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CcUC04G076540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G076540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionExpression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.
Genome locationCicolChr04:31727828..31728187
RNA-Seq ExpressionCcUC04G076540
SyntenyCcUC04G076540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3771.43Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---
        MGNCCRGQSSTP +   NRR  P KN RQR+ G SS  CS+T K  KEGN+RE+KIRMTKKEL+ELVGWLNMADSSFE VMARLV+VIS+QNG++++   
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---

Query:  ----QMVKLRQQCSWRPSLQSIPEII
            QMVKLRQQ SWRPSLQSIPEII
Subjt:  ----QMVKLRQQCSWRPSLQSIPEII

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3771.43Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---
        MGNCCRGQSSTP +   NRR  P KN RQR+ G SS  CS+T K  KEGN+RE+KIRMTKKEL+ELVGWLNMADSSFE VMARLV+VIS+QNG++++   
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---

Query:  ----QMVKLRQQCSWRPSLQSIPEII
            QMVKLRQQ SWRPSLQSIPEII
Subjt:  ----QMVKLRQQCSWRPSLQSIPEII

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]4.7e-3975.83Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM
        MGNCC+GQ STP     +RRTPP KNHRQR+    S  CS      KE NLREVKIRMTKKELEELVGWLNMADSSFEHVMARLV+VI+DQNG+ NNDQ+
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM

Query:  VKLRQQCSWRPSLQSIPEII
        VKLRQQ SWRPSLQSIPEII
Subjt:  VKLRQQCSWRPSLQSIPEII

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]2.3e-3873.02Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNG-------
        MGNCCRGQSSTP +  G+RR  P KN RQR+ G  S  CS+T K  KEGNLRE+KIRMTKKEL+EL+GWLNMADSSFE VMARLV+VISDQNG       
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNG-------

Query:  ENNDQMVKLRQQCSWRPSLQSIPEII
        EN  QMVKLRQQ SWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQCSWRPSLQSIPEII

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]1.7e-3669.84Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---
        MGNCCRGQSSTP +  G+RR  P KN  QR+ G +S  CS+T K  KEGNLRE+KIRMTKKEL+ELVGWLNMADSSFE VMARLV+VIS+ NG++++   
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENND---

Query:  ----QMVKLRQQCSWRPSLQSIPEII
            QMVKLRQQ SWRPSLQSIPEII
Subjt:  ----QMVKLRQQCSWRPSLQSIPEII

TrEMBL top hitse value%identityAlignment
A0A0A0KHU7 Uncharacterized protein1.3e-3469.17Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM
        MGNCC+ QSSTP ME  +  TPP+KNH QR+         + +   KE NLREVKIRMTKKEL+ELVGWLNMADSSFE VMARLV+VI+ QNG+ NNDQ+
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM

Query:  VKLRQQCSWRPSLQSIPEII
        VKLRQQ SWRPSLQSIPE+I
Subjt:  VKLRQQCSWRPSLQSIPEII

A0A1S3B2N5 uncharacterized protein LOC1034853262.3e-3975.83Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM
        MGNCC+GQ STP     +RRTPP KNHRQR+    S  CS      KE NLREVKIRMTKKELEELVGWLNMADSSFEHVMARLV+VI+DQNG+ NNDQ+
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM

Query:  VKLRQQCSWRPSLQSIPEII
        VKLRQQ SWRPSLQSIPEII
Subjt:  VKLRQQCSWRPSLQSIPEII

A0A438EDR4 Uncharacterized protein4.6e-0847.95Show/hide
Query:  PKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENNDQMVKLRQQCSWRPSLQSIPEI
        P+  + REVKI++TKKELEEL+  ++M   + EHV+A+L+      NG +ND+    ++Q SWRP+LQSIPE+
Subjt:  PKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENNDQMVKLRQQCSWRPSLQSIPEI

A0A5D3CNX5 Uncharacterized protein2.3e-3975.83Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM
        MGNCC+GQ STP     +RRTPP KNHRQR+    S  CS      KE NLREVKIRMTKKELEELVGWLNMADSSFEHVMARLV+VI+DQNG+ NNDQ+
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGE-NNDQM

Query:  VKLRQQCSWRPSLQSIPEII
        VKLRQQ SWRPSLQSIPEII
Subjt:  VKLRQQCSWRPSLQSIPEII

A0A6J1IM02 uncharacterized protein LOC1114776811.1e-3873.02Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNG-------
        MGNCCRGQSSTP +  G+RR  P KN RQR+ G  S  CS+T K  KEGNLRE+KIRMTKKEL+EL+GWLNMADSSFE VMARLV+VISDQNG       
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNG-------

Query:  ENNDQMVKLRQQCSWRPSLQSIPEII
        EN  QMVKLRQQ SWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQCSWRPSLQSIPEII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.1.1e-0429.23Show/hide
Query:  MGNCCRGQSST--PAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNL----------REVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVI
        MGNC R +S       ++    T   ++H         +Y S T +D K   +           E+KIR+TKK+L +L+  +N+ D +F+        + 
Subjt:  MGNCCRGQSST--PAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNL----------REVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVI

Query:  SDQNGENNDQMVKLRQQCSWRPSLQSIPEI
              NN    +  QQ  WRP LQSIPE+
Subjt:  SDQNGENNDQMVKLRQQCSWRPSLQSIPEI

AT4G21920.1 unknown protein1.6e-0529.55Show/hide
Query:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKP--------------GGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVD
        MGNC      T     G+      K  R+R+               G +S   S++     E   RE+KIR+TKKELE+L+  + +   + E ++++L+ 
Subjt:  MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKP--------------GGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVD

Query:  VISDQNGENNDQMVKLRQQCSWRPSLQSIPEI
           DQ G +   +    Q   W+P LQSIPE+
Subjt:  VISDQNGENNDQMVKLRQQCSWRPSLQSIPEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGCGATGGAATACGGCAACCGGAGGACTCCGCCGTGGAAGAACCACCGTCAGAGAAAGCCTGGAGGTAGTTCTTA
TTATTGTTCTAGTACGGACAAGGATCCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGG
ATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTGACGTTATTAGCGATCAAAACGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAACAATGTTCATGGAGACCT
TCTCTACAAAGCATCCCTGAGATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGCGATGGAATACGGCAACCGGAGGACTCCGCCGTGGAAGAACCACCGTCAGAGAAAGCCTGGAGGTAGTTCTTA
TTATTGTTCTAGTACGGACAAGGATCCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGG
ATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTGACGTTATTAGCGATCAAAACGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAACAATGTTCATGGAGACCT
TCTCTACAAAGCATCCCTGAGATAATTTGA
Protein sequenceShow/hide protein sequence
MGNCCRGQSSTPAMEYGNRRTPPWKNHRQRKPGGSSYYCSSTDKDPKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVDVISDQNGENNDQMVKLRQQCSWRP
SLQSIPEII