CuGenDBv2

Gene ID	CcUC04G077010
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	CicolChr04:31999092..31999463
RNA-Seq Expression	CcUC04G077010
Synteny	CcUC04G077010
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QBK38981.1 photosystem I P700 chlorophyll a apoprotein A2 [Schima superba]

8.2e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

QTW91178.1 photosystem I P700 apoprotein A2 [Bryocarpum himalaicum]

8.2e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

YP_009571515.1 photosystem I P700 apoprotein A2 [Mirabilis jalapa]

8.2e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

YP_009756194.1 photosystem I P700 chlorophyll a apoprotein A2 [Gymnema sylvestre]

8.2e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

YP_009945416.1 photosystem I P700 apoprotein A2 [Sechium edule]

8.2e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

TrEMBL top hits

e value

%identity

Alignment

A0A075TWB4 Photosystem I P700 chlorophyll a apoprotein A2

4.0e-63

98.37

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

A0A0K1Z9H8 Photosystem I P700 chlorophyll a apoprotein A2

4.0e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

A0A218KG43 Photosystem I P700 chlorophyll a apoprotein A2

4.0e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

A0A221HRZ1 Photosystem I P700 chlorophyll a apoprotein A2

4.0e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

U3R6G8 Photosystem I P700 chlorophyll a apoprotein A2

4.0e-63

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

SwissProt top hits

e value

%identity

Alignment

A0A334 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-65

98.37

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

P06512 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-65

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

P56767 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-65

97.56

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNA+NENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-65

98.37

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Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-65

98.37

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.0e-66

97.56

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWASLFLGFHTLGLYVHNDV+LAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNA+NENSNSLFL
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGLGDFLVHHAIALGLHTTTLI
        TIG GDFLVHHAIALGLHTTTLI
Subjt:  TIGLGDFLVHHAIALGLHTTTLI

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.2e-21

41.86

Show/hide

Query:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQ-----ILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWLNAVNEN
        +L H++AIISHL+W  +FLGFH+ GLY+HND + A G P+       I ++P+FAQWIQ+ H         L    + P   A  S+ W  G L AV   
Subjt:  MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQ-----ILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWLNAVNEN

Query:  SNSLFLTIGLGDFLVHHAIALGLHTTTLI
           L + +G  DFLVHH  A  +H T LI
Subjt:  SNSLFLTIGLGDFLVHHAIALGLHTTTLI

Sequences

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CDS sequence

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ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAGCCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCGTGCTTGCTTTTGG
TACTCCGGAAAAACAAATCTTAATCGAACCGATATTTGCCCAATGGATTCAATCCGCTCATGGTAAAACTTCATATGGCTTCGATGTACTTTTATCTTCAACAAGCGGCC
CGGCGTTCAATGCGGGTCGAAGCATATGGTTGCCAGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGGGCTCGGAGACTTCTTGGTTCAT
CATGCTATTGCTTTAGGGTTACATACAACTACATTGATTTGA

mRNA sequence

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Protein sequence

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MLDHKEAIISHLSWASLFLGFHTLGLYVHNDVVLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGLGDFLVH
HAIALGLHTTTLI

CcUC04G077010 (gene) of Watermelon (PI 537277) v1 genome