [Vigna angularis var. angularis]2.5e-1666.27Show/hide
Query:  APPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI
        +PP  S PAAHRR ILNS AAFRRPL +P  + SQ+ LS P   A+S T SDPP RH+VTS AAALSLALS+PSL TAP+ LI
Subjt:  APPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI

GER55734.1 tetratricopetide-repeat thioredoxin-like 3 [Striga asiatica]2.7e-0750.62Show/hide
Query:  ESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNT
        E P +    + PAAH  +IL S  AFR    +P+ I SQ TLSIPA  A+S T SDPP R  +T+ AAALS A S+PSL++
Subjt:  ESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNT

OIW19051.1 hypothetical protein TanjilG_10612 [Lupinus angustifolius]3.0e-1455.79Show/hide
Query:  ILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI
        ++DE+ V  + P+  + SKPA H R I+N  AAF  PL + + I S MTLS P I  +S  IS+PP RHIVTS   ALSLALSEPSLNT PNF I
Subjt:  ILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI

RDX97306.1 hypothetical protein CR513_19924, partial [Mucuna pruriens]5.7e-2161.06Show/hide
Query:  TVAPLDELTM--VVESPPILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLAL
        T+  + E TM  VVE+P         +SPP     S PAAHRR ILNS AAFRRPL +P  + SQ+TLS P I A+S TISDPP RHIVTS AAALSLAL
Subjt:  TVAPLDELTM--VVESPPILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLAL

Query:  SEPSLNTAPNFLI
        S+PSLNTAPN L+
Subjt:  SEPSLNTAPNFLI

TrEMBL top hitse value%identityAlignment
A0A0S3SXK5 Uncharacterized protein1.2e-1666.27Show/hide
Query:  APPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI
        +PP  S PAAHRR ILNS AAFRRPL +P  + SQ+ LS P   A+S T SDPP RH+VTS AAALSLALS+PSL TAP+ LI
Subjt:  APPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI

A0A371H3P6 Uncharacterized protein (Fragment)2.7e-2161.06Show/hide
Query:  TVAPLDELTM--VVESPPILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLAL
        T+  + E TM  VVE+P         +SPP     S PAAHRR ILNS AAFRRPL +P  + SQ+TLS P I A+S TISDPP RHIVTS AAALSLAL
Subjt:  TVAPLDELTM--VVESPPILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLAL

Query:  SEPSLNTAPNFLI
        S+PSLNTAPN L+
Subjt:  SEPSLNTAPNFLI

A0A444DBT4 Uncharacterized protein (Fragment)8.9e-0454.1Show/hide
Query:  SKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAAL
        S   AHRR I  S AAFR    VP PI SQ+T SIP + A+S T  D   RH  T AAAAL
Subjt:  SKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAAL

A0A4P1RW01 Uncharacterized protein1.5e-1455.79Show/hide
Query:  ILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI
        ++DE+ V  + P+  + SKPA H R I+N  AAF  PL + + I S MTLS P I  +S  IS+PP RHIVTS   ALSLALSEPSLNT PNF I
Subjt:  ILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNTAPNFLI

A0A5A7RF07 Tetratricopetide-repeat thioredoxin-like 31.3e-0750.62Show/hide
Query:  ESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNT
        E P +    + PAAH  +IL S  AFR    +P+ I SQ TLSIPA  A+S T SDPP R  +T+ AAALS A S+PSL++
Subjt:  ESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATCTATGCACAGTTGCTCCTCTTGACGAACTAACAATGGTGGTTGAATCGCCGCCAATTCTCGACGAAGTAACCGTTAAGGAATCTCCTCCGGCACCACCTAT
TACATCCAAACCCGCCGCCCATCGCCGGAGTATTCTCAACAGCGACGCTGCCTTCCGCCGCCCTCTAATTGTCCCACTCCCCATCTGTTCCCAAATGACTCTCTCAATCC
CGGCCATCGACGCCAACTCCGTCACCATCTCCGACCCACCTTGCCGGCACATTGTCACCAGCGCCGCGGCGGCGCTTTCTCTGGCCCTATCGGAGCCTTCTCTCAACACC
GCCCCCAATTTCTTAATCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATCTATGCACAGTTGCTCCTCTTGACGAACTAACAATGGTGGTTGAATCGCCGCCAATTCTCGACGAAGTAACCGTTAAGGAATCTCCTCCGGCACCACCTAT
TACATCCAAACCCGCCGCCCATCGCCGGAGTATTCTCAACAGCGACGCTGCCTTCCGCCGCCCTCTAATTGTCCCACTCCCCATCTGTTCCCAAATGACTCTCTCAATCC
CGGCCATCGACGCCAACTCCGTCACCATCTCCGACCCACCTTGCCGGCACATTGTCACCAGCGCCGCGGCGGCGCTTTCTCTGGCCCTATCGGAGCCTTCTCTCAACACC
GCCCCCAATTTCTTAATCAGATAA
Protein sequenceShow/hide protein sequence
MKNLCTVAPLDELTMVVESPPILDEVTVKESPPAPPITSKPAAHRRSILNSDAAFRRPLIVPLPICSQMTLSIPAIDANSVTISDPPCRHIVTSAAAALSLALSEPSLNT
APNFLIR