; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G065560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G065560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationCicolChr04:22548198..22552396
RNA-Seq ExpressionCcUC04G065560
SyntenyCcUC04G065560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6074.7Show/hide
Query:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        ALETAG DLE+  +       AE     GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V 
Subjt:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        HE EQ EQ+H  NNGT+ST TVAA VAA+P GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6074.7Show/hide
Query:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        ALETAG DLE+            RG+  GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V 
Subjt:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        HE EQ EQ+H  NNGT+ST TVAA VAA+P GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]2.8e-5669.46Show/hide
Query:  ALETAG-ADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        A++T G ADLE+              SG    +   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ 
Subjt:  ALETAG-ADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        AHE E  EQ+  SNN TVST TVA  V   P GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  AHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-5974.1Show/hide
Query:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        ALETAG DLE+  +       AE     GEVKV  ERDCRICHLGLESNSSE G  IELGC CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV   
Subjt:  ALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        HE EQ EQ+H  NNGT+ST TVAA V AAP GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]1.9e-7386.31Show/hide
Query:  ALETAGADLEKEWQRAAAAATAERGSGVG-EVKV-KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM
        ALETAGADLEK W++ A    AERGSGVG EVKV  LERDCRICHLGL SNS+EFGVGIELGCCCKNDL  AHKHCAEAWFKIRGNKTCEICHSIVRNVM
Subjt:  ALETAGADLEKEWQRAAAAATAERGSGVG-EVKV-KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM

Query:  VAHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        V  E EQTEQ+H SNNGTVSTATVAA VAA P GGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  VAHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

TrEMBL top hitse value%identityAlignment
A0A0D2RY71 RING-CH-type domain-containing protein1.2e-4971.53Show/hide
Query:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A L AA+    RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A5D2JJR0 RING-CH-type domain-containing protein1.2e-4971.53Show/hide
Query:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A L AA+    RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A5J5QA21 RING-CH-type domain-containing protein1.2e-4971.53Show/hide
Query:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A L AA+    RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1DBE4 uncharacterized protein LOC1110194411.3e-5669.46Show/hide
Query:  ALETAG-ADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        A++T G ADLE+              SG    +   ERDCRICHLGLES+S E G+GIELGC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ 
Subjt:  ALETAG-ADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

Query:  AHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        AHE E  EQ+  SNN TVST TVA  V   P GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  AHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A7J9JAB8 RING-CH-type domain-containing protein1.2e-4971.53Show/hide
Query:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV
        SG  E+K+   K+E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIRGNKTCEICHSI RNV+  +E E TEQ + +N+   STAT 
Subjt:  SGVGEVKV---KLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATV

Query:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
        A L AA+    RSFWH HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  AALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein1.3e-1651.85Show/hide
Query:  SGVGEVKVKLERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV
        SGVG      ER CRICH G + +    G         IE+GC CKN+LG AH HCAEAWFK+RGN  CEIC    +NV V
Subjt:  SGVGEVKVKLERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMV

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein4.3e-3149.29Show/hide
Query:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV-----MVAHEFEQTEQVHGSNNGTVSTATVAALVAAAP
        E+DCRICHLG+E++    G  IELGC CK+DL  AH+ CAE WFKI+G+KTCEIC S+ RNV     MV    E+ E  +G               AA  
Subjt:  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNV-----MVAHEFEQTEQVHGSNNGTVSTATVAALVAAAP

Query:  GGGRSF----WHVHRVLNFLLACMVFAFVISWLFHFNVPS
        GGG +     W   RV+N +LACMVF F ISW+FHF+V S
Subjt:  GGGRSF----WHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein2.1e-3348.75Show/hide
Query:  DLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHEFEQT
        DL+ E    + A+ + RGS         E+DCRICHLGLES+  E G  + LGC CK+DLG  HK CA+ WFKI+GNKTCEIC SI +N   V +E  QT
Subjt:  DLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVM-VAHEFEQT

Query:  EQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
             +N   V       +VA +    R     +R LNFLL CMV AFVISW FHFN+PS
Subjt:  EQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein1.9e-3952.73Show/hide
Query:  DLEKEWQRAAAAATAERGSGVGEVKVKL---ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFE
        D E+    +  +   +   G+ E  V L   ERDCRICH+ L++ + E GV IELGC CK DL AAHKHCAE WFKI+GNK CE+C SI  NV+ + E E
Subjt:  DLEKEWQRAAAAATAERGSGVGEVKVKL---ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFE

Query:  QTE---QVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS
          E   + +G  N T+ T+    +       GRSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  QTE---QVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein4.2e-2640.48Show/hide
Query:  KVKLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA
        K K  RDCRICHL LE+N                                  +G+ ++LGC CK DLG AH  CAE WFKI+GN TCEIC ++  NV   
Subjt:  KVKLERDCRICHLGLESNSSE-------------------------------FGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVA

Query:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPG----GGRSFWHVHRVLNFLLACMVFAFVISWLFHFNV
                  G  +   STA+  +  AA         R  WH   V+NFLLA MVFAFV+SWLFHF V
Subjt:  HEFEQTEQVHGSNNGTVSTATVAALVAAAPG----GGRSFWHVHRVLNFLLACMVFAFVISWLFHFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTCCTGGATTCTCTTTTGATGACTGTACAATGGAAAGCATCAGTAAAGGTTATGGAAATGTTTCTGATGTTTTGTTGAACAAACCCATGAAAGCTAATCCATA
TTTCAACGGTTGTGGAGTGAATAAAGCAACAATTAACATTCGGGTCGTTGAGGGAACCTTGTTGTCTCTTTACAAAGCTTTAGAGACGGCCGGAGCTGATTTGGAGAAAG
AGTGGCAGCGGGCGGCGGCGGCGGCAACGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGGTGAAGTTGGAGAGAGATTGTAGGATTTGCCATTTGGGTTTAGAGAGC
AATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAA
GACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAATTTGAACAAACGGAGCAAGTCCATGGGTCGAACAATGGGACGGTATCAACGGCGACGG
TTGCAGCGTTGGTGGCTGCCGCTCCTGGTGGTGGCCGGAGCTTTTGGCATGTTCACCGAGTCCTTAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGG
CTCTTTCATTTCAATGTGCCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTCCTGGATTCTCTTTTGATGACTGTACAATGGAAAGCATCAGTAAAGGTTATGGAAATGTTTCTGATGTTTTGTTGAACAAACCCATGAAAGCTAATCCATA
TTTCAACGGTTGTGGAGTGAATAAAGCAACAATTAACATTCGGGTCGTTGAGGGAACCTTGTTGTCTCTTTACAAAGCTTTAGAGACGGCCGGAGCTGATTTGGAGAAAG
AGTGGCAGCGGGCGGCGGCGGCGGCAACGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGGTGAAGTTGGAGAGAGATTGTAGGATTTGCCATTTGGGTTTAGAGAGC
AATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAA
GACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAATTTGAACAAACGGAGCAAGTCCATGGGTCGAACAATGGGACGGTATCAACGGCGACGG
TTGCAGCGTTGGTGGCTGCCGCTCCTGGTGGTGGCCGGAGCTTTTGGCATGTTCACCGAGTCCTTAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGG
CTCTTTCATTTCAATGTGCCATCATAA
Protein sequenceShow/hide protein sequence
MSIPGFSFDDCTMESISKGYGNVSDVLLNKPMKANPYFNGCGVNKATINIRVVEGTLLSLYKALETAGADLEKEWQRAAAAATAERGSGVGEVKVKLERDCRICHLGLES
NSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHEFEQTEQVHGSNNGTVSTATVAALVAAAPGGGRSFWHVHRVLNFLLACMVFAFVISW
LFHFNVPS