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CcUC04G077480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G077480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCicolChr04:32276221..32277005
RNA-Seq ExpressionCcUC04G077480
SyntenyCcUC04G077480
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4348561.1 hypothetical protein F8388_000240 [Cannabis sativa]1.4e-2872.34Show/hide
Query:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        HGYNFI INRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+ED+TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FIL
Subjt:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

KAF4358366.1 hypothetical protein G4B88_017243 [Cannabis sativa]1.1e-2871.58Show/hide
Query:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        HGYNFI INRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+ED+TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FIL+
Subjt:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

KAG4109460.1 hypothetical protein ERO13_1Z050580v2 [Gossypium hirsutum]5.5e-2871.28Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        GYNFILINRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+E++TKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      F+LA
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

QIB71716.1 ClpP [Epipremnum aureum]3.2e-2872.04Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        GYNF+LINRLYRE LLFLGQE+D+E+SNQL+GLMVYLS+ED+TKDLYLFINSPGGWV+PGIAIYDTMQFV        T CM +      FIL
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

XP_033517031.1 ATP-dependent Clp protease proteolytic subunit-like [Nicotiana tomentosiformis]4.2e-2873.12Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        GYNF LINRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+EDETKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      FIL
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

TrEMBL top hitse value%identityAlignment
A0A1U8M142 ATP-dependent Clp protease proteolytic subunit2.7e-2871.28Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        GYNFILINRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+E++TKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      F+LA
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

A0A1Y0B4Y8 ATP-dependent Clp protease proteolytic subunit3.5e-2871.28Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        GYNF LINRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+E++TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FILA
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

A0A6C0U9J7 ATP-dependent Clp protease proteolytic subunit1.6e-2872.04Show/hide
Query:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        GYNF+LINRLYRE LLFLGQE+D+E+SNQL+GLMVYLS+ED+TKDLYLFINSPGGWV+PGIAIYDTMQFV        T CM +      FIL
Subjt:  GYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

A0A7J6DR23 ATP-dependent Clp protease proteolytic subunit7.0e-2972.34Show/hide
Query:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        HGYNFI INRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+ED+TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FIL
Subjt:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

A0A7J6EJ45 ATP-dependent Clp protease proteolytic subunit5.4e-2971.58Show/hide
Query:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        HGYNFI INRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+ED+TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FIL+
Subjt:  HGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

SwissProt top hitse value%identityAlignment
P12210 ATP-dependent Clp protease proteolytic subunit2.2e-2772.09Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        NRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+EDETKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      FIL
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

Q09FT6 ATP-dependent Clp protease proteolytic subunit2.2e-2772.09Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        NRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+EDETKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      FIL
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

Q0G9T7 ATP-dependent Clp protease proteolytic subunit3.7e-2770.11Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        NRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+E++TKDLYLFINSPGGWV+PG+AIYDTMQFV       +T CM +      FILA
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

Q33C07 ATP-dependent Clp protease proteolytic subunit2.2e-2772.09Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        NRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+EDETKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      FIL
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

Q3C1K4 ATP-dependent Clp protease proteolytic subunit2.2e-2772.09Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL
        NRLYRE LLFLGQE+D+E+SNQLIGLMVYLS+EDETKDLYLFINSPGGWV+PG+AIYDTMQFV        T CM +      FIL
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFIL

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 56.1e-0935.38Show/hide
Query:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFV
        +I++L++  ++  G  +D +++N ++  ++YL   D TKD+ +++NSPGG V  G+AI+DTM+ +
Subjt:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFV

AT1G12410.1 CLP protease proteolytic subunit 21.8e-1349.18Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQ
        N LYRE ++F+GQ ID E SNQ++  M+YL   D+++ +Y+++N PGG + P +AIYDTM+
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQ

AT1G66670.1 CLP protease proteolytic subunit 31.0e-0834.48Show/hide
Query:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA
        N L R+ ++FLG ++D   ++ +I  ++ L  ED  +D+ LFINSPGG +  G+ IYD M+          T C+ +      F+LA
Subjt:  NRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILA

AT5G23140.1 nuclear-encoded CLP protease P76.1e-0935.38Show/hide
Query:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFV
        + +RL +E ++ +   I+ + S+ ++  ++YL  E+ +K +++++NSPGG V  G+AIYDTMQ++
Subjt:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFV

ATCG00670.1 plastid-encoded CLP P9.3e-2662.77Show/hide
Query:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILAPIATT
        + NRLYRE L FLGQE+DTE+SNQLI LM+YLS+E +TKDLYLFINSPGGWV+ G+AIYDTMQFV       +T CM +      FIL   A T
Subjt:  LINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILAPIATT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCATGGATACAATTTTATCCTAATCAACCGACTTTATCGAGAAATATTACTTTTTTTAGGCCAAGAGATTGATACCGAGCTCTCGAATCAACTTATTGGTCTTAT
GGTATATCTCAGTATGGAGGATGAGACCAAAGATCTGTATTTATTTATAAACTCTCCCGGTGGATGGGTACTACCTGGAATAGCTATTTATGATACTATGCAATTTGTGT
TTGTTTTCGCCATATCCAACAAAACGTCATGCATGCATATAAGAAGAAGGCAAACAAAATTCATTCTAGCGCCCATAGCAACAACATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCATGGATACAATTTTATCCTAATCAACCGACTTTATCGAGAAATATTACTTTTTTTAGGCCAAGAGATTGATACCGAGCTCTCGAATCAACTTATTGGTCTTAT
GGTATATCTCAGTATGGAGGATGAGACCAAAGATCTGTATTTATTTATAAACTCTCCCGGTGGATGGGTACTACCTGGAATAGCTATTTATGATACTATGCAATTTGTGT
TTGTTTTCGCCATATCCAACAAAACGTCATGCATGCATATAAGAAGAAGGCAAACAAAATTCATTCTAGCGCCCATAGCAACAACATCATAA
Protein sequenceShow/hide protein sequence
MGHGYNFILINRLYREILLFLGQEIDTELSNQLIGLMVYLSMEDETKDLYLFINSPGGWVLPGIAIYDTMQFVFVFAISNKTSCMHIRRRQTKFILAPIATTS