; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G068690 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G068690
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSecoisolariciresinol dehydrogenase
Genome locationCicolChr04:25412963..25416462
RNA-Seq ExpressionCcUC04G068690
SyntenyCcUC04G068690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027179.1 hypothetical protein SDJN02_11190, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-6750.77Show/hide
Query:  AILCEKKPKSSAPMVHGRSCTLDSPTKPSSDKLLKVPPTFTVSGTTCKACPPSTNATVTTYIADYYVFKLPFTVAKTGSFVLCGAAACPPFPRIKAEKCP
        AI C+KKPKSSAPMVHGRSCTLDSP                                               TVA+TGSFVLCGAAACPPFPRIKAEKCP
Subjt:  AILCEKKPKSSAPMVHGRSCTLDSPTKPSSDKLLKVPPTFTVSGTTCKACPPSTNATVTTYIADYYVFKLPFTVAKTGSFVLCGAAACPPFPRIKAEKCP

Query:  APAHTGPGLEAMTPVGKDGCTCNAKIPSMSSRASSSFDKLHYTLLQAGKLASQFPSNNSIFKQTLAILQERNTNILDCILGIEKTIEMYLKRKGIHVCSE
        APAHTGPGLEAMTPV                    + DKLHYTLL AGKL SQFPSNN+I+K+                         YLKRKGIHVCS+
Subjt:  APAHTGPGLEAMTPVGKDGCTCNAKIPSMSSRASSSFDKLHYTLLQAGKLASQFPSNNSIFKQTLAILQERNTNILDCILGIEKTIEMYLKRKGIHVCSE

Query:  TKNRCRGRRNR----------IPSNGSHHSSLGNRPLVTDSKRVELRPHDSGYSWILLLTPFIHSMNSLSLAKPNRFWVSEWSSDPSPPCSVT--DGRHQ
        +KNR R RR R           P NGSHHSSLGNRPLVTD+++VELRPH+                NS SLAKP+ F VSE SS+PSPPCS +  DGRH 
Subjt:  TKNRCRGRRNR----------IPSNGSHHSSLGNRPLVTDSKRVELRPHDSGYSWILLLTPFIHSMNSLSLAKPNRFWVSEWSSDPSPPCSVT--DGRHQ

Query:  AIPNTSIQQNDWKL--KPPPLISKT
        A P TSIQQN+      PPP ISKT
Subjt:  AIPNTSIQQNDWKL--KPPPLISKT
TrEMBL top hitse value%identityAlignment
A0A2R6QVW5 Secoisolariciresinol dehydrogenase9.4e-0456.14Show/hide
Query:  SFVLCGAAACPPFPRIKAEKCPAPAHTGPGLEAMTPVGKDGCTCNAKIPSMSSRASS
        S V C  A CPPFPRI A   P PA  G GLE M PVGK G  CN K+    SRA S
Subjt:  SFVLCGAAACPPFPRIKAEKCPAPAHTGPGLEAMTPVGKDGCTCNAKIPSMSSRASS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCATGGCCACAGCAGCGTGAAGAGCTGCTCCTATTGGAAGGGCTTCTTCATCAAGGACAAAGTGCGGTGAGTGCACTGGCCGATTTGATCCCAGAGTCT
CATTCCCTGTCCCAATCACCTGCAATCCTCTGTGAGAAGAAGCCAAAATCTTCAGCTCCCATGGTCCATGGAAGGAGTTGCACATTGGATTCTCCAACGAAACCC
TCAAGCGACAAGCTCCTGAAAGTTCCCCCAACTTTCACAGTTTCGGGAACCACATGTAAAGCTTGCCCTCCGTCAACAAATGCAACCGTCACCACCTACATTGCT
GATTATTATGTTTTCAAGTTGCCTTTCACTGTTGCCAAAACTGGGTCCTTCGTCTTATGTGGGGCTGCTGCATGTCCACCCTTTCCACGGATCAAGGCTGAAAAG
TGTCCTGCTCCAGCACATACTGGACCCGGCCTAGAGGCTATGACACCGGTTGGTAAGGATGGCTGTACGTGCAATGCAAAGATTCCATCAATGTCATCAAGGGCA
TCTTCTTCATTTGATAAGCTCCATTACACTCTTCTCCAGGCTGGAAAACTAGCTTCACAGTTCCCTTCAAATAATAGCATATTCAAACAAACCCTGGCGATTTTA
CAAGAGAGGAATACGAATATTCTAGATTGCATTCTTGGAATTGAAAAGACAATAGAGATGTACCTGAAGAGGAAGGGCATCCATGTCTGCTCTGAGACCAAAAAC
AGGTGTAGAGGAAGAAGAAATAGAATCCCCTCTAATGGAAGCCACCACTCCAGTCTTGGCAACAGGCCATTGGTAACTGATTCCAAGCGAGTCGAGCTCAGACCT
CACGACTCTGGATACTCATGGATTCTCCTTCTAACTCCTTTTATCCATTCCATGAACTCCCTTTCCCTCGCCAAACCCAATAGATTTTGGGTCAGTGAGTGGAGC
TCCGACCCATCTCCGCCGTGCTCCGTCACCGACGGTCGCCACCAGGCCATCCCAAACACCAGCATCCAACAAAATGATTGGAAGCTCAAACCGCCGCCTCTCATC
TCAAAAACAAAGGTGCTTTGTCAGCTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTCATGGCCACAGCAGCGTGAAGAGCTGCTCCTATTGGAAGGGCTTCTTCATCAAGGACAAAGTGCGGTGAGTGCACTGGCCGATTTGATCCCAGAGTCT
CATTCCCTGTCCCAATCACCTGCAATCCTCTGTGAGAAGAAGCCAAAATCTTCAGCTCCCATGGTCCATGGAAGGAGTTGCACATTGGATTCTCCAACGAAACCC
TCAAGCGACAAGCTCCTGAAAGTTCCCCCAACTTTCACAGTTTCGGGAACCACATGTAAAGCTTGCCCTCCGTCAACAAATGCAACCGTCACCACCTACATTGCT
GATTATTATGTTTTCAAGTTGCCTTTCACTGTTGCCAAAACTGGGTCCTTCGTCTTATGTGGGGCTGCTGCATGTCCACCCTTTCCACGGATCAAGGCTGAAAAG
TGTCCTGCTCCAGCACATACTGGACCCGGCCTAGAGGCTATGACACCGGTTGGTAAGGATGGCTGTACGTGCAATGCAAAGATTCCATCAATGTCATCAAGGGCA
TCTTCTTCATTTGATAAGCTCCATTACACTCTTCTCCAGGCTGGAAAACTAGCTTCACAGTTCCCTTCAAATAATAGCATATTCAAACAAACCCTGGCGATTTTA
CAAGAGAGGAATACGAATATTCTAGATTGCATTCTTGGAATTGAAAAGACAATAGAGATGTACCTGAAGAGGAAGGGCATCCATGTCTGCTCTGAGACCAAAAAC
AGGTGTAGAGGAAGAAGAAATAGAATCCCCTCTAATGGAAGCCACCACTCCAGTCTTGGCAACAGGCCATTGGTAACTGATTCCAAGCGAGTCGAGCTCAGACCT
CACGACTCTGGATACTCATGGATTCTCCTTCTAACTCCTTTTATCCATTCCATGAACTCCCTTTCCCTCGCCAAACCCAATAGATTTTGGGTCAGTGAGTGGAGC
TCCGACCCATCTCCGCCGTGCTCCGTCACCGACGGTCGCCACCAGGCCATCCCAAACACCAGCATCCAACAAAATGATTGGAAGCTCAAACCGCCGCCTCTCATC
TCAAAAACAAAGGTGCTTTGTCAGCTGGAATGAAGAGGAGTTGACAACCAAATTGGGCTTCTTTGGGAATTTTCATATTGAGATTGAGACTATTTGGTTTATTTT
CATTCCCTTGTTTTTAGGGGTGAATTTCGTTTTTTCAATGCCAAATTCAAGAGAAAGAACTTTCATTGTGGAGTCCAATCATGAATTTTTCTTCTTTTATTTTTG
TACATAAATTCAAATTCTCATCAAGTTTCATTGGACTTTCTTTTCTTTAATATAGTTGAAAGAAAAAG
Protein sequenceShow/hide protein sequence
MLSWPQQREELLLLEGLLHQGQSAVSALADLIPESHSLSQSPAILCEKKPKSSAPMVHGRSCTLDSPTKPSSDKLLKVPPTFTVSGTTCKACPPSTNATVTTYIA
DYYVFKLPFTVAKTGSFVLCGAAACPPFPRIKAEKCPAPAHTGPGLEAMTPVGKDGCTCNAKIPSMSSRASSSFDKLHYTLLQAGKLASQFPSNNSIFKQTLAIL
QERNTNILDCILGIEKTIEMYLKRKGIHVCSETKNRCRGRRNRIPSNGSHHSSLGNRPLVTDSKRVELRPHDSGYSWILLLTPFIHSMNSLSLAKPNRFWVSEWS
SDPSPPCSVTDGRHQAIPNTSIQQNDWKLKPPPLISKTKVLCQLE