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CcUC04G065960 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G065960
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDNA polymerase, beta-like region
Genome locationCicolChr04:22957218..22957724
RNA-Seq ExpressionCcUC04G065960
SyntenyCcUC04G065960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KXM9 DNA polymerase, beta-like region3.6e-1442.98Show/hide
Query:  RYPTRSTCPSPSPTRLFTRRRIVRLQQTVKMDIDSTDLTSVHPKRRTILFTNGAATGRQLLKLQRMFAVNHMADVFRELGAKWVGVEVAVLAPVEQPLDG
        RYPT S            RRR VRL+    M+IDST++ +++P+RRTILF N A+   +L + + M AV+ +A++ RELGAKW+ +EVAV+A VE  +DG
Subjt:  RYPTRSTCPSPSPTRLFTRRRIVRLQQTVKMDIDSTDLTSVHPKRRTILFTNGAATGRQLLKLQRMFAVNHMADVFRELGAKWVGVEVAVLAPVEQPLDG

Query:  VPTNV----TNSVDQASAVGL
           ++     + VDQ+ AVG+
Subjt:  VPTNV----TNSVDQASAVGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCCCATACCAAAATTACCGTAATTATTACCGAATTGCCCACCGGAATTATACCCACCATTCCACGGAAACCCACCGCCAGGAAACGGAGGTGGCCCGCC
AGCCCACGGCGGCGGTATCCCACGAGAAGTACTTGTCCCTCTCCCTCCCCCACTCGGTTGTTCACTCGGCGGCGAATCGTACGGCTCCAACAGACAGTCAAGATG
GATATTGACTCTACAGATCTCACATCCGTACACCCAAAGAGAAGAACAATCCTTTTTACAAACGGCGCAGCCACCGGACGGCAGCTTTTGAAGCTTCAAAGGATG
TTTGCTGTCAATCACATGGCAGACGTCTTTAGGGAGTTGGGTGCAAAGTGGGTGGGCGTCGAAGTCGCAGTCCTTGCACCGGTAGAACAGCCCCTCGACGGGGTC
CCGACAAATGTCACAAATTCGGTCGATCAGGCGAGCGCCGTTGGGCTTACGGAGGACAAGAGTGAGGTGGTGGCGGTGGATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCCCATACCAAAATTACCGTAATTATTACCGAATTGCCCACCGGAATTATACCCACCATTCCACGGAAACCCACCGCCAGGAAACGGAGGTGGCCCGCC
AGCCCACGGCGGCGGTATCCCACGAGAAGTACTTGTCCCTCTCCCTCCCCCACTCGGTTGTTCACTCGGCGGCGAATCGTACGGCTCCAACAGACAGTCAAGATG
GATATTGACTCTACAGATCTCACATCCGTACACCCAAAGAGAAGAACAATCCTTTTTACAAACGGCGCAGCCACCGGACGGCAGCTTTTGAAGCTTCAAAGGATG
TTTGCTGTCAATCACATGGCAGACGTCTTTAGGGAGTTGGGTGCAAAGTGGGTGGGCGTCGAAGTCGCAGTCCTTGCACCGGTAGAACAGCCCCTCGACGGGGTC
CCGACAAATGTCACAAATTCGGTCGATCAGGCGAGCGCCGTTGGGCTTACGGAGGACAAGAGTGAGGTGGTGGCGGTGGATGGATGA
Protein sequenceShow/hide protein sequence
MPSHTKITVIITELPTGIIPTIPRKPTARKRRWPASPRRRYPTRSTCPSPSPTRLFTRRRIVRLQQTVKMDIDSTDLTSVHPKRRTILFTNGAATGRQLLKLQRM
FAVNHMADVFRELGAKWVGVEVAVLAPVEQPLDGVPTNVTNSVDQASAVGLTEDKSEVVAVDG