CuGenDBv2

Gene ID	CcUC04G070280
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mitochodrial transcription termination factor
Genome location	CicolChr04:27080015..27083952
RNA-Seq Expression	CcUC04G070280
Synteny	CcUC04G070280
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022133358.1 uncharacterized protein LOC111005954 [Momordica charantia]

3.7e-179

85.22

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        +V  +FKLRYL  SRQAF SIL  QP+E  Q L+VATC TVSA QV E  GEGTLAHANDS++VFRRWGCTDNDIA+IFARGPSL RSDLNQLQNKLHLL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        +GLGITSPDLVKIINCRPRFLKCRINNNFHERI FFLK+FE+KEVL+KAIVRNPSLLTYDFHNR+KPVIS YEEMGL+KKDLILMLISRP+LIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EK++YIQKTGLS+GD+M+KY VTI+GISRLETIRQKVANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL+A+
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLHLQI+GH+MLRALRMTEKRFLK FV SQPKDVADELM+FYQSAKGIKRLA+TS+K C  GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

XP_022158121.1 uncharacterized protein LOC111024679 [Momordica charantia]

2.1e-182

87.34

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        +V  +FKLRYLL SRQAF SIL NQP+EA Q L+VATC TVSA QV E VG+GTLAHANDS+EVFRRWGCTDNDIA+IFARGPSLRRSDL QLQNKLHLL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        +GLGITSPDLVKIINCRPRFLKCRINNNFH+RIEFFLKMFE+KEVL+KAIVRNPSLLTYDFHNR+KPVIS YEEMGL+KKDLILMLISRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EK+EYIQKTGLS+GD+M+KY VTI+GISRLETIRQKVANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLHLQI+G +MLRALRMTEKRFLK FV SQPK VADELM+FYQSAKG+KRLA+TS+K C  GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

XP_022978594.1 uncharacterized protein LOC111478530 isoform X1 [Cucurbita maxima]

3.8e-176

85.49

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        R V  FKL YLL SRQAF SILVN      QKLKVA+C TVSAKQVEEEVGEG LAHANDSTEVFRRWGC D+DIAQIFARGPSLRRSDLNQLQ+KL LL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        QGLGITSPDLVKIINC PRFLKCRINNNFHERIEFFLKMFE+KEVL+KAIVRNP LLT DFHN++KP ISQYEE+GL++KDLILML+SRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EKM YIQKTGL+ GD+M+KY VTIIGISRLETIRQKVANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NLE V
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLH+QI+G  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQSAKGIKRLA+TSRK    GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

XP_022978595.1 uncharacterized protein LOC111478530 isoform X2 [Cucurbita maxima]

3.8e-176

85.49

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        R V  FKL YLL SRQAF SILVN      QKLKVA+C TVSAKQVEEEVGEG LAHANDSTEVFRRWGC D+DIAQIFARGPSLRRSDLNQLQ+KL LL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        QGLGITSPDLVKIINC PRFLKCRINNNFHERIEFFLKMFE+KEVL+KAIVRNP LLT DFHN++KP ISQYEE+GL++KDLILML+SRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EKM YIQKTGL+ GD+M+KY VTIIGISRLETIRQKVANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NLE V
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLH+QI+G  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQSAKGIKRLA+TSRK    GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

XP_038881817.1 uncharacterized protein LOC120073205, partial [Benincasa hispida]

4.0e-181

86.91

Show/hide

Query:  CLRRVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKL
        CLR   D+F         QAFVSILV+QP+EAWQ LKVATC TVS KQVE+EVGEG LAHAND TEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKL
Subjt:  CLRRVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKL

Query:  HLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSS
        HLLQGLGITSPDLVKIINCRPRFLKC INNNFHE+IE FLK+FE+KEVLVKAIVRNPSLLTYDFH+RVK VISQYEEMGL+KKDLILMLISRPTLIPR+S
Subjt:  HLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSS

Query:  FNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL
        FNDEKMEYIQKTGLSQGD+MFKY VTIIGISRLETIR KVANLEKFGFTEDE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL
Subjt:  FNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL

Query:  EAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        +AVLKPRV L  KMEEMGLH+QI+GH +LRALRMTEKRFLKKF+YSQPKDVADELMQFYQ AKGIKRL +TSRK    GFPF
Subjt:  EAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BYX5 uncharacterized protein LOC111005954

1.8e-179

85.22

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        +V  +FKLRYL  SRQAF SIL  QP+E  Q L+VATC TVSA QV E  GEGTLAHANDS++VFRRWGCTDNDIA+IFARGPSL RSDLNQLQNKLHLL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        +GLGITSPDLVKIINCRPRFLKCRINNNFHERI FFLK+FE+KEVL+KAIVRNPSLLTYDFHNR+KPVIS YEEMGL+KKDLILMLISRP+LIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EK++YIQKTGLS+GD+M+KY VTI+GISRLETIRQKVANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL+A+
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLHLQI+GH+MLRALRMTEKRFLK FV SQPKDVADELM+FYQSAKGIKRLA+TS+K C  GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

A0A6J1E035 uncharacterized protein LOC111024679

1.0e-182

87.34

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        +V  +FKLRYLL SRQAF SIL NQP+EA Q L+VATC TVSA QV E VG+GTLAHANDS+EVFRRWGCTDNDIA+IFARGPSLRRSDL QLQNKLHLL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        +GLGITSPDLVKIINCRPRFLKCRINNNFH+RIEFFLKMFE+KEVL+KAIVRNPSLLTYDFHNR+KPVIS YEEMGL+KKDLILMLISRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EK+EYIQKTGLS+GD+M+KY VTI+GISRLETIRQKVANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLHLQI+G +MLRALRMTEKRFLK FV SQPK VADELM+FYQSAKG+KRLA+TS+K C  GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

A0A6J1GFZ6 uncharacterized protein LOC111453817

2.0e-170

83.64

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        R V  FKL YLL SRQAF SILVN      QKLKVA+C TVSAKQVEE+VGE  LAHANDSTEVFRRWGC D+DIAQIFAR PSLRRSDLN LQ+KL LL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        QG+GITSPDLVKIINC PRFLK RINNNFHERIEFFLKMFE+KE L+KAIV+NP LLTYDFHN++KP ISQYEE+GL++KDLILML+SRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EKM YIQKTGL+ GD+M+KY VTIIGISRLETIRQKVA+LEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTLKLPAK ILNYPFLLY NLEAV
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGL +QI+G  MLRALRMTEKRFL+ FV SQPKDVADELMQFYQSAKGIKRLA+TSRK    GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

A0A6J1IQK9 uncharacterized protein LOC111478530 isoform X2

1.9e-176

85.49

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        R V  FKL YLL SRQAF SILVN      QKLKVA+C TVSAKQVEEEVGEG LAHANDSTEVFRRWGC D+DIAQIFARGPSLRRSDLNQLQ+KL LL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        QGLGITSPDLVKIINC PRFLKCRINNNFHERIEFFLKMFE+KEVL+KAIVRNP LLT DFHN++KP ISQYEE+GL++KDLILML+SRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EKM YIQKTGL+ GD+M+KY VTIIGISRLETIRQKVANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NLE V
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLH+QI+G  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQSAKGIKRLA+TSRK    GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

A0A6J1IUG6 uncharacterized protein LOC111478530 isoform X1

1.9e-176

85.49

Show/hide

Query:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL
        R V  FKL YLL SRQAF SILVN      QKLKVA+C TVSAKQVEEEVGEG LAHANDSTEVFRRWGC D+DIAQIFARGPSLRRSDLNQLQ+KL LL
Subjt:  RVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLL

Query:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND
        QGLGITSPDLVKIINC PRFLKCRINNNFHERIEFFLKMFE+KEVL+KAIVRNP LLT DFHN++KP ISQYEE+GL++KDLILML+SRPTLIPRSSFND
Subjt:  QGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFND

Query:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV
        EKM YIQKTGL+ GD+M+KY VTIIGISRLETIRQKVANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NLE V
Subjt:  EKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAV

Query:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        LKPRVLLS KMEEMGLH+QI+G  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQSAKGIKRLA+TSRK    GFPF
Subjt:  LKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

SwissProt top hits

e value

%identity

Alignment

F4JVI3 Transcription termination factor MTERF5, chloroplastic

4.8e-04

25.71

Show/hide

Query:  YDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEK--MEYIQKTGL--SQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALL
        Y    ++KPV+    ++G+ K D+  +L  RP +   S  ++ K  M +++  G+  +Q  ++   F  I+  SR + +   V  L + G TE++   +L
Subjt:  YDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEK--MEYIQKTGL--SQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALL

Query:  GRSPLILTLSV-DKVQRNMTFILCTLKLPAKVILN-YPFLLYFNLEAVLKP--RVLLSR--KMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDV
         R P I++ SV DK++  M +   +L +   V+L+  P     ++E+ LKP     L +   ++E+G+ +   G     +L+   +  + K+ Y Q  D 
Subjt:  GRSPLILTLSV-DKVQRNMTFILCTLKLPAKVILN-YPFLLYFNLEAVLKP--RVLLSR--KMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDV

Query:  -ADELMQFYQ
           EL++F Q
Subjt:  -ADELMQFYQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G62110.1 Mitochondrial transcription termination factor family protein

1.9e-08

21.3

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Query:  TVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQ-LQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLK
        T  A+ + ++V      + +    +FR +G T++ I+ I    P L   D  + L  KL  L+  G +SP+L +I++  P+ L  +   +     +F  +
Subjt:  TVSAKQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQ-LQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLK

Query:  MFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVA
        + E  +      +  P        N+++ V S   ++G+ +K L  +LIS    +      +E ++ + + G       F   +  +     +TI ++V 
Subjt:  MFETKEVLVKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVA

Query:  NLEKFGFTEDETFALLGRSPLILTLSVDKV
          + FGF  ++ +A+  + P  L  S  K+
Subjt:  NLEKFGFTEDETFALLGRSPLILTLSVDKV

AT1G62150.1 Mitochondrial transcription termination factor family protein

8.9e-06

23.35

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Query:  RVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFN-DEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKF---GFTEDETFALLGRSPL
        R++   + Y+  GLT  D+  +    P  +  S     +  E +++ GL + + +  +    + +   E  +Q + ++E F   GF+ DE   ++   P 
Subjt:  RVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFN-DEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKF---GFTEDETFALLGRSPL

Query:  ILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFY
         +  S + V++   F++  +  P KVI  +P +L +++E    PR  + + +   GL L  E   M   L  T++ FLK++V    + +  ELM  +
Subjt:  ILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFY

AT1G79220.1 Mitochondrial transcription termination factor family protein

1.9e-96

51.95

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Query:  EVGEGTLAH--ANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVL
        EVGE        +   +V RRWGC D++I+++F R P+L+R+++ QL+ KL LL+ LGITS DLVKI+NCRPRF  CR+     ERI +F+++  +KEVL
Subjt:  EVGEGTLAH--ANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVL

Query:  VKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFT
         + I+RNPSL+ YD  +++KP I  Y+ +G +++DL+ MLISRPTLIPR++FN+EK EYI+KTG+++  +MFKY   IIG+SR+ETI +KV NLEKFGF+
Subjt:  VKAIVRNPSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFT

Query:  EDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPK
        E+E + L G+ P++L+LSV+KVQRNMTF++ ++KLPA  ++ +P LL  NLE+ LKPR  L +++ EM L   I+  S+ RA+RM+EKRFLK +V   P+
Subjt:  EDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPK

Query:  DVADELMQFYQSAKGIKRLADTSRKKCPWGFPF
        D+A ELM+FY+ +K +KRLA+ S+K    GFPF
Subjt:  DVADELMQFYQSAKGIKRLADTSRKKCPWGFPF

AT2G34620.1 Mitochondrial transcription termination factor family protein

3.9e-09

22.5

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Query:  DIAQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRN-PSLLTYDFHNRVKPVISQY
        D  +  +  P L  + L+ +Q+ LH LQ  GI   DL +I+   P+ L   +    +    F        E   + +++  P LL     +++KP +   
Subjt:  DIAQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRN-PSLLTYDFHNRVKPVISQY

Query:  EEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLE-TIRQKVANLEKFGFTEDETFALLGRSPLILTLSVD-KVQR
        + +GL  KDL  +    P L+                                 +S +E T+  K+  LE  GF+  E   ++ R P + T S++   + 
Subjt:  EEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLE-TIRQKVANLEKFGFTEDETFALLGRSPLILTLSVD-KVQR

Query:  NMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVAD
         + + +  +K   + +  +P    F+LE  +KPR L S    E GL L +        L+ T++ F  + + + P  VA+
Subjt:  NMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVAD

AT5G64950.1 Mitochondrial transcription termination factor family protein

6.8e-14

25.27

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Query:  LQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPS--LLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRP
        L+ KL   + +G T   L K ++     +   +       +E    +   K   +  I+      LL+ D +  + P IS  E  G+    L  +L  +P
Subjt:  LQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRNPS--LLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRP

Query:  TLIPRSSFNDEKME-YIQKT---GLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVI
         +    + ++EK+  Y+ +    G +   RM  + V  +     +T  +KV      GF+EDE   ++ RSP ++  S DK+     F L  + L  + +
Subjt:  TLIPRSSFNDEKME-YIQKT---GLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVI

Query:  LNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIE--GHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ
           P +L +NLE  + PR+ + + + E GL L+ E    +M+  + MTE+ FL+K+V     ++A+EL+  Y+
Subjt:  LNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIE--GHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ

Sequences

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CDS sequence

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ATGCAGGGTGTGTTGGTGGTTATTTTTGTTGTGTTCCTTTCTTGTTCAATTGCTGCCTTTTCCAATGAAAGCCATGACTTTGCTCCACAGGCCAGCCGCACGCCTACCGC
CACCCCATTCTCTCTCACGTTCGGGTGCAGCGCCCAAGTAACCACCGCCGTCATTCATCCCGTAGTCGTCGCCGGCAGTTGCAACGCCGTTCGCCGTCGCCAATCGAGCC
GACGCGCCTCCTCCGCCTGTTCATCGCCGAAAACCGCTGCCGCTCTGCGCCACCGCCCAGTCACTGTCGAGACCAATTCCAATGGGTGTCTTCGTGACGGTTCGAGTTGG
GCAAATTCATTGAGGCCAAGGGACCAAATTTTTGGAGTTAAATCTATTTGGGACTGGAACGTGGTTTTCGTAAGATCAAAGAGACACTACTATTGGAATGCTTTAGTGCC
AAGTCATTTGATGATGAATTTGACGAAAAGTTTTATTGAGTGGGCATTTGCTCTTAAAACCCTGGAAATTGTGTTCAAAATCTGCCTTAGAAGAGTTGTGGATTATTTCA
AGCTCCGCTATTTACTATTTTCTAGGCAAGCATTTGTTTCCATTTTGGTGAACCAACCTGTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTTCACTGTAAGTGCC
AAACAAGTTGAAGAGGAGGTGGGAGAAGGGACGTTAGCACATGCCAATGACTCTACCGAAGTTTTTCGAAGATGGGGTTGTACTGACAATGATATTGCACAAATCTTTGC
ACGCGGGCCTTCACTGCGCAGGAGTGACTTAAACCAACTACAAAATAAGCTCCATCTGCTTCAAGGCCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGTC
GTCCCCGGTTCCTCAAATGTCGGATTAACAACAACTTCCATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAAACTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAAC
CCCTCGCTTTTGACTTATGATTTCCATAACAGAGTCAAACCTGTAATTTCCCAGTATGAAGAAATGGGTCTTACTAAAAAGGATTTGATTCTCATGCTTATATCTCGCCC
CACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACTGGGCTCTCACAGGGTGACAGGATGTTCAAATACTTTGTTACAATCATTGGTA
TCTCACGGCTTGAAACGATACGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGACATTTGCCCTGCTTGGACGATCTCCCCTTATCTTGACTCTA
TCAGTCGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACGTTGAAGTTACCTGCTAAAGTTATTCTCAACTATCCATTTCTATTATATTTTAACCTGGAAGCTGT
CTTGAAGCCACGGGTGCTTCTCTCACGAAAGATGGAGGAAATGGGTCTCCATTTGCAGATTGAAGGCCATTCAATGCTCAGGGCCCTTAGGATGACAGAGAAGAGATTCT
TGAAGAAATTTGTTTATAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGACACCTCAAGGAAGAAATGT
CCTTGGGGATTTCCTTTCTGA

mRNA sequence

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Protein sequence

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MQGVLVVIFVVFLSCSIAAFSNESHDFAPQASRTPTATPFSLTFGCSAQVTTAVIHPVVVAGSCNAVRRRQSSRRASSACSSPKTAAALRHRPVTVETNSNGCLRDGSSW
ANSLRPRDQIFGVKSIWDWNVVFVRSKRHYYWNALVPSHLMMNLTKSFIEWAFALKTLEIVFKICLRRVVDYFKLRYLLFSRQAFVSILVNQPVEAWQKLKVATCFTVSA
KQVEEEVGEGTLAHANDSTEVFRRWGCTDNDIAQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCRINNNFHERIEFFLKMFETKEVLVKAIVRN
PSLLTYDFHNRVKPVISQYEEMGLTKKDLILMLISRPTLIPRSSFNDEKMEYIQKTGLSQGDRMFKYFVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTL
SVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSRKMEEMGLHLQIEGHSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLADTSRKKC
PWGFPF

CcUC04G070280 (gene) of Watermelon (PI 537277) v1 genome