; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G076100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G076100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:31399106..31403133
RNA-Seq ExpressionCcUC04G076100
SyntenyCcUC04G076100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN27475.1 unknown [Zea mays]2.4e-1329.18Show/hide
Query:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGLFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPPDVPKSATFTLIS
        HNVAE+RP RR+RRP  L Q  +++            LL  G   LH  H L+R+++ G+LP+H+ +AVH++ A + LLL HLRRHPP     A   L  
Subjt:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGLFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPPDVPKSATFTLIS

Query:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-MRMKF
          ++   ++  L            L + +    ++ +E      L   +L    D+   +      Q  G  L          H      +H + +  + 
Subjt:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-MRMKF

Query:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
         L+ VG+ E  ++G+  +ELLLE G+  L  + ++HHLH +G+LLV++ V     +R
Subjt:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
TrEMBL top hitse value%identityAlignment
C0P3A9 Uncharacterized protein1.1e-1329.18Show/hide
Query:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGLFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPPDVPKSATFTLIS
        HNVAE+RP RR+RRP  L Q  +++            LL  G   LH  H L+R+++ G+LP+H+ +AVH++ A + LLL HLRRHPP     A   L  
Subjt:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGLFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPPDVPKSATFTLIS

Query:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-MRMKF
          ++   ++  L            L + +    ++ +E      L   +L    D+   +      Q  G  L          H      +H + +  + 
Subjt:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-MRMKF

Query:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
         L+ VG+ E  ++G+  +ELLLE G+  L  + ++HHLH +G+LLV++ V     +R
Subjt:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
J3MG37 Uncharacterized protein6.3e-0436Show/hide
Query:  IYSVIMQYTGGFLQAAMNC--------------TTNSHEFNIHNKMRMKFYLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTV
        +YSV+MQYTGGFL AAMNC              T    E    ++      L+ VG+ E  ++G+  +EL+LE G+  L  + ++ HL  +G+LLV++ V
Subjt:  IYSVIMQYTGGFLQAAMNC--------------TTNSHEFNIHNKMRMKFYLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCACCACAATGTCGCTGAAATCCGGCCGCTTCGACGGATTCGCCGCCCAACACCGCTTTATCAGAAGTATCAAAATCAGTATTACTTGTGGAACGGGTTGTTCGA
GATTTGGTACCTTCTCGGCGACGGCAAAGGCAGCTTGCACGGGGGTCATCCCTTGAAACGGAAGCAGAGCCGTGGTAAGCTCCCACAGCACAATCCCAAAGCTGTACACA
TCAACTTTGCGAGTATAAGGCTTCTCCTTGATCATCTCCGGCGCCATCCACCGGATGTTCCGAAATCGGCTACTTTTACTCTCATTTCATCATTTAGAAGCAAGTTGTTT
GATTTGAGGTCTCTGTGGATTACTCCTTGGGAATGGAGGTATTCCATTCCTCTTGATATGTCAAGAGCTAACCTCAATATTGTTTCTGTTGAGAGTGAATATGGCTCTTT
CTTGTTAAGATACATCCTCAGAGTTCCTTGTGACATATACTCTGTAATTATGCAGTATACAGGTGGCTTTTTACAGGCTGCAATGAACTGTACAACAAACAGCCATGAAT
TTAACATTCATAACAAGATGAGGATGAAATTTTACCTGAACTATGTTGGGATGAAAGAGACGAGAAAGCAAGGCAACTTCAGACTTGAACTGTTGCTCGAGTTTGGCTCT
TGTTTCCTCTTTTTGGTTTGGAATTCTCACCATCTTCACAGCAACGGCTCTCTGCTTGTAAATTCCACGGTTTCCACATTTTCAGACTCTAGGATCATTGACCACGATTC
CAAACTATCAAATCTTCTCCTTTCCATATTTTCCATTTCAGAATTCATCTGGGATTTCAACGAGGAAGGGGTTGATAAGGGTTTGCTCTTCGATTTCCGAATCCTAAGTG
AACCGAAACATGAGGTCGCCATGAAGATTCTTTACGTGAAATGGACTTTGTCTATACCGAACAGAGGCTTGTTTTTATGTCACAAAGCAAACAATCTTGGAAAGTGGAGT
AATTGTCTACCAAACTGTGGCAATAACATAACAATTCTTTTCACTATTGGAAATCATTCTCTCACAATTCAAGAGCAGAAATTTAGAACATGTATCAAAAATGGAGCTGG
CCCAAGGACTTTTGACCCATTTCTGAAAGGCAAGCTTCAAGCCCATGAGGCATGTCTTAGGCACAAGGGAGCTCTTGGAGTCTGTGCATCCCAAAGAGGGAAGATATGGC
CTCGTACCCTAGGTTTGGCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCACCACAATGTCGCTGAAATCCGGCCGCTTCGACGGATTCGCCGCCCAACACCGCTTTATCAGAAGTATCAAAATCAGTATTACTTGTGGAACGGGTTGTTCGA
GATTTGGTACCTTCTCGGCGACGGCAAAGGCAGCTTGCACGGGGGTCATCCCTTGAAACGGAAGCAGAGCCGTGGTAAGCTCCCACAGCACAATCCCAAAGCTGTACACA
TCAACTTTGCGAGTATAAGGCTTCTCCTTGATCATCTCCGGCGCCATCCACCGGATGTTCCGAAATCGGCTACTTTTACTCTCATTTCATCATTTAGAAGCAAGTTGTTT
GATTTGAGGTCTCTGTGGATTACTCCTTGGGAATGGAGGTATTCCATTCCTCTTGATATGTCAAGAGCTAACCTCAATATTGTTTCTGTTGAGAGTGAATATGGCTCTTT
CTTGTTAAGATACATCCTCAGAGTTCCTTGTGACATATACTCTGTAATTATGCAGTATACAGGTGGCTTTTTACAGGCTGCAATGAACTGTACAACAAACAGCCATGAAT
TTAACATTCATAACAAGATGAGGATGAAATTTTACCTGAACTATGTTGGGATGAAAGAGACGAGAAAGCAAGGCAACTTCAGACTTGAACTGTTGCTCGAGTTTGGCTCT
TGTTTCCTCTTTTTGGTTTGGAATTCTCACCATCTTCACAGCAACGGCTCTCTGCTTGTAAATTCCACGGTTTCCACATTTTCAGACTCTAGGATCATTGACCACGATTC
CAAACTATCAAATCTTCTCCTTTCCATATTTTCCATTTCAGAATTCATCTGGGATTTCAACGAGGAAGGGGTTGATAAGGGTTTGCTCTTCGATTTCCGAATCCTAAGTG
AACCGAAACATGAGGTCGCCATGAAGATTCTTTACGTGAAATGGACTTTGTCTATACCGAACAGAGGCTTGTTTTTATGTCACAAAGCAAACAATCTTGGAAAGTGGAGT
AATTGTCTACCAAACTGTGGCAATAACATAACAATTCTTTTCACTATTGGAAATCATTCTCTCACAATTCAAGAGCAGAAATTTAGAACATGTATCAAAAATGGAGCTGG
CCCAAGGACTTTTGACCCATTTCTGAAAGGCAAGCTTCAAGCCCATGAGGCATGTCTTAGGCACAAGGGAGCTCTTGGAGTCTGTGCATCCCAAAGAGGGAAGATATGGC
CTCGTACCCTAGGTTTGGCTAGTTGA
Protein sequenceShow/hide protein sequence
MAHHNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGLFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPPDVPKSATFTLISSFRSKLF
DLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIMQYTGGFLQAAMNCTTNSHEFNIHNKMRMKFYLNYVGMKETRKQGNFRLELLLEFGS
CFLFLVWNSHHLHSNGSLLVNSTVSTFSDSRIIDHDSKLSNLLLSIFSISEFIWDFNEEGVDKGLLFDFRILSEPKHEVAMKILYVKWTLSIPNRGLFLCHKANNLGKWS
NCLPNCGNNITILFTIGNHSLTIQEQKFRTCIKNGAGPRTFDPFLKGKLQAHEACLRHKGALGVCASQRGKIWPRTLGLAS