; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G069480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G069480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationCicolChr04:26179321..26184428
RNA-Seq ExpressionCcUC04G069480
SyntenyCcUC04G069480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]1.4e-4570Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK
        MGACATKPK +KAE+GEA        PEE+ A TKP++ GDEKA EI V D+KVDSK RSLSNLF  DQKEG+K     EK    DP EKQET  PETEK
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK

Query:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        Q I+P PEEK SE+NPP  EP VSDSVTEN T+ISSEKLMETP E NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]9.7e-3963.83Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV
        MGACATKPK +KAE+GEA        PEE+ A TKP++ GDEKA EIV D+              D+KEG+K     EK    DP EKQET  PETEKQ 
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV

Query:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        I+P PEEK SE+NPP  EP VSDSVTEN T+ISSEKLMETP E NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]1.2e-6077.2Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV
        MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPEN GD KA+EIV D+KVDSKSRSLS+LFTDQKEG KES E EK   E+P EKQ+TT PET KQ+
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV

Query:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SE+NPPE EPPVSDSVTENK      K +E+P E NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]8.5e-5976.68Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV
        MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPEN GD KA+EIV D+KVDSKSRSLS+LFTDQ EG KES E EK   E+P EKQ+TT PET KQ+
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV

Query:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SE+NPPE EPPVSDSVTENK      K +E+P E NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]2.5e-5069.95Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV
        MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPEN GD KA+EIV D               D+KEG KES E EK   E+P EKQ+TT PET KQ+
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV

Query:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SE+NPPE EPPVSDSVTENK      K +E+P E NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein5.0e-3360.96Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQ
        MGACATKPK LKAE+G+A        PEE+ A TKP++ GDEKA EI V D+KVDSK  SL++LF  QKEG+KE  E+      DP EKQET  PETEKQ
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQ

Query:  VINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKV
         INP PEEK SE+NPP  EP VSDSVTENKT+      METP           ++ IKVE+T END P EKTES+EKPTETEKEVKV
Subjt:  VINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKV

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X24.7e-3963.83Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV
        MGACATKPK +KAE+GEA        PEE+ A TKP++ GDEKA EIV D+              D+KEG+K     EK    DP EKQET  PETEKQ 
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQV

Query:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        I+P PEEK SE+NPP  EP VSDSVTEN T+ISSEKLMETP E NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  INPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X16.8e-4670Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK
        MGACATKPK +KAE+GEA        PEE+ A TKP++ GDEKA EI V D+KVDSK RSLSNLF  DQKEG+K     EK    DP EKQET  PETEK
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK

Query:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        Q I+P PEEK SE+NPP  EP VSDSVTEN T+ISSEKLMETP E NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X16.8e-4670Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK
        MGACATKPK +KAE+GEA        PEE+ A TKP++ GDEKA EI V D+KVDSK RSLSNLF  DQKEG+K     EK    DP EKQET  PETEK
Subjt:  MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEI-VHDEKVDSKSRSLSNLF-TDQKEGSKESKENEKAAAEDPSEKQETTAPETEK

Query:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        Q I+P PEEK SE+NPP  EP VSDSVTEN T+ISSEKLMETP E NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  QVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A6J1IUX1 early nodulin-75-like1.7e-2852.83Show/hide
Query:  MGACATKPKVLKAEAGEAPAPAPEP--SPEEVAAGTKPEN-DGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQ--------
        MGACATKPKVLKA++GEAPAPAP P  SPE+  A TK EN     + +EIV ++KV SK R LS+LF+DQ          EK AA DPSEK+        
Subjt:  MGACATKPKVLKAEAGEAPAPAPEP--SPEEVAAGTKPEN-DGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQ--------

Query:  -----------ETTAPETEKQVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPT
                   ET  PETEK+ INPP EEK  E+NPPE EPPVSDSVTEN              EP       IE   KVE+++EN+PP EKTES EKPT
Subjt:  -----------ETTAPETEKQVINPPPEEKRSESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPT

Query:  ETEKEV-KVISN
        ETE+ V KVISN
Subjt:  ETEKEV-KVISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCTACTAAGCCAAAGGTTCTTAAGGCGGAGGCCGGCGAGGCTCCGGCACCGGCGCCGGAGCCTTCTCCGGAGGAAGTGGCGGCCGGAACTAAACCGGA
GAATGACGGAGATGAGAAGGCCTCGGAGATCGTCCATGATGAGAAGGTGGATTCTAAGTCACGTTCTCTTAGTAATTTGTTCACCGATCAGAAAGAAGGAAGCAAGGAGT
CCAAAGAAAACGAGAAGGCGGCAGCAGAAGATCCATCGGAGAAACAAGAAACCACCGCACCGGAAACTGAAAAGCAAGTAATAAACCCACCGCCGGAGGAGAAGCGATCT
GAAAGCAACCCACCGGAGTCGGAGCCACCAGTTTCCGACTCTGTTACAGAGAACAAAACTATTATCTCATCAGAGAAACTAATGGAAACCCCAAAGGAACCAAACAAACA
CAATGACCCAAAAATTGAAGACAAAATCAAAGTGGAAATTACCAATGAAAATGATCCTCCTCTTGAGAAGACAGAGTCATCGGAGAAACCAACCGAAACAGAGAAGGAAG
TGAAGGTAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTTAATAATTAAAAATTTTGCATCTTCATTGTTTCTGACCAATTGTCCGAATCCCAAACTGCCGAAATCCCTCTTTATAAATTATTACACCCATTTTCTCTCTGCTT
CTCACTTTCATTTCACTCAAAGAGAGAGAGAGAGAGGAAAAAACAAAAAAAGAAAAGATGGGAGCTTGTGCTACTAAGCCAAAGGTTCTTAAGGCGGAGGCCGGCGAGGC
TCCGGCACCGGCGCCGGAGCCTTCTCCGGAGGAAGTGGCGGCCGGAACTAAACCGGAGAATGACGGAGATGAGAAGGCCTCGGAGATCGTCCATGATGAGAAGGTGGATT
CTAAGTCACGTTCTCTTAGTAATTTGTTCACCGATCAGAAAGAAGGAAGCAAGGAGTCCAAAGAAAACGAGAAGGCGGCAGCAGAAGATCCATCGGAGAAACAAGAAACC
ACCGCACCGGAAACTGAAAAGCAAGTAATAAACCCACCGCCGGAGGAGAAGCGATCTGAAAGCAACCCACCGGAGTCGGAGCCACCAGTTTCCGACTCTGTTACAGAGAA
CAAAACTATTATCTCATCAGAGAAACTAATGGAAACCCCAAAGGAACCAAACAAACACAATGACCCAAAAATTGAAGACAAAATCAAAGTGGAAATTACCAATGAAAATG
ATCCTCCTCTTGAGAAGACAGAGTCATCGGAGAAACCAACCGAAACAGAGAAGGAAGTGAAGGTAATTAGCAATTAAGAAATAATTTTTAAAAAAAATCTTTAATTAATT
AGCAGAGGAACTAATATCGAATTGTTTCATTTTCCGTCCTCTCTCTCTCTCT
Protein sequenceShow/hide protein sequence
MGACATKPKVLKAEAGEAPAPAPEPSPEEVAAGTKPENDGDEKASEIVHDEKVDSKSRSLSNLFTDQKEGSKESKENEKAAAEDPSEKQETTAPETEKQVINPPPEEKRS
ESNPPESEPPVSDSVTENKTIISSEKLMETPKEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN