; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G077670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G077670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationCicolChr04:32392176..32399550
RNA-Seq ExpressionCcUC04G077670
SyntenyCcUC04G077670
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]4.7e-24997.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]2.1e-24997.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]7.3e-25097.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]4.7e-24997.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]2.9e-25198Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPMFQANLQKLLIHGEVLAREPMP+NITVRLPSLEEL+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 21.0e-24997.12Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 21.7e-23692.36Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNP FQANLQKLLIHGEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 21.4e-24389.21Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+A SMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLI+GEVLAREPMPSNITVRLPSLE+LEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA+QIVTFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 21.2e-24796.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLI GEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 23.5e-25097.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A SMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNP FQANLQKLLIHGEVLAREPMPSNITVRLP+LEELEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV AITKESLYNAFKNGITA QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 41.0e-6834Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP+F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQA

Query:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 43.4e-6933.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP+F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Q54C29 General transcription factor IIH subunit 44.8e-6331.19Show/hide
Query:  VASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDA-PVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFI------------------------
        +ASL +  L++LY++ + C+AILRSLPP +K+++L+ML +D  P+S    ++W     + ++K ++ +L  L++                          
Subjt:  VASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDA-PVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFI------------------------

Query:  ---ETADRKRETTYRLNPMFQANLQKLLIH-GEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE
           +   ++ E T RLNP+FQ N+++ L+   +V+           + PS+++L++Y+  QWE  L  L  S    +PS + S ++       L++++ +
Subjt:  ---ETADRKRETTYRLNPMFQANLQKLLIH-GEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKE

Query:  APRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK
           +T  GF+FLL +   Q+W ++  Y+ + E++         DL+SFL  LSF   G  Y +  L+E+Q+  +  L   GL+ +   R DS   F PT+
Subjt:  APRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK

Query:  ----LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRV
            L T  ++SL  S S       ++QG++V+ETN+R+YAY+SS L   +L LF ++ Y+LPNL V  IT+ES+  A  +GITADQI+ F++ N+HP  
Subjt:  ----LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRV

Query:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR
        A     +P+ V +QI LWE++ NR+  T +  Y+ FP+ + + A   +A+E +  +W       LVVK + +  +R  +++
Subjt:  AERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR

Q680U9 General transcription and DNA repair factor IIH subunit TFB21.7e-20979.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 43.4e-6933.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRL

Query:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP+F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPMFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++VA +T+ES+  A  +GITA QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related1.2e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related1.2e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related1.2e-21079.11Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV AT MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY

Query:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNP FQ NLQK +I G VL REPM S+  ++LPSL+ELE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPMFQANLQKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT+DQI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCGCTGGCTAAGAAGTTTGTTTTACAAATGCTATACATTGATGCTCCAGTTTCAGCCACGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAATGTTCCAAGCAAACCTC
CAAAAACTTCTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCGAGTTTGGAAGAACTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAACCATCAAACATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGGGAATATATATCTAACTCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCCACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAA
GGAAACAGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTGCGTCTTTTTTCGAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGCAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACCGCAGACCAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTTGAGGCTGCGTGCGACTACGCACGAGAATGGAATGGATTGCTATGGGAGGATTCGAAGAACATGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGGGAACATCTTCGGCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCGCTGGCTAAGAAGTTTGTTTTACAAATGCTATACATTGATGCTCCAGTTTCAGCCACGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAATGTTCCAAGCAAACCTC
CAAAAACTTCTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCGAGTTTGGAAGAACTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAACCATCAAACATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGGGAATATATATCTAACTCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCCACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAA
GGAAACAGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTGCGTCTTTTTTCGAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGCAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACCGCAGACCAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTTGAGGCTGCGTGCGACTACGCACGAGAATGGAATGGATTGCTATGGGAGGATTCGAAGAACATGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGGGAACATCTTCGGCGTCAAAAGTAG
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSATSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQANL
QKLLIHGEVLAREPMPSNITVRLPSLEELEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERG
VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQL
PNLIVAAITKESLYNAFKNGITADQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIH
THMREHLRRQK