CuGenDBv2

Gene ID	CcUC04G078030
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Glycogen phosphorylase 1-like
Genome location	CicolChr04:32638355..32638819
RNA-Seq Expression	CcUC04G078030
Synteny	CcUC04G078030
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052667.1 uncharacterized protein E6C27_scaffold120G002770 [Cucumis melo var. makuwa]

7.1e-80

92.86

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILL P TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_004134687.2 uncharacterized protein LOC101221431 [Cucumis sativus]

5.8e-82

94.81

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEEAPWPQKLQALTHILL PTTAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_008439813.1 PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo]

7.1e-80

92.86

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILL P TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_023517994.1 uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo]

1.2e-76

89.61

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE+PWPQKLQ LTHILL PTTAPPLASQYF+ATKIPCYLNWDYPPLLCPK SIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCP+Q PPP ILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V+ AQW DEQR  YVRMRLRRKRLGSDVHPLIPI+IPNMLLFSLLLWNP SS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

XP_038883097.1 uncharacterized protein LOC120074151 [Benincasa hispida]

6.4e-81

94.81

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PWPQKLQALTHILL PTTAPPLASQY IATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH+AQW DEQR NYVRMRLRRKRL SDVHPLIPIMIPNMLLFSLLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK88 Uncharacterized protein

2.8e-82

94.81

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEEAPWPQKLQALTHILL PTTAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A1S3B097 uncharacterized protein LOC103484499

3.4e-80

92.86

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILL P TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A5A7UDV0 Uncharacterized protein

3.4e-80

92.86

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE PW QKLQALTHILL P TAPPLASQ+FIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        VH AQWDDEQR NY RMRLRRKRLGSDVHPLIPIMIPNMLLF+LLLWNPFSS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A6J1EGM1 uncharacterized protein LOC111433914

6.7e-76

88.96

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        MEE+PWPQKLQ LTHILL PTTAPPLASQYF+ATKIPCYLNWDYPPLLCPK SIFPF SLHLQWGFSLFLKRLSRF LPKTSWRSKCP+Q PPPLILAKG
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD
        V  AQW DEQR  YVRMRLRRKRLGSDVHPLIPI+IPNMLLFSLLLWNP SS D
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

A0A6J1IR68 uncharacterized protein LOC111478635

4.1e-73

87.5

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG
        ME+APW QKL+ALTHILL PTTAPPLASQ+FIATKIPCYLNWDYPPLLC K SIFPF SLHLQWGFSLFLKRLSR GLP TSWRSKCPYQLPPPL+LA+G
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKG

Query:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSS
        V  AQWDDEQR NYVRMRLRRKRLGSDV+PLIPIMIPNMLLF LLLW P SS
Subjt:  VHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G33855.1 unknown protein

3.7e-42

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Query:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHL-QWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAK
        MEE  W Q++QA+THIL  PTT P L SQ+FI   IP Y++WDYPP+  P          HL QW  S F KR+SRFGLP TSWRS  PY  PP  ++A 
Subjt:  MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHL-QWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAK

Query:  GVHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNP
        GV   +W  E+R  Y R RLRRKRL ++V+P IP+++PN+LLF+LLLW+P
Subjt:  GVHAAQWDDEQRTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGAAGCACCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTACTCTACCCCACCACCGCTCCGCCGCTCGCTTCTCAATACTTCATCGCCACCAAAATCCC
CTGTTACCTCAATTGGGACTACCCCCCTCTCCTCTGCCCTAAATCTTCCATTTTCCCCTTTCTCTCTCTTCACCTCCAATGGGGTTTTTCTCTCTTCCTCAAAAGACTCT
CCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCCTATCAACTCCCTCCACCTTTGATTCTCGCTAAAGGCGTCCACGCTGCTCAATGGGACGACGAACAG
AGGACAAACTACGTCAGAATGAGGCTCAGAAGAAAGCGTCTCGGCAGCGATGTTCATCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTCTCTTCTCCTATG
GAATCCATTTTCTTCCGACGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEAPWPQKLQALTHILLYPTTAPPLASQYFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKGVHAAQWDDEQ
RTNYVRMRLRRKRLGSDVHPLIPIMIPNMLLFSLLLWNPFSSDD

CcUC04G078030 (gene) of Watermelon (PI 537277) v1 genome