CuGenDBv2

Gene ID	CcUC04G070110
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transmembrane protein 220
Genome location	CicolChr04:26879226..26881503
RNA-Seq Expression	CcUC04G070110
Synteny	CcUC04G070110
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

4.4e-63

85.14

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL

XP_008440175.1 PREDICTED: transmembrane protein 220 [Cucumis melo]

5.8e-63

84.93

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

XP_031742851.1 transmembrane protein 220 isoform X1 [Cucumis sativus]

1.5e-63

85.03

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRAL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG+A+
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRAL

XP_038881309.1 transmembrane protein 220 isoform X1 [Benincasa hispida]

2.1e-65

84.21

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YS CSLLMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW V +EAM  V KATMG GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLEPPL
        TGSGLVVCSMILHLIAA  SSSSS +IHRTSKSKREFPRYLTYG A+    L
Subjt:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLEPPL

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

3.6e-65

86.49

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YS CSLLMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW V +EAM  V KATMG GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA  SSSSS +IHRTSKSKREFPRYLTYG A L
Subjt:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

2.2e-63

85.14

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL

A0A1S3B186 transmembrane protein 220

2.8e-63

84.93

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A5D3CNK6 Transmembrane protein 220

2.8e-63

84.93

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSK+YSSCS+LMG LFAYSTA+QFNDPDW+LWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A6J1HG20 uncharacterized protein LOC111463236

2.4e-54

73.97

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YS CSLLM  LFAYSTA+QFNDPDW+LW+PLYGCACAVNLL WDV L+ +  + KAT+GLGIC+W+KVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVV SM+LHLIA SSSS     RT K +R F RY++YG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A6J1KP55 uncharacterized protein LOC111497019

1.2e-53

73.97

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSK+YS CSLLM  LFAYSTA+QFNDPDW+LW+PLYGCACAVNLL WDV LE +  V KAT+GLGIC+W+KVVAED+++GIAGFLSLDLSERVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVV SM+LHLIA SSSS     RT K +R F RY+++G A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

3.8e-28

51.24

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Query:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA P  ++  CSLLM  LFAYS ++Q NDPDW+ W PLY  AC VNL+ +   ++ M  + +  + LG+ + +KV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSS
         GSGLV+ SM+L L A+SSSS
Subjt:  TGSGLVVCSMILHLIAASSSS

Sequences

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CDS sequence

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ATGGCAACACCCTCCAAAGTATACAGCAGCTGCTCTCTGCTAATGGGGATTTTGTTTGCTTATTCCACAGCTCTTCAGTTTAACGATCCTGATTGGTTTTTATGG
GTTCCACTTTATGGGTGTGCTTGTGCTGTGAATCTTCTCAAATGGGATGTCTTCTTAGAAGCCATGAATCAAGTTGGTAAGGCAACAATGGGACTTGGAATATGT
ATGTGGATGAAGGTGGTAGCAGAGGATTATATGAATGGTATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTAGTGAGGGAGAAAACAGGAAGTGGATTG
GTTGTGTGTTCCATGATTTTACATCTGATAGCTGCATCATCATCATCATCCCCAAAAATTCACAGAACAAGTAAAAGTAAAAGGGAATTTCCAAGATATCTGACA
TATGGGCGTGCGCTCTTGGAACCTCCCTTGCTTCTCGTTCCAAAATTTAAAGCTCCAGATCTTTTTCCCTCAAATGGTAGGCTGTACATGTTCTCCAAATGTGGC
CTCAGCAACTTGAAGATTCACAGCCATTTCCTCCAGGCAGTAGCTCGCGTCGATAATTAA

mRNA sequence

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TTGTTGTTCGATCAGATAAGGTTTGAAAAAAGAAGCGAAAATGGCAACACCCTCCAAAGTATACAGCAGCTGCTCTCTGCTAATGGGGATTTTGTTTGCTTATTC
CACAGCTCTTCAGTTTAACGATCCTGATTGGTTTTTATGGGTTCCACTTTATGGGTGTGCTTGTGCTGTGAATCTTCTCAAATGGGATGTCTTCTTAGAAGCCAT
GAATCAAGTTGGTAAGGCAACAATGGGACTTGGAATATGTATGTGGATGAAGGTGGTAGCAGAGGATTATATGAATGGTATTGCAGGTTTTCTCTCTCTAGATTT
AAGTGAGAGAGTAGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTACATCTGATAGCTGCATCATCATCATCATCCCCAAAAATTCACAG
AACAAGTAAAAGTAAAAGGGAATTTCCAAGATATCTGACATATGGGCGTGCGCTCTTGGAACCTCCCTTGCTTCTCGTTCCAAAATTTAAAGCTCCAGATCTTTT
TCCCTCAAATGGTAGGCTGTACATGTTCTCCAAATGTGGCCTCAGCAACTTGAAGATTCACAGCCATTTCCTCCAGGCAGTAGCTCGCGTCGATAATTAA

Protein sequence

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MATPSKVYSSCSLLMGILFAYSTALQFNDPDWFLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREKTGSGL
VVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALLEPPLLLVPKFKAPDLFPSNGRLYMFSKCGLSNLKIHSHFLQAVARVDN

CcUC04G070110 (gene) of Watermelon (PI 537277) v1 genome