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CcUC04G076590 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G076590
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPatatin
Genome locationCicolChr04:31746004..31746351
RNA-Seq ExpressionCcUC04G076590
SyntenyCcUC04G076590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603769.1 hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4885.22Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRSLSEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA  RSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
XP_008441098.1 PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo]8.0e-5291.38Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +AL RSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
XP_011658506.1 uncharacterized protein LOC105436036 [Cucumis sativus]6.7e-5189.66Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +AL RSDS+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]3.1e-4884.35Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA  RSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]2.4e-5695.65Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSH I+ DAL RSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGFGYRILKDDFPI
Subjt:  IPGFGYRILKDDFPI
TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein3.3e-5189.66Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +AL RSDS+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A1S3B3D8 uncharacterized protein LOC1034853253.9e-5291.38Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +AL RSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A5D3CRM5 Uncharacterized protein3.9e-5291.38Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +AL RSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A6J1EEE9 uncharacterized protein LOC1114335713.7e-4782.2Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        +SRS S SE+MG VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGS  ++ DA  RSDSK SFWLLSL+WKWKKR+ NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDD---FPI
        IPGFGYRILKDD   FPI
Subjt:  IPGFGYRILKDD---FPI
A0A6J1IJL8 uncharacterized protein LOC1114776861.5e-4884.35Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA  RSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein1.3e-1543.12Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHGGSHIINADAL---TRSDSKGSFWLLSLTWKWKKRKNNNG---ILPNICSAVEFSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF        + +   G+   N +      RS S+   W     W+ KKR+   G     P++CSAVE S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHGGSHIINADAL---TRSDSKGSFWLLSLTWKWKKRKNNNG---ILPNICSAVEFSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCAC
CAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGACAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGA
AGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATTTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAA
GATGACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCAC
CAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGACAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGA
AGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATTTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAA
GATGACTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALTRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILK
DDFPI