; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G073430 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G073430
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:29697040..29698984
RNA-Seq ExpressionCcUC04G073430
SyntenyCcUC04G073430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038881745.1 uncharacterized protein LOC120073162 [Benincasa hispida]2.3e-3658.86Show/hide
Query:  AKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTGYGTNMSHLRSSDC
        AKLDPQGNGLAFLV LSH SINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLI AHVASHSL PHRQPTG                           
Subjt:  AKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTGYGTNMSHLRSSDC

Query:  DKAVAALIKMSFESRSKRVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYV
                        K VWI  +  K     G  +FP K  QS HLPLARGLVDGYV
Subjt:  DKAVAALIKMSFESRSKRVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTTTGTGAAATTGAGCTTGCTTTTGACCTGTCGCCTGATTCCTTGGCAGCGAAGCTCGACCCTCAAGGGAATGGGTTGGCTTTCTTGGTGCTTCTGTCG
CATGCATCCATAAACAAATTAAGGGGAGCTGATGTGCTTGGAAAGTTGTCATTAATTTGGTTTTATCTTCAAGATTCTCCGAGCTGTCACTTTTCTCTTGGTGTC
TGGTTGCTGATCCGCGCTCACGTTGCTAGCCACTCACTCATCCCCCACCGCCAGCCTACAGGTTCGAGCTTTATTTTCTTAATTATTTTAATCTTATTGACTGGA
TATGGAACTAATATGAGCCATCTAAGATCATCAGATTGTGACAAGGCAGTGGCTGCTCTTATTAAGATGTCATTTGAATCCCGTAGTAAGAGGGTTTGGATTCAG
CCAAGCCAAGTCAAGCCAAGGCAATGGAAAGGGGGGCAGTATTTTCCCCTCAAAAGGCCACAGAGTTGGCACTTGCCACTTGCCAGGGGTCTGGTGGATGGCTAT
GTTGGGTATGTGTTGTGTGTTGAAGTGAGAATGTGGCCATCTATAAGTCCAAAACTGTCAGGTACTATAGCTGTTACATTTTCACAAAGGCCAAACTGGAAATGC
AAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTTTTGTGAAATTGAGCTTGCTTTTGACCTGTCGCCTGATTCCTTGGCAGCGAAGCTCGACCCTCAAGGGAATGGGTTGGCTTTCTTGGTGCTTCTGTCG
CATGCATCCATAAACAAATTAAGGGGAGCTGATGTGCTTGGAAAGTTGTCATTAATTTGGTTTTATCTTCAAGATTCTCCGAGCTGTCACTTTTCTCTTGGTGTC
TGGTTGCTGATCCGCGCTCACGTTGCTAGCCACTCACTCATCCCCCACCGCCAGCCTACAGGTTCGAGCTTTATTTTCTTAATTATTTTAATCTTATTGACTGGA
TATGGAACTAATATGAGCCATCTAAGATCATCAGATTGTGACAAGGCAGTGGCTGCTCTTATTAAGATGTCATTTGAATCCCGTAGTAAGAGGGTTTGGATTCAG
CCAAGCCAAGTCAAGCCAAGGCAATGGAAAGGGGGGCAGTATTTTCCCCTCAAAAGGCCACAGAGTTGGCACTTGCCACTTGCCAGGGGTCTGGTGGATGGCTAT
GTTGGGTATGTGTTGTGTGTTGAAGTGAGAATGTGGCCATCTATAAGTCCAAAACTGTCAGGTACTATAGCTGTTACATTTTCACAAAGGCCAAACTGGAAATGC
AAATGA
Protein sequenceShow/hide protein sequence
MCFCEIELAFDLSPDSLAAKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTG
YGTNMSHLRSSDCDKAVAALIKMSFESRSKRVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYVGYVLCVEVRMWPSISPKLSGTIAVTFSQRPNWKC
K