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CcUC04G072880 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G072880
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMyb transcription factor
Genome locationCicolChr04:29341136..29342151
RNA-Seq ExpressionCcUC04G072880
SyntenyCcUC04G072880
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8729885.1 hypothetical protein HU200_017346 [Digitaria exilis]5.7e-3573.33Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM-WSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTN
        MGRSPCCD + LKKGPW+PEEDQKL+ +IQ HG G+WR+LPKLAGM WSAIA+ LPG+TDNE+KNFWNTH+K+KLI++GFDPMTH  +T+
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM-WSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTN

PIN11880.1 Transcription factor, Myb superfamily [Handroanthus impetiginosus]4.0e-3673.68Show/hide
Query:  MGRSPCCD-GSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        MGRSPCCD G+ LKKGPW+PEED KLI +IQ HG G+WR+LPKLAGMWSAIA  LPG+TDNE+KNFWNTH+K+KLI++GFDPMTH  +T+I  SL
Subjt:  MGRSPCCD-GSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

RYR35914.1 hypothetical protein Ahy_A10g051009 [Arachis hypogaea]9.1e-3365.56Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI
        MGR+PCCD + LKKGPW+PEEDQKLI +IQ HG GNWR+LPK AGMWSAIA +LPG+TDNE+KN+WNTH++++L+ +G DP+TH  + ++
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI

XP_022950523.1 transcription factor MYB41-like [Cucurbita moschata]2.0e-3252.94Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD S LKKGPW+PEEDQKLI HIQNHG G+WR+LPKLAG+                                          WSAIA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNTH+K+KLI++GFDPMTH  +T+I  SL
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

XP_038882267.1 transcription factor MYB93-like [Benincasa hispida]1.8e-3354.41Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGR PCCDG  LK+GPWSPEEDQKLITHIQNHGQGNWR+L KLAG+                                          WSAIARQLPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNT +K+KLI++GFDPMTH  +T+IS +L
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

TrEMBL top hitse value%identityAlignment
A0A2G9H3K7 Transcription factor, Myb superfamily1.9e-3673.68Show/hide
Query:  MGRSPCCD-GSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        MGRSPCCD G+ LKKGPW+PEED KLI +IQ HG G+WR+LPKLAGMWSAIA  LPG+TDNE+KNFWNTH+K+KLI++GFDPMTH  +T+I  SL
Subjt:  MGRSPCCD-GSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

A0A371H1V5 Transcription factor MYB102 (Fragment)4.9e-3250Show/hide
Query:  NRMGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPG
        N MGRSPCCD + LKKGPW+PEEDQKL+ HIQ HG G+WR+LPKLAG+                                          WSAIA  LPG
Subjt:  NRMGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPG

Query:  QTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        +TDNE+KNFWNTH+K+KLI++GFDPMTH  +T++  SL
Subjt:  QTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

A0A445BB68 HTH myb-type domain-containing protein4.4e-3365.56Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI
        MGR+PCCD + LKKGPW+PEEDQKLI +IQ HG GNWR+LPK AGMWSAIA +LPG+TDNE+KN+WNTH++++L+ +G DP+TH  + ++
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI

A0A6J1GF42 transcription factor MYB41-like9.8e-3352.94Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD S LKKGPW+PEEDQKLI HIQNHG G+WR+LPKLAG+                                          WSAIA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNTH+K+KLI++GFDPMTH  +T+I  SL
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

A0A6J1ITC6 transcription factor MYB41-like9.8e-3352.94Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD S LKKGPW+PEEDQKLI HIQNHG G+WR+LPKLAG+                                          WSAIA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNTH+K+KLI++GFDPMTH  +T+I  SL
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

SwissProt top hitse value%identityAlignment
Q9LDR8 Transcription factor MYB1025.4e-2843.18Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        M RSPCC+ + LKKGPW+ EEDQKL+ +IQ HG GNWR+LPK AG+                                          WSAIA +LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI
        DNE+KNFWNTH+++KL+ +G DP+TH  + ++
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI

Q9LE63 Transcription factor MYB1065.4e-2844.12Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD + LKKGPW+PEEDQKL+ +I+ HG G+WRSLP+ AG+                                          WSAIA  LP +T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTH-HTQTNISWS
        DNE+KN+WNTH+K++LI++G DP+TH H    +S S
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTH-HTQTNISWS

Q9LXF1 Transcription factor MYB162.0e-2744.44Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD   LKKGPW+PEEDQKL+ +I+ HG G+WRSLP+ AG+                                          WSAIA  LP +T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTH
        DNE+KN+WNTH+K++L+++G DP+TH
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTH

Q9S9Z2 Transcription factor MYB937.5e-3046.32Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD + LKKGPW+PEEDQKLI +I  HG G+WR+LPKLA +                                          WSAIA  L G+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNTH+K+KLI++G DP+TH  +T++  SL
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

Q9SBF3 Transcription factor MYB924.4e-3046.21Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSP  D S LKKGPW+P+ED+KL+ ++Q HG  +WR+LPKLAG+                                          WS IA QLPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI
        DNE+KNFWNTH+K+KLI++GFDPMTH  +T+I
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI

Arabidopsis top hitse value%identityAlignment
AT1G34670.1 myb domain protein 935.3e-3146.32Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD + LKKGPW+PEEDQKLI +I  HG G+WR+LPKLA +                                          WSAIA  L G+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL
        DNE+KNFWNTH+K+KLI++G DP+TH  +T++  SL
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL

AT3G02940.1 myb domain protein 1078.2e-3246.56Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD S LKKGPW+PEEDQKLI HI+ HG G+WR+LPK AG+                                          WS+IA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN
        DNE+KN+WNTH+++KLI++G DP+TH  +T+
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN

AT5G10280.1 myb domain protein 923.1e-3146.21Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSP  D S LKKGPW+P+ED+KL+ ++Q HG  +WR+LPKLAG+                                          WS IA QLPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI
        DNE+KNFWNTH+K+KLI++GFDPMTH  +T+I
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTNI

AT5G16770.1 myb domain protein 97.7e-3044.27Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD + LKKGPW+ EED KLI HIQ HG G+WR+LPK AG+                                          WS+IA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN
        DNE+KN+WNTH+++KL+++G DP+TH  +T+
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN

AT5G16770.2 myb domain protein 97.7e-3044.27Show/hide
Query:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT
        MGRSPCCD + LKKGPW+ EED KLI HIQ HG G+WR+LPK AG+                                          WS+IA  LPG+T
Subjt:  MGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGM------------------------------------------WSAIARQLPGQT

Query:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN
        DNE+KN+WNTH+++KL+++G DP+TH  +T+
Subjt:  DNELKNFWNTHVKRKLIEIGFDPMTHHTQTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGAATGGGGAGGAGCCCTTGCTGTGACGGAAGTGCCCTCAAAAAGGGCCCTTGGTCCCCTGAAGAAGACCAAAAGCTGATCACACATATCCAAAACCATGGCCA
AGGCAACTGGAGATCCCTTCCCAAACTCGCCGGTATGTGGTCGGCAATTGCAAGACAACTACCTGGACAGACGGACAATGAACTAAAGAATTTTTGGAACACCCACGTGA
AGAGAAAACTAATTGAGATAGGTTTTGATCCAATGACCCACCATACTCAAACTAACATATCTTGGAGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGAATGGGGAGGAGCCCTTGCTGTGACGGAAGTGCCCTCAAAAAGGGCCCTTGGTCCCCTGAAGAAGACCAAAAGCTGATCACACATATCCAAAACCATGGCCA
AGGCAACTGGAGATCCCTTCCCAAACTCGCCGGTATGTGGTCGGCAATTGCAAGACAACTACCTGGACAGACGGACAATGAACTAAAGAATTTTTGGAACACCCACGTGA
AGAGAAAACTAATTGAGATAGGTTTTGATCCAATGACCCACCATACTCAAACTAACATATCTTGGAGTTTATAA
Protein sequenceShow/hide protein sequence
MNRMGRSPCCDGSALKKGPWSPEEDQKLITHIQNHGQGNWRSLPKLAGMWSAIARQLPGQTDNELKNFWNTHVKRKLIEIGFDPMTHHTQTNISWSL