; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G073230 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G073230
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionE3 ubiquitin-protein ligase RHA2B-like
Genome locationCicolChr04:29595248..29596179
RNA-Seq ExpressionCcUC04G073230
SyntenyCcUC04G073230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036272.1 putative E3 ubiquitin-protein ligase RHA2B [Cucumis melo var. makuwa]8.5e-8196.79Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKR+ITTAQFLKLIE+KNPTIRFSNKVT S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

XP_008440648.1 PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Cucumis melo]1.2e-7997.39Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKR+ITTAQFLKLIE+KNPTIRFSNKVT S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

XP_022132528.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]8.8e-7892.31Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRP ADKR+ITT Q+ KLIEE+NPTIRFSNK+T+S ADQCAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

XP_022963436.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita moschata]1.4e-7893.59Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLL+LE VIL+RTIFGLRPN DKR+I TAQFLKLIEEKNPTIRFSNK+T+S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

XP_038883588.1 E3 ubiquitin-protein ligase RHA2B-like [Benincasa hispida]1.9e-8096.75Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKR++TTAQFLKLIEEKNPTIRFSNK+T+S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

TrEMBL top hitse value%identityAlignment
A0A0A0KM08 RING-type domain-containing protein2.7e-8095.51Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPN+DKR+ITTAQF KLIE+KNPTIRFSNKVT S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

A0A1S3B160 probable E3 ubiquitin-protein ligase RHA2B6.0e-8097.39Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKR+ITTAQFLKLIE+KNPTIRFSNKVT S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

A0A5A7SYH1 Putative E3 ubiquitin-protein ligase RHA2B4.1e-8196.79Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKR+ITTAQFLKLIE+KNPTIRFSNKVT S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

A0A6J1BWI1 E3 ubiquitin-protein ligase RHA2B-like4.3e-7892.31Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRP ADKR+ITT Q+ KLIEE+NPTIRFSNK+T+S ADQCAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

A0A6J1HG49 E3 ubiquitin-protein ligase RHA2B-like isoform X16.6e-7993.59Show/hide
Query:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAVFFTLL+LE VIL+RTIFGLRPN DKR+I TAQFLKLIEEKNPTIRFSNK+T+S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS
        CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG S
Subjt:  CLDNWLKLCFATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTS

SwissProt top hitse value%identityAlignment
Q0VD51 E3 ubiquitin-protein ligase RNF131.3e-1050Show/hide
Query:  DQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        D CA+CL E+E+G+K+R L C+H +H  C+D WL     TCP+C+ KV+P
Subjt:  DQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.5e-1143.94Show/hide
Query:  PTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

Q9XF92 Brassinosteroid-responsive RING protein 11.3e-1042.11Show/hide
Query:  LIEEKNPTIRFSNKVTA--SFADQCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI
        LI E  P I+F     +     + CAVCL EFE  +++R L+ C H FH+ CLD W+     TCPLCR+  +PD++
Subjt:  LIEEKNPTIRFSNKVTA--SFADQCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI

Q9ZT50 E3 ubiquitin-protein ligase RHA2A3.5e-1356.14Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR

Q9ZU51 E3 ubiquitin-protein ligase RHA2B5.5e-1439.6Show/hide
Query:  LLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL
        LL  F   +R++  L P++   ++ T+    L ++ N    FS + + + A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A2.5e-1456.14Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYHR

AT2G01150.1 RING-H2 finger protein 2B3.9e-1539.6Show/hide
Query:  LLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL
        LL  F   +R++  L P++   ++ T+    L ++ N    FS + + + A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVL

Query:  P
        P
Subjt:  P

AT3G19950.1 RING/U-box superfamily protein1.1e-1243.94Show/hide
Query:  PTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

AT3G61460.1 brassinosteroid-responsive RING-H29.0e-1242.11Show/hide
Query:  LIEEKNPTIRFSNKVTA--SFADQCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI
        LI E  P I+F     +     + CAVCL EFE  +++R L+ C H FH+ CLD W+     TCPLCR+  +PD++
Subjt:  LIEEKNPTIRFSNKVTA--SFADQCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDI

AT5G45290.1 RING/U-box superfamily protein5.3e-1240Show/hide
Query:  IRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYH
        I+   K  +    QC +CL E+EE + +R L C+H FHK C+D WLK     CPLCR  +   D  +  H
Subjt:  IRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDIVAGYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCTCTCCGAGTTCTTCTCCCACCTCCACACAATGACCGCAGTCTTCTTCACCCTTTTACTTCTCGAATTCGTTATTCTCATTCGTACCATCTTCGGCTTGAG
ACCTAACGCCGACAAGCGCATAATCACGACGGCGCAGTTTTTGAAACTCATCGAAGAGAAGAATCCCACGATCCGATTCTCCAATAAGGTCACCGCAAGTTTTGCCGATC
AGTGTGCCGTTTGCCTCTCTGAATTTGAGGAAGGGGAGAAGGTACGGAAATTGCAATGCAACCACACTTTTCATAAGGATTGCCTCGATAATTGGTTAAAACTCTGTTTC
GCTACTTGTCCGCTTTGCCGTAGTAAGGTTTTGCCGGACGATATCGTCGCCGGCTACCACAGACTGCGAGACCGTGTAGAGTACGACGGCAGTGACGAGGAGCTCATCTT
TTTGTTATCGGCATTACATGGGACATCCAATTTACATCTTGACGGGGACCTTTGTCCCAATAACACCGCTGAAATCCGCTCTAAAATCATTCAAATCACAACAACTTTCT
CCATCCGGGAGTTTACTTGGGTTAATCTCGAAGGATCTATTAAAAAATTCAAGATATTAGTTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTCTCTCCGAGTTCTTCTCCCACCTCCACACAATGACCGCAGTCTTCTTCACCCTTTTACTTCTCGAATTCGTTATTCTCATTCGTACCATCTTCGGCTTGAG
ACCTAACGCCGACAAGCGCATAATCACGACGGCGCAGTTTTTGAAACTCATCGAAGAGAAGAATCCCACGATCCGATTCTCCAATAAGGTCACCGCAAGTTTTGCCGATC
AGTGTGCCGTTTGCCTCTCTGAATTTGAGGAAGGGGAGAAGGTACGGAAATTGCAATGCAACCACACTTTTCATAAGGATTGCCTCGATAATTGGTTAAAACTCTGTTTC
GCTACTTGTCCGCTTTGCCGTAGTAAGGTTTTGCCGGACGATATCGTCGCCGGCTACCACAGACTGCGAGACCGTGTAGAGTACGACGGCAGTGACGAGGAGCTCATCTT
TTTGTTATCGGCATTACATGGGACATCCAATTTACATCTTGACGGGGACCTTTGTCCCAATAACACCGCTGAAATCCGCTCTAAAATCATTCAAATCACAACAACTTTCT
CCATCCGGGAGTTTACTTGGGTTAATCTCGAAGGATCTATTAAAAAATTCAAGATATTAGTTAGTTAG
Protein sequenceShow/hide protein sequence
MGALSEFFSHLHTMTAVFFTLLLLEFVILIRTIFGLRPNADKRIITTAQFLKLIEEKNPTIRFSNKVTASFADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCF
ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGTSNLHLDGDLCPNNTAEIRSKIIQITTTFSIREFTWVNLEGSIKKFKILVS