; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G071880 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G071880
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCicolChr04:28562388..28563884
RNA-Seq ExpressionCcUC04G071880
SyntenyCcUC04G071880
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143420.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]2.6e-5990.84Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS
        M CEC NNGVIG RSR ILC  +SLLFFLILASTQMRFMAEGR ISR+GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS TKNSS
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS

Query:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        TM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_008440444.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]7.5e-5990.08Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS
        M CEC NNGVIG RSR ILC  +SLLFFLIL STQMRFMAEGR ISR+GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS TKNSS
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS

Query:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        TM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_022132530.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]4.3e-5482.95Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM
        M CECNNNGVIG RSRILC+T+  LF LILASTQMRFMAEGRL+ + G+TV  E+K+VLRGQIGSRPPKCERRCSWCGHCEAIQVP NPQKSA  NSS  
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM

Query:  NNIAYARDEASNYKPMSWKCKCGSLIFNP
        NN+AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_038882800.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida]9.5e-6293.02Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM
        M CEC NNGV+GSRSRILCST+SLLFFLILASTQMRFMAEGRLISR+GKTVN+EDK+VLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSA KNSSTM
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM

Query:  NNIAYARDEASNYKPMSWKCKCGSLIFNP
         NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_038882801.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida]2.9e-5890.7Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM
        M CEC NNGV+GSRSRILCST+SLLFFLILASTQMRFMAEGRLISR+   VN+EDK+VLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSA KNSSTM
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM

Query:  NNIAYARDEASNYKPMSWKCKCGSLIFNP
         NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NNIAYARDEASNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGK0 Epidermal patterning factor-like protein1.3e-5990.84Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS
        M CEC NNGVIG RSR ILC  +SLLFFLILASTQMRFMAEGR ISR+GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS TKNSS
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS

Query:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        TM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A1S3B1V9 Epidermal patterning factor-like protein3.6e-5990.08Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS
        M CEC NNGVIG RSR ILC  +SLLFFLIL STQMRFMAEGR ISR+GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS TKNSS
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS

Query:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        TM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A5A7T4J5 Epidermal patterning factor-like protein3.6e-5990.08Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS
        M CEC NNGVIG RSR ILC  +SLLFFLIL STQMRFMAEGR ISR+GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS TKNSS
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSS

Query:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        TM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  TMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1BSQ3 Epidermal patterning factor-like protein2.1e-5482.95Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM
        M CECNNNGVIG RSRILC+T+  LF LILASTQMRFMAEGRL+ + G+TV  E+K+VLRGQIGSRPPKCERRCSWCGHCEAIQVP NPQKSA  NSS  
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM

Query:  NNIAYARDEASNYKPMSWKCKCGSLIFNP
        NN+AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein6.0e-5486.05Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM
        M CECNNNGVIG RSRILC+T+S LFFLILASTQMRFMAEGR IS+SGKTV +EDK+VLRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SS M
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM

Query:  NNIAYARDEASNYKPMSWKCKCGSLIFNP
         NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NNIAYARDEASNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 31.8e-0736.62Show/hide
Query:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC
        N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+++I +     +NY+P  W+C C
Subjt:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.5e-0427.56Show/hide
Query:  GVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISR------SGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNN
        G    R R L + L     L L S      A+GR I +       G  + +  +    G  GS PP C  +C  C  C+ + VP  P  S          
Subjt:  GVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISR------SGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNN

Query:  IAYARDEASNYKPMSWKCKCGSLIFNP
                  Y P +W+CKCG+ +F P
Subjt:  IAYARDEASNYKPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 12.6e-0937.18Show/hide
Query:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S     +          +++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 54.2e-0429.73Show/hide
Query:  LLFFLILASTQMRFMAEG-----RLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSW
        LLFF   ++  ++  + G     + I+RSG      D+  L G  GS PP C  +C  C  C+A+ VP  P                       Y P +W
Subjt:  LLFFLILASTQMRFMAEG-----RLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSW

Query:  KCKCGSLIFNP
        +CKCG+ +F P
Subjt:  KCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 23.1e-2351.69Show/hide
Query:  LLFFLILASTQMRFMAEGRLISRS---GKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNIAYAR-DEAS
        LL  LIL ST    MA GR    S    K+ + + KM++RG IGSRPP+CER RC  CGHCEAIQVP NPQ        +++ +SS   ++ Y R D+++
Subjt:  LLFFLILASTQMRFMAEGRLISRS---GKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNIAYAR-DEAS

Query:  NYKPMSWKCKCGSLIFNP
        NYKPMSWKCKCG+ I+NP
Subjt:  NYKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein1.3e-0836.62Show/hide
Query:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC
        N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+++I +     +NY+P  W+C C
Subjt:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC

AT3G22820.1 allergen-related3.0e-0529.73Show/hide
Query:  LLFFLILASTQMRFMAEG-----RLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSW
        LLFF   ++  ++  + G     + I+RSG      D+  L G  GS PP C  +C  C  C+A+ VP  P                       Y P +W
Subjt:  LLFFLILASTQMRFMAEG-----RLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSW

Query:  KCKCGSLIFNP
        +CKCG+ +F P
Subjt:  KCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.0e-0527.56Show/hide
Query:  GVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISR------SGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNN
        G    R R L + L     L L S      A+GR I +       G  + +  +    G  GS PP C  +C  C  C+ + VP  P  S          
Subjt:  GVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISR------SGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNN

Query:  IAYARDEASNYKPMSWKCKCGSLIFNP
                  Y P +W+CKCG+ +F P
Subjt:  IAYARDEASNYKPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein2.2e-2451.69Show/hide
Query:  LLFFLILASTQMRFMAEGRLISRS---GKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNIAYAR-DEAS
        LL  LIL ST    MA GR    S    K+ + + KM++RG IGSRPP+CER RC  CGHCEAIQVP NPQ        +++ +SS   ++ Y R D+++
Subjt:  LLFFLILASTQMRFMAEGRLISRS---GKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNIAYAR-DEAS

Query:  NYKPMSWKCKCGSLIFNP
        NYKPMSWKCKCG+ I+NP
Subjt:  NYKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein1.8e-1037.18Show/hide
Query:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S     +          +++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCGAGTGTAACAACAATGGCGTCATTGGCTCGCGCAGTAGAATCTTGTGTTCGACTCTTTCTCTTCTCTTTTTTCTGATTTTGGCATCCACCCAGATG
AGATTTATGGCTGAAGGCAGATTGATTTCAAGGAGTGGCAAGACAGTGAATAATGAAGATAAAATGGTATTGAGAGGACAAATTGGGTCGAGGCCTCCAAAATGT
GAGAGAAGATGCAGCTGGTGTGGACATTGTGAGGCCATCCAAGTTCCAGCAAACCCACAAAAATCAGCAACTAAAAACTCTTCAACCATGAACAACATAGCCTAT
GCTAGAGATGAAGCCTCCAATTACAAACCCATGAGCTGGAAATGCAAATGTGGAAGCTTAATCTTCAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
CAGGCCAATTCATGTTAGCCAAAATCTTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGTGGGAGTGTTCAGAAACAAAATC
AGAAGGAAACTCACAAGAAAACCCAAATTCCAAAAGTTGAATTTAAACAAATATACAATTAAAAGAAGGAAGAAGAGAAAGGGAAACGAAAACGAAATCCCACTA
CTCTCACACAGCTGCCATTGCTGATTGCTCTGCTCACATCTGGTTAGCAGCATTTTGGAGCATTAGCAAAATTTTGCTTCCTTCTTTCTCTTCTCTGTCCTCAAT
TATTTGTTTTTGCAAATTACAAACCCCTTTTCCCAGGAATTTTATTTTCTGTTGGGTTAATGGTTTTTGGTGGCTCTTCTTTCGAGTTCTGCACTTTTCGGTACT
CTCTCTTCTTTCTATCTTTTTCATTTTTTTTTTGCCTTCCACGTTCCATCATCTCAAATATCTTTCCCAGACTCAGACAGATTCAAAGCAAATTATATTATATAT
ATTTACACATACCAGCAGCATAGAGTTCAAATTCAGAGGCTAATCTCATCCATTCTGATTCTGATTTAACTCACACTTCATTCCTCCACCCACTTTTTTCTTTCT
ATCTGATTAGCTTTTTCGCTTGGTTTTATTTTTAACCTCCCTTTCTTCAGGGAGAATTTCCCTGTCTCTTTCACACACTGCCCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTGTGAGAAGAAAAGGAAAAATGGTGTGCGAGTGTAACAACAATGGCGTCATTGGCTCGCGCAGTAGAATCTTGTGTTCGACTCTTTCTCTTCTCTTTTT
TCTGATTTTGGCATCCACCCAGATGAGATTTATGGCTGAAGGCAGATTGATTTCAAGGAGTGGCAAGACAGTGAATAATGAAGATAAAATGGTATTGAGAGGACA
AATTGGGTCGAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGGACATTGTGAGGCCATCCAAGTTCCAGCAAACCCACAAAAATCAGCAACTAAAAACTC
TTCAACCATGAACAACATAGCCTATGCTAGAGATGAAGCCTCCAATTACAAACCCATGAGCTGGAAATGCAAATGTGGAAGCTTAATCTTCAATCCTTAACTATT
TAATAGAATCCCCCCTCTCTCAATCTCTTCCTCTGTAAATTGGTGATTATATATGATTGTTAATTTCTTTAACTTAACCACCCTGATTTCTCTATCTCTCTTTCT
TTTTAATTTGTACTGCA
Protein sequenceShow/hide protein sequence
MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGRLISRSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAY
ARDEASNYKPMSWKCKCGSLIFNP